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14 protocols using amg510

1

Dose-Dependent Anti-Tumor Effects of AMG510

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Anti-tumor drug AMG510 was applied at the final concentration of 0.001 μM, 0.005 μM, 0.01 μM, 0.05 μM, 0.1 μM, 0.5 μM, 1 μM and 5 μM. The AMG510 (MedChemExpress, Shanghai, China) was dissolved according to the manufacturer’s instructions and 100× working solutions were prepared with DMSO. A 1‰ DMSO treatment was used as control.
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2

Drug Resistance Screening Protocol

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Puromycin was purchased from InvivoGen (catalog # ant-pr-1) and used at 1.5 μg/mL. Geneticin (G418) was purchased from ThermoFisher Scientific (catalog # 11811031) and used at 800 μg/mL. Doxycycline was purchased from MilliporeSigma (catalog # D9891) and used at 1 μg/mL unless otherwise stated. Compound B was synthesized by Daiichi-Sankyo and used at 500 nM to identify drug-resistant cells. Gefitinib was purchased from Selleck Chemicals (catalog # S1025) and used at 1 μM to identify drug-resistant cells. Osimertinib was purchased from Selleck Chemicals (catalog # S7297) and used at 100 nM to identify drug-resistant cells. Imatinib was purchased from Selleck Chemicals (catalog # S2475) and used at 1 μM to identify drug-resistant cells. AMG 510 was purchased from MedChemExpress (catalog # HY-114277) and used at 1 μM to identify drug-resistant cells. MRTX849 was purchased from SelleckChemicals (catalog # S8884).
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3

Authentication and Culture of Cell Lines for Research

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Cell lines were obtained from ATCC, Millipore Sigma or the Center for Molecular Therapeutics at the MGH Cancer Center (Boston, MA) (Crystal et al., 2014 (link)), which routinely performs cell line authentication testing by SNP and short tandem repeat analysis, and maintained in DMEM/F12 or RPMI 1640 supplemented with 10% fetal calf serum, and were not cultured longer than 6 months after receipt from cell banks. AMG 510 and MRTX849 used for in vitro and in vivo studies were purchased from MedChemExpress and ARS-1620, RMC-4550, BGJ398, and trametinib used for in vitro studies were purchased from Selleckchem. RM-018 used for in vitro studies and RMC-4550 used in in vivo studies were kindly provided by Revolution Medicines. Panitumumab was obtained from McKesson Pharmaceuticals.
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4

Assessing Kinase Inhibitor Efficacy

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EGF was from Invitrogen; selumetinib, afatinib, lapatinib, lapatinib, gefitinib, erlotinib, SHP099 and LY3009120 were from SelleckChem; SCH772984 was from MedChem Express; PMA, nocodazol and CP-724714 were from Sigma-Aldrich; RO-3306 was from Tocris Bioscience; AMG-510 was from MedChemExpress.
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5

Synergistic Drug Combination Screening

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Fifteen-hundred cells were seeded on a 96-well plate 24 h before drug treatment. The specific drugs used were AMG510 (MedChemExpress, USA, #HY-114277), GSK126 (Selleckchem, Houston, TX, USA, #S7061), and DS (DS18561882) (MedChemExpress, Monmouth Junction, NJ, USA, HY-130251). Cells were treated with indicated concentrations for indicated time periods. For synergistic effect assays, two inhibitors were combined in a series of nine increasing concentrations. Inhibitor concentrations ranged from 0 to 25 μM for AMG510, 0 to 20 μM for GSK126, and 0 to 100 μM for DS. In corresponding control groups, an equivalent amount of DMSO was added. After 72 h treatment, cell viability was analyzed using MTS, as described above. Drug synergy was evaluated using CompuSyn software (ComboSyn Inc, New York, NY, USA) for the combination index (CI) value calculations. CI values: antagonism (CI > 1.1), additive effect (CI < 1.1 and CI > 0.9), and synergism (CI < 0.9) [57 (link)].
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6

ALK Inhibitor Compounds Procurement

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Crizotinib (PF-02341066), brigatinib (AP26113), and lorlatinib (PF-06463922) were purchased from Shanghai Biochempartner (Shanghai, Chaina). Gilteritinib (ASP2215) was purchased from Shanghai Biochempartner and Biovision (Milpitas, CA, USA). Alectinib (CH5424802) and ceritinib (LDK378) were purchased from ActiveBiochem (Kowloon, Hong Kong). Entrectinib (RXDX-101) and AMG510 were purchased from Medchem Express (Monmouth Junction, NJ, USA). Afatinib (BIBW2992) was purchased from ChemieTek (Indianapolis, IN, USA). Trametinib (GSK1120212) was purchased from AdooQ BioScience (Irvine, CA, USA). Brigatinib was dissolved in ethanol for in vitro experiments, and the other drugs were dissolved in dimethyl sulfoxide (DMSO).
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7

Comprehensive Ferroptosis Modulation Protocol

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Blasticidin (AppliChem GmbH), RSL3 (Selleckchem), ML210 (Tocris), ML162 (Caymann), Erastin (Biomol), Sulfasalazine (SAS) (MedChemExpress), Imidazole Ketone Erastin (IKE) (Sellekchem), Ferrostatin-1 (Sigma Aldrich), Liproxstatin-1 (Biozol), Necrostatin-1s (Abcam), zVAD (ENZO), iFSP1 (Cayman Chemicals), Tert-butylhydroquinone (TBHQ) (Sellekchem), AMG510 (MedChemExpress), ARS1620 (Chemgood), PD184352 (Sigma Aldrich), MK2206 (Sellekchem), DRAQ7 (Biolegend), BODIPY C11 (Invitrogen), H2DCFDA (Invitrogen), Dharmafect I (Dharmacon), Puromycin (Sigma), Doxycycline hydrochloride (Alfa Aesar), 4-hydroxy-tamoxifen (4OHT) (Sigma), Polybrene (Merck), CaCl2 (Sigma Aldrich), HBS (Sigma Aldrich), propidium iodide (Sigma).
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8

AMG 510 Treatment in H358 Cells

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H358 cells were seeded at 20% confluency into 58-cm2 dishes with complete culture medium and, depending on the experiment, 0.1% (vol/vol) DMSO vehicle or 0.12 μM AMG 510 (MedChemExpress, HY-114277).
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9

Multimodal Analysis of Oncogenic Signaling

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Phospho-p44/42 MAPK (Erk1/2) (Thr202/Tyr204) (#9101), ERK, Phospho-STAT3 (Tyr705) (#9145), STAT3, Phospho-p90RSK, Phospho-S6 Ribosomal Protein (Ser235/236), p-MEK, Phospho-IRS-1 (Ser302), IRS1, GAPDH antibodies and the bead-conjugated rabbit anti-phosphotyrosine (P-Tyr-1000) were purchased from Cell signaling technology. AZD6244, PLX4032 were purchased from Selleck. AMG-510, MRTX-1257 were purchased from MedChemExpress (MCE). Atorvastatin (calcium salt) (Item No. 10493) was from Cayman chemical. Insulin, MβCD and FITC-CTXb were from Sigma.
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10

Authentication and Culture of Cell Lines for Research

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Cell lines were obtained from ATCC, Millipore Sigma or the Center for Molecular Therapeutics at the MGH Cancer Center (Boston, MA) (Crystal et al., 2014 (link)), which routinely performs cell line authentication testing by SNP and short tandem repeat analysis, and maintained in DMEM/F12 or RPMI 1640 supplemented with 10% fetal calf serum, and were not cultured longer than 6 months after receipt from cell banks. AMG 510 and MRTX849 used for in vitro and in vivo studies were purchased from MedChemExpress and ARS-1620, RMC-4550, BGJ398, and trametinib used for in vitro studies were purchased from Selleckchem. RM-018 used for in vitro studies and RMC-4550 used in in vivo studies were kindly provided by Revolution Medicines. Panitumumab was obtained from McKesson Pharmaceuticals.
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