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7 protocols using squalene

1

Squalene Dissolution Protocol

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Squalene was purchased from Wako Co, Ltd. (Tokyo, Japan). For in vitro assays, Squalene was dissolved in medium and sonicated before use in the experiment because it was difficult to dissolve in the medium.
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2

Synthesis and Characterization of HH-Sq

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Squalene was purchased from Fujifilm Wako (Tokyo, Japan). Sq mono ethylene glycol derivative, (2-(2-hydroxyethoxy)-3-hydroxySqualene) (HH-Sq), was synthesized as reported previously (Sasaki et al., 2020 (link)) and identified by spectral data (Figure 1A).
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3

Squalene Dissolution for In Vitro Assays

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Squalene was purchased from Wako Co, Ltd. (Tokyo, Japan). For the in vitro assays, Squalene was dissolved in the medium before further experiment.
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4

Mevalonate Pathway Reverses Atorvastatin-Sensitive Phenotype

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To determine if metabolic intermediates of the mevalonate pathway or LDL treatment revert the cells’ atorvastatin-sensitive phenotype, the statin-sensitive cancer cell line HOP-92 was seeded in 12-well plates at a density of 1 × 105 cells/mL (1 mL/well), incubated overnight, and then treated with 10 μM atorvastatin and various concentrations of R-mevalonic acid (10–50 μM; Sigma-Aldrich, St. Louis, MO), ubiquinone (25–200 μM; Wako, Osaka, Japan), dolichol (75–300 μM; Avanti Polar Lipids, Alabaster, AL), squalene (10–100 μM; Wako), FPP (1–25 μM; Echelon, Salt Lake City, UT), GGPP (1–25 μM; Sigma-Aldrich), or LDL (50–200 μg/mL; Alfa Aesar, Ward Hill, MA) for 48 hours. We chose the doses of each substrate according to published references [53 (link), 54 (link)]. In select experiments, we photographed these cells with a phase-contrast microscope to capture any morphological changes. After the incubation, cells were harvested, and cell numbers were counted using a Scepter handheld automated cell counter (Millipore). Statistical analyses were performed using one-way ANOVA and Bonferroni-Dunn post-hoc tests. P values of less than 0.05 were considered statistically significant.
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5

Lipid Analysis of Human Skin Tissue

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Linoleic acid (1st Grade, Fujifilm Wako Pure Chemical Corporation, Osaka, Japan), squalene (Special Grade, Fujifilm Wako Pure Chemical Corporation, Osaka, Japan), and oleic acid (O0180, Tokyo Chemical Industry Co., Ltd., Tokyo, Japan) were selected as lipid samples. Human skin tissue derived from the abdomen of a 42-year-old Caucasian female was purchased from Biopredic International (Rennes, France) via KAC (Kyoto, Japan).
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6

Solvent Selection and Characterization

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The following 30 solvents (96.0%–99.0% pure) were used without purification: linear alkanes with different carbon chain length (n = 6–16); aromatic hydrocarbons; linear aliphatic alcohols with different carbon chain length (n = 1–9); aromatic alcohols with different carbon chain length of the alkyl group (n = 0–3); acetate esters; unsaturated hydrocarbons; and branched alkanes. Hexane, octane, nonane, decane, dodecane, tetradecane, hexadecane, toluene, styrene, methanol, ethanol, 1-heptanol, 1-octanol, 1,4-butanediol, benzyl alcohol, 2-phenylethanol, propyl acetate, iso -butyl acetate, tert -butyl acetate, butyl acetate, pentyl acetate, octyl acetate, 1-octadecene, and squalene were supplied by Wako Pure Chemical Industries, Ltd. (Osaka, Japan). Butylbenzene, tert-Butylbenzene, octylbenzene, 1-nonanol, and 3-phenyl-1-propanol were supplied by Tokyo Chemical Industry Co., Ltd. (Tokyo, Japan). Diluted ethane and ethylene (99.5% pure) and undiluted acetylene (0.1% in N2) were used as standard gases for gas chromatography. These gases were supplied by GL sciences Inc. (Tokyo, Japan). For the spin-trapping agent, we used 5,5-dimethyl-1-pyrroline N-oxide (DMPO; > 97.0% pure), which was supplied by Tokyo Chemical Industry Co., Ltd. (Tokyo, Japan).
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7

Quantitative Analysis of Sterols and Vitamins

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Methanol, acetonitrile, formic acid, ethyl acetate, n-hexane, squalene, vitamin D3, and 5-cholestane (internal standard, I.S., for ergosterol, brassicasterol, and cholesterol and its precursors) were purchased from FUJIFILM Wako Pure Chemical Corporation (Osaka, Japan). Lanosterol was purchased from Nagara Science Corporation (Gifu, Japan), and 7-dehydrocholesterol, desmosterol, lathosterol, cholesterol, and vitamin D2 were purchased from Sigma-Aldrich (St. Louis, MO, U.S.A.). Additionally, 25-
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