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29 protocols using model 3550 microplate reader

1

Cell Viability Assay for Cancer Cell Lines

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Human hepatocellular carcinomas HepG-2 cells, human pulmonary epithelial A549 cells and human cervical carcinoma Hela cells, were cultured in Dulbecco’s modified Eagle’s medium (DMEM) with 10% fetal bovine serum. All the cultures were maintained in an incubator at 37 °C with 5% CO2 in a humidified atmosphere. Cell viability was measured by Cell Counting Kit (CCK)-8 (Dojindo, Tokyo, Japan) assay. A549, Hela and HepG-2 cells (5.0 × 103 cells per well) were seeded into 96-well plates (Corning, NY, USA) and cultured for 24 h. Cells were then incubated with fresh media containing the compound sunder study at various concentrations for 24, 48, or 72 h. After incubation, the media were removed and the wells were washed twice with PBS to remove non-adherent cells. Then, 100 μL fresh medium and 10 μL CCK-8 were added to each well at the indicated time points. The cells were further incubated at 37 °C for 60 min. The absorbance of the samples was measured at 450 nm using a Bio-Rad model 3550 micro platereader (Richmond, CA, USA).
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2

Mangiferin's Effect on Islet Cell Proliferation

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Islet cells at the logarithmic growth phase were seeded in a 24-well plate (2×105 cells per well) and incubated at 37°C for 24 h. Mangiferin was then added and the cells were incubated for another 24 h. Subsequently, 10 µl of a 5 mg/ml solution of MTT was added to each well, followed by incubation at 37°C for 4 h. Subsequently, the medium was removed and the plates were thoroughly agitated for 1 h. Finally, termination buffer was added to each well, and the absorbance at 570 nm was measured with a spectrophotometer (Model 3550 Microplate Reader; Bio-Rad Laboratories, Inc., Hercules, CA, USA). The proliferation rates were calculated from the optical density (OD) according to the following formula: Cell proliferation (%) = [OD 570 nm (drug)/OD 570 nm (control)] × 100%.
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Cytotoxicity Evaluation of Rapamycin

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For cytotoxicity experiments, cell lines were seeded in a 96-well plate and treated with rapamycin (Med Chem Express, USA) for 72 h. rapamycin was dissolved in dimethylsulfoxide to a final concentration of 10 mM. The working concentrations were diluted to 0, 10, 15, 20, 25, and 30 μM, and four wells were used for each concentration. Cell proliferation was assessed using the Cell Counting Kit-8 (CCK-8; Meilunbio Biotechnology Co., Ltd). The absorbance was measured at 450 nm using a model 3550 microplate reader (BioRad Laboratories, Inc., Hercules, CA, USA). Half maximal inhibitory concentration (IC50) values were calculated, and the inhibition curve was plotted using GraphPad Prism software, Version 8.0.
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4

Mangiferin Cytotoxicity in OVCAR3 Cells

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OVCAR3 cells at logarithmic growth phase were seeded in a 96-well plate and incubated at 37°C for 24 h, and different dosage of mangiferin (12.5, 25, 50 and 100 µg/ml) were added and incubated for 12, 24, 36 and 48 h, respectively. MTT [0.05 mg (10 µl of 5 mg/ml)] was added to each well and incubated at 37°C for 4 h, and then medium was removed and shaked thoroughly for 1 h. Finally, termination buffer was added into each well. The absorbance at 570 nm was measured with a spectrophoto-meter (Model 3550 Microplate Reader, Bio-Rad Laboratories, Hercules, CA, USA). Cell viability (%) = [OD 570 nm (drug)/OD 570 nm (control)] ×100%.
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Evaluating PJT's Effect on MCF-7 Viability

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The effect of PJT on MCF-7 cell viability was determined using an established MTT assay. Briefly, 3×104 cells were seeded in wells and incubated at 37°C for 24 h to allow attachment. The attached cells were left untreated or treated with 1, 10, 25, 50 and 100 µg/ml PJT for 24 h at 37°C. The cells were then washed with PBS prior to the addition of MTT (0.5 mg/ml in PBS) and incubated at 37°C for 30 min. Formazan crystals were dissolved with dimethylsulf-oxide (100 µl/well) and detected at 570 nm using a Model 3550 microplate reader (Bio-Rad, Richmond, CA, USA).
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6

Mangiferin Cytotoxicity in A549 Cells

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A549 cells at logarithmic growth phase were seeded in a 96-well plate (3×104 cells per well) and incubated at 37°C for 24 h. Various concentrations of mangiferin (12.5, 25, 50 and 100 µg/ml) were added to the cells, which were incubated for a further 12, 24, 36 and 48 h. The control group was treated with phosphate-buffered saline (PBS; Sigma-Aldrich). Subsequently, 0.05 mg MTT (10 µl of 5 mg/ml) was added to each well and incubated at 37°C for 4 h, after which the medium was removed and the plate was thoroughly agitated for 1 h. Finally, termination buffer (SDS-HCl) was added to each well and incubated for 4 h at room temperature. The absorbance was measured at a wavelength of 570 nm using a spectrophotometer (Model 3550 Microplate Reader; Bio-Rad Laboratories, Inc., Hercules, CA, USA). Cell viability was determined using the following equation: Cell viability (%) = [OD 570 nm (drug)/OD 570 nm (control)] × 100%. OD indicates optical density.
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7

Cell Viability Evaluation of Herbal Extract

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Cell viability was evaluated by CCK-8 assay. Briefly, BMCs were plated in 96-well culture plates (1×105 cells/well) with RPMI-1640 supplemented with 10% FBS. Subsequently, cells were divided into different groups treated with various concentrations of the herbal aqueous extract (0, 10, 50, 100, 250, 500, 750 and 1000 μg/mL) at 37°C in a humidified 5% CO2 incubator. After 24 h of incubation, CCK-8 solution (20 μL) was added into each well and then incubated for another 4 h at 37°C. The optical density of the purple solution was measured at 570 nm by a microplate reader (Model 3550 Microplate Reader, Bio-Rad Laboratories, Inc., Hercules, CA, USA). The results of the CCK-8 assay indicated that the two concentrations (100 μg/mL and 250 μg/mL) of freeze-dried powder were suitable for cell stimulation. In particular, the two concentrations were optimal for reflecting the dependence and correlation between drug intervention time and drug dose (S1 Fig).
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8

SDF-1α Quantification and Binding Assay

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SDF-1α was measured in CM from MCF-7 and MDA-MB-231 cells using a commercially available ELISA Kit in accordance with the instructions by the manufacturer (Human CXCL12/SDF-1 alpha Quantikine ELISA Kit, R&D Systems, Inc. Minneapolis, USA).
For binding assay, breast cancer cells were untreated (-) or treated with BRL 10 μM in phenol red-free media containing 5% CT-FBS for 24 h. Then, cells were harvested with versene reagent, washed twice in PBS and 103 cells/well were incubated with CAF-CM in a final volume of 100 μl binding buffer (50 mM HEPES, pH 7.4, 1 mM CaCl2, 150 mM NaCl, 5 mM MgCl2, 5% bovine serum albumin). Samples were incubated for 60 min at 4°C with rotation. After incubation, cells were centrifuged and washed twice with 300 μl wash buffer (50 mM HEPES, pH 7.4, 1 mM CaCl2, 500 mM NaCl, 5 mM MgCl2) and freezed to −20°C and thawed to room temperature 3 times and then centrifuged at 1500×g for 10 minutes at 2 − 8°C to remove cellular debris. The supernatants were collected for assaying human SDF-1α levels (R&D Systems). The optical density of each well was determined using a microplate reader at 450 nm (Bio-Rad Model 3550 microplate reader, Richmond, CA) and normalized for cell number. At least three independent experiments were performed.
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9

Screening Antidiabetic Drugs and Herbal Ingredients

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A total of 1 × 104 cells were plated in 96-well flat-bottom plates in 100 μL of medium. The next day, cells were exposed to the antidiabetic drugs and potential herbal ingredients at different concentrations. After one day from the last drug addition, 20 μL of 5 mg/mL MTT solution in PBS was added to each well for 4 h. The medium was removed, and 200 μL DMSO was added to each well to dissolve the formazan crystals. Absorption at 570 nm was determined using a Bio Rad microplate reader (Model 3550 microplate reader, Bio-Rad Laboratories, Richmond, CA). Triplicate wells were assayed for each condition, and standard deviations were determined. The concentrations of each agent with survival rates >90% were selected for use in the following assays.
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10

Analyzing Cell Growth Dynamics

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Neurospheres were dissociated into single cells by Accutase and resuspended in PBS. The cells were seeded at a density of 1 × 105 cells/mL in nine culture plates. The growth rates of the cells were then determined by CCK-8 assay. Next, cells were incubated in 10 μL CCK-8 working solution at 0, 24, 48, and 72 h, followed by incubation for 2 h at 37°C. The absorbance was finally measured at 450 nm using a model 3550 microplate reader (Bio-Rad Laboratories, Inc., Hercules, CA, USA).
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