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N formyl methionyl leucyl phenylalanine

Manufactured by Merck Group
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N-formyl-methionyl-leucyl-phenylalanine (fMLP) is a synthetic peptide that mimics the structure of bacterial-derived peptides. It functions as a chemoattractant, stimulating the migration and activation of certain immune cells, such as neutrophils. fMLP is commonly used in research applications to study cellular signaling and immune response mechanisms.

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39 protocols using n formyl methionyl leucyl phenylalanine

1

NBT Reduction Assay for HL-60 Cells

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HL-60 cells or differentiated HL-60 cells in 50 μL of serum-free RPMI-1640 medium with a cell number of 2 × 105 were added to 150 μL of D-PBS, pH 7.2, containing 0.13% (w/v) NBT (Cat. # N6495, Invitrogen, Carlsbad, CA, USA) and various stimuli, including PMA (Cat. # P1585, Sigma-Aldrich), N-formyl-methionyl-leucyl-phenylalanine (fMLP, Cat. # F3506, Sigma-Aldrich) and HP-NAP. The final concentration of PMA, fMLP, and HP-NAP were 0.32 μM, 1 μM, and 1 μM, respectively, unless otherwise specified. NBT was dissolved in water at a concentration of 2% (w/v) as the stock solution and its final concentration in the assay was 0.1% (w/v). The cell suspension, at a final volume of 200 μL, was incubated at 37 °C for 30 min and then placed on ice for 5 min to stop the reaction. Approximately 2 × 104 of the cells were centrifuged at 600× g for 6 min onto a slide using a Shandon Cytospin 2 (Thermo Electron Corporation, Waltham, MA, USA). The slide was stained with Liu’s stain and the percentage of cells containing intracellular blue-black formazan was determined by counting at least 200 cells per slide under a light microscopy.
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2

Quantifying Neutrophil CD11b Expression

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Ten µL HDL of a tenfold concentrated stock solution was added to 90 µL PMNL suspension (0.3 × 106 cells/mL) and incubated for 30 min at 37 °C. Then, 10 µL PBS or N-formyl-methionyl-leucyl-phenylalanine (fMLP; Sigma-Aldrich Chemie GmbH, Steinheim, Germany) stock solution (10−7 M) was added and incubated for another 30 min at 37 °C. After addition of a fluorescence labelled monoclonal antibody (PC5-anti-CD11b; Immunotech Beckman Coulter, Marseille, France) the samples were incubated for 45 min at room temperature and put on ice. 500 µL ice cold PBS was added. Flow cytometry was performed on an Epics XL-MCL (Coulter, Hialeah, FL, USA). The CD11b surface expression was measured as mean fluorescence intensity (MFI).
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3

Neutrophil Chemotaxis Assay with fMLP

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Neutrophil were isolated from bone marrow and were incubated with cytochalasin-B (5 μg/ml, 30 min; Sigma-Aldrich), then N-formylmethionyl-leucyl-phenylalanine (fMLP; 10 μM, 1 hour; Sigma-Aldrich) [29 (link)]. For chemotaxis assay, freshly isolated neutrophils (1.5 × 106) were placed in the upper chamber of the Transwell inserts (3 μm pore size; Corning Costar, Corning, NY, USA). Inserts were placed in wells containing medium alone (control) or Y/O-hepatic stellate cell-conditioned medium with or without CXCR2 antagonist SB225002 (100 nM). After 120 min, inserts were removed, and migrated neutrophils were collected and counted.
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4

Neutrophil Activation Assay Protocol

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Alloxan, Glucagon, Des-his1-[Glu9]-Glucagon amide, Rolipram, Percoll, RPMI medium, Hank’s balanced salt solution without Ca+2 or Mg+2 (HBSS), mouse CXCL1/KC, human CXCL8/IL-8, N-formyl methionyl-leucyl-phenylalanine (fMLP), H-89, SQ 22536, DMSO, LPS, Penicillin, Zymosan A and Streptomycin were purchased from Sigma Chemical Co (St. Louis, MO, USA). Ficoll-Paque PLUS (density 1.077 g/mL) was purchased from GE Healthcare Bio-Sciences (Pittsburgh, PA, USA), platelet-activating factor (PAF) was purchased from Calbiochem (San Diego, CA, USA), and fetal bovine serum (FBS) was purchased from Gibco (Albuquerque, NM, USA). Meropenem was purchased from ABL – Antibióticos do Brasil (São Paulo, SP, Brazil) and Luminol was donated by Prof. Margareth Queiroz from Oswaldo Cruz Institute/Fiocruz (Rio de Janeiro, RJ, Brazil). All the solutions were freshly prepared immediately before use.
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5

Antioxidant Enzyme Expression Analysis

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GPX1, GPX4 and 12-LOX antibodies were purchased from Abcam and R&D Systems. The pan GPX inhibitor (Sodium iodoactate), the mouse anti-β-actin antibody, N-formylmethionyl-leucyl-phenylalanine (fMLP) and cytochalasin D were purchased from Sigma (St Loius, MO). 12S-HETE ELISA kit was purchased from Enzo Life Sciences while the Glutathione Peroxidase Assay kit was purchased from Cayman Chemical Company (Ann Arbor, MI). GPX1, GPX4 and 12-LOX probes for RT-PCR were purchased from Qiagen while the GPX4 over expressing plasmid (Cat. No. SC324086, Gene Accession No. NM_002085.1) and pCMV6-A carrier vector (Cat. No. PS10020) were purchased from OriGene. Unless otherwise indicated all secondary antibodies used for Western blotting were purchased from Santa Cruz.
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6

Neutrophil Activation and Surface Marker Analysis

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Neutrophils (5 x 106/ml in phosphate buffered saline with cations (PBS+, Sigma-Aldrich)) were stimulated with N-formylmethionyl-leucyl-phenylalanine (fMLP, 100 nM; Sigma-Aldrich), interleukin-8 (IL-8), TNF-α (100 ng/ml and 10 ng/ml respectively; R&D Systems) or buffer for 10 or 30 min. Cells were incubated with 100 μl phosphate buffered saline without cations (PBS-, Sigma-Aldrich) containing 5 μl mouse anti-human CD13 fluorescein isothiocyanate (FITC)-conjugated antibody (Clone WM-47; Millipore UK Ltd, FCMAB180F) or an isotype control for 30 min and analysed by flow cytometry (FACSCalibur, BD Biosciences). Mean fluorescence values were calculated from 10,000 events per sample using FLOWJO 7.2.5 software (Tree Star, Inc. Ashland, USA).
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7

Neutrophil Chemotaxis Assay with Galectin-9

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Chemotaxis was evaluated by the Cell Invasion Assay (Millipore Sigma, Cat. ECM 555). Blood neutrophils (n=10) and oral neutrophils (n=6) from HCs (n=10) were isolated and 0.5 million cells were used per well. Cells were pre-incubated in a 96 well plate with the anti-CD44 antibody (TermoFisher, Cat. 16-0441-85) at 37°C, for 30 min. Then cells were transported to the upper chamber of the migration assay and incubated in the presence or absence of soluble Galectin-9 (1.5 ng/ml) for 3 hours at 37°C. N-Formylmethionyl-leucyl-phenylalanine fMLP (50 μm, Sigma Aldrich, Cat. F3506-10MG) was used as a chemoattractant in the lower chamber. Culture media was used as the negative control. The migrated cells were lyzed and quantified by measuring the relative fluorescence units per manufacturing protocol using the plate reader a5 480/520 nm.
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8

Purification and Neutralization of Interleukin-1

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Glutathione S-transferase (GST)-pro-IL1α and GST-pro-IL1β fusion proteins purified from a wheat germ expression system were purchased from Abnova (Taipei, Taiwan), recombinant human IL-1α and IL-1β from Peprotech (Rocky Hill, New Jersey), thapsigargin from Abcam (Cambridge, MA), and N-formyl-methionyl-leucyl-phenylalanine (fMLP) from Sigma-Aldrich (St. Louis, MO). Anti-IL-1α-neutralizing antibody (MABp1) and IgG isotype control were obtained from Dr. John Simard at XBiotech (Austin, TX) and anti-IL-1β-neutralizing antibody (canakinumab) from Dr. Hermann Gram at Novartis (Basel, Switzerland). Anti-TF-neutralizing antibody (TF8-5G9) was provided by Drs. James Morrisey and Kevin Croce. CatG from human neutrophils was purchased from Sigma-Aldrich, CatG inhibitor I from Cayman Chemical Co. (Ann Arbor, MI), CatG substrate from Bachem (Torrance, CA), and NE substrate from EMD Millipore (Billerica, MA).
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9

CBG Characterization and Endotoxin Assay

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CBG, with purity greater than 99%, was purchased from the Chinese National Institute for Food and Drug Control. It was dissolved in dimethyl sulfoxide (DMSO) from Sigma and stored in stock concentration of 20 mg/ml at -20°C. The Pierce Limulus Amebocyte Lysate (LAL) Chromogenic Endotoxin Quantitation Kit was purchased from Thermo Scientific. As a reference for mass spectrometry analysis showed in S1 Fig, CBG (C1272) was bought from Sigma-Aldrich, Sweden, dissolved to 1 mg/ml in MeOH. LPS from Escherichia coli O111:B4, adenosine 5′-triphosphate (ATP), staurosporine solution, cytochalasin B (CytB) and N-formyl-methionyl-leucyl-phenylalanine (fMLP) were purchased from Sigma. The caspase-1 inhibitor Z-YVAD-FMK was from MBL. The lactate dehydrogenase (LDH) Cytotoxicity Detection Kit PLUS was from Roche Applied Science.
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10

3D Cell Migration Assay with PMNs

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To induce and observe cell migration, 3D-µ-Slide migration-chambers (Ibidi GmbH, Graefelfing, Germany) were used. One slide contains three separated systems or chambers, each chamber consists of a central channel and a left and a right reservoir (Figure 3).
The three chambers were filled as described in Table 1 and Figure 3b. In this setup, the PMNs—placed in the right reservoir—migrated along the gradient of the chemoattractant n-formylmethionyl-leucyl-phenylalanine (fMLP; Sigma Aldrich, St. Louis, USA), which was brought into the left reservoir. During migration, cells had to pass through the collagen matrix inside the central channel and could thereby be examined via live cell imaging (Figure 3c). Based on preliminary tests (data not shown), where we had already proven that only granulocytes were able to pass the collagen matrix, we were assured that solely this cell type (CD11b+; CD62L+; CD66+) is observed.
Cell observation was performed with a Leica DMi8 microscope and recorded with Leica DFC9000 GT camera (both Leica Microsystems GmbH, Wetzlar, Germany) for 22 h. Both camera and microscope were controlled by Leica Application Suite X software platform, version 3.4.2.18368 (Leica Microsystems GmbH). A stage top incubator consisting of Ibidi Blue Line gas mixer and Ibidi heating chamber (both Ibidi GmbH) was used to keep conditions constant at 37 °C and 5% CO2.
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