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Microtof q 3 device

Manufactured by Bruker
Sourced in Germany

The MicrOTOF-Q III is a high-resolution quadrupole time-of-flight (Q-TOF) mass spectrometer designed for accurate mass determination and structural elucidation. It features a high-performance quadrupole mass filter, an orthogonal acceleration reflector time-of-flight analyzer, and a sensitive detector system.

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2 protocols using microtof q 3 device

1

Comprehensive Peptide Characterization

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Peptide characterization was achieved by means of analytical RP-HPLC (see above for the linear precursor), mass spectrometry, and amino acid analysis.
The peptide concentration as well as the amino acid composition were analyzed using an LC 3000 system from Eppendorf-Biotronik (Hamburg, Germany). Peptide hydrolysis was carried out in 6 N HCl at 110 °C in sealed tubes for 24 h. Subsequently, the hydrolyzed peptides were dried in a vacuum concentrator and redissolved. The respective amino acid concentrations were determined by comparison with an amino acid standard solution (Laborservice Onken, Gründau, Germany).
Peptide masses were determined using matrix-assisted laser desorption/ionization (MALDI) mass spectrometry. As matrix 2,5-dihydroxyacetophenone (2,5-DHAP) was used according to the manufacture’s guideline (Bruker Daltonics, Bremen, Germany). MALDI mass spectra were produced on an UltrafleXtreme instrument (Bruker Daltonics, Bremen, Germany).
The disulfide connectivity of the N-terminal fragment was determined as described recently [29 (link),30 (link)]. Therefore, a micrOTOF-Q III device (Bruker Daltonics, Bremen, Germany) was used to measure electrospray ionization (ESI) mass and tandem-mass spectra.
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2

Detailed Peptide Characterization Protocol

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Peptides were characterized by analytical HPLC (see above), mass spectrometry, amino acid analysis, and thin layer chromatography (TLC). The amino acid composition of the peptides was verified by amino acid analysis using a LC 3000 system from Eppendorf-Biotronik (Hamburg, Germany). Full peptide hydrolysis was in 6N HCl at 110 °C in sealed tubes for 24 h. Afterwards the samples were dried in a vacuum concentrator, redissolved, and the concentrations were determined by comparison with an amino acid standard. The results were in the expected range for peptide contents between 50 and 80 %.
For characterization of peptide molar masses matrix-assisted laser desorption/ionization (MALDI) and electrospray ionization (ESI) mass spectrometry were used. MALDI mass spectra were measured on an ultrafleXtreme, an autoflex III smartbeam, and an autoflex II instrument (Bruker Daltonics, Bremen, Germany), ESI mass spectra were produced on a micrOTOF-Q III device (Bruker Daltonics, Bremen, Germany) as earlier described.14 (link)
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