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4 protocols using goat anti nkx6

1

Immunostaining of Organoid Cultures

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The organoids were fixed and processed for immunostaining as is or after cryosectioning. Primary antibodies used for immunostaining were as follows: rabbit anti-SOX2 (Millipore), mouse anti-ISL1 (DSHB), rabbit anti-OLIG2 (IBL), mouse anti-NeuN (Chemicon), goat anti-NKX6.1 (R&D Systems), guinea pig anti-CHX1017 (link), rabbit anti-TUJ1 (BioLegend), mouse anti-TUJ1 (Millipore), rabbit cleaved-caspase3 (Cell Signaling Technology), goat anti-T (R&D Systems), rabbit anti-GFP (Abcam), goat anti-CHAT (Chemicon), and mouse anti-SMI-32 (BioLegend). After cell washes, samples were incubated with secondary antibodies and counterstained with Alexa Fluor® 488 phalloidin (Invitrogen) for axon labeling and Hoechst 33342 (Thermo Fisher Scientific) for nuclei staining.
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2

Multilineage Pancreatic Cell Profiling

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Differentiated cells at specific stages were fixed with 70% ethanol and blocked overnight with 6% BSA in PBST. Cells were stained with the primary antibodies goat anti-PDX1 (1:100; Abcam), goat anti-SOX9 (1:50; R&D Systems), mouse anti-NKX6.1 (1:100; DSHB), goat anti-NKX6.1 (1:50; R&D Systems), and mouse anti-Ki67-647 conjugate (1:50; BD Biosciences) for 3–4 h at room temperature. The cells were incubated with Alexa-fluor secondary antibodies (1:200; Molecular Probes, ThermoFisher Scientific) for 40 min at room temperature. The results were analyzed using the BD Accuri C6 flow analyzer and the results were processed using FlowJo.
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3

Immunohistochemical Analysis of Pancreatic Islets

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At the end of the culture period, islets were harvested, washed with PBS, and fixed in 4% paraformaldehyde (PFA) for 24 hours. PFA was removed and the islets were embedded in 1.5% agarose, subsequently embedded in paraffin, and sections made at 4 μm. After deparaffinization and rehydration, antigen retrieval was performed by microwaving slides in sodium citrate (0.01 M, pH 6.0). Sections were blocked with 5% donkey serum for one hour and incubated in primary antibody overnight at 4° C. Secondary antibodies were applied for 1 hour and nuclei were subsequently stained with DAPI (VECTASHIELD, Vector Laboratories). Slides were visualized with an Axio Imager (Carl Zeiss, Oberkochen, Germany). Overlay and cell counting were performed with ImageJ software (available at http://rsb.info.nih.gov/ij). Primary antibodies utilized in this study included: Guinea Pig anti-insulin, mouse anti-Ki67 (Dako), mouse anti-glucagon (Sigma), rabbit anti-Ki67, goat anti-PDX1 (Abcam), and goat anti-NKX6.1 (R&D). Secondary antibodies included: donkey Alexa Fluor-488 and -594 conjugates (Life Technologies and Jackson ImmunoResearch).
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4

Quantitative Protein Analysis of Pancreatic Islets

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Islets were stored at −80° C at the end of the culture period. For protein lysate extraction, islets were thawed and lysed in cell lysis buffer for 30 minutes. The protein lysate was centrifuged at 20000 g for 20 minutes to pellet residual cellular materials. A standard Bradford method (BioRad) was used to determine protein concentrations. Proteins were separated on a 4–20% SDS-polyacrylamide gel and transferred to a nitrocellulose membrane. Membranes were blocked with 5% milk for 30 minutes and primary antibodies then added for overnight incubation at 4° C. Membranes were washed and HRP-conjugated secondary antibodies (Jackson ImmunoResearch) were added for one hour. After wash, membranes were developed with ECL (Thermo Scientific). Primary antibodies utilized included: goat anti-NKX6.1 (R&D), rabbit anti-GAPDH, rabbit anti-PDX1, mouse anti-Insulin, and rabbit anti-NeuroD1 (Cell Signaling).
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