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2 protocols using anti sip1

1

Immunofluorescence Characterization of HPMCs

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HPMCs were grown on coverslips, washed twice with PBS, fixed in 4% paraformaldehyde for 20 min, and permeabilized using 0.1% Triton X-100. The antibodies used were as follows: anti-E-cadherin (1:100 dilution), anti-vimentin (1:100) from Santa Cruz Biotechnology; anti-SIP1 (1:100), and anti-SOX4 (1:100) from Abcam. The antibodies were diluted in a blocking buffer and cells were incubated with them overnight at 4 °C, followed by incubation with FITC-labeled secondary antibody (Santa Cruz Biotechnology) for 2 h at 22 °C. They were then examined using a UV fluorescence microscope. The intensity of fluorescence was analyzed by image analysis software (Path, QC, Logene Biological Medical Engineering) as described in (ref. 31).
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2

Western Blot Analysis of Cell Signaling Proteins

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Protein preparations from the indicated cells were obtained by lysing samples in 50 mmol/L of TRIS (pH 7.5), 100 mmol/L of NaCl, 1% NP40, 0.1% Triton, 2 mmol/L of EDTA, 10 Ag/mL of aprotinin, and 100 Ag/mL of phenylmethylsulfonyl-fluoride. Prestained molecular weight standards were from Bio-Rad (Milan). Proteins separated on the polyacrylamide gels were blotted on a PVDF membrane. The membrane was stained with Ponceau S (Sigma) to enable us to evaluate the success of transfer, and to locate the molecular weight markers. Free protein binding sites on the PVDF membrane were blocked with nonfat dry milk and a Tween 20/TBS solution. The membranes were washed and stained with specific primary antibodies and with secondary antisera, and then conjugated with horseradish peroxidase (Sigma-Aldrich) diluted 1:2,000. The anti-E-cadherin, anti-N-cadherin, anti-CXCR2, anti-phospho-P38, anti-P38, anti-IκB, anti-NF-κB, anti-slug, anti-twist1, anti-ZEB1, anti-Snail and anti-SIP1 antibodies were purchased from Abcam, and the anti-GRO-α antibody was from Santa Cruz. The luminescent signal was visualized with the ECL Western blotting detection reagent kit (Amersham) and quantified by scanning with a Discover Pharmacia scanner equipped with a Sun Spark Classic Workstation.
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