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Optical bottom black 96 well plates

Manufactured by Thermo Fisher Scientific
Sourced in United States

Optical-bottom black 96-well plates are a type of laboratory equipment used for various applications in scientific research. These plates are designed with a black bottom to minimize background fluorescence, making them suitable for assays that require optical measurements, such as fluorescence or luminescence detection. The plates typically have 96 individual wells, allowing for multiple samples or replicates to be analyzed simultaneously.

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6 protocols using optical bottom black 96 well plates

1

Cleaning Optical-Bottom 96-Well Plates

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Optical-bottom black 96-well plates (#265301, Thermo Fisher Scientific, Waltham, MA, USA) were rinsed with an acetone-ethanol 1/9 (v/v) mixture. Each well was filled with 320 μL of acetone–ethanol mixture and aspirated completely. The rinsed 96-well plate was dried in a safety cabinet for at least 15 min before use.
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2

Fluorescent Toxoplasma gondii Proliferation Assay

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Fluorescent T. gondii proliferation assays were performed as previously described [36 (link)]. Briefly, 2000 parasites suspended in complete RPMI were added to the wells of optical bottom black 96 well plates (ThermoFisher) containing a confluent layer of HFF cells, either in the presence of 100 μM IAA dissolved in ethanol (final ethanol concentration of 0.1%, v/v) or with ethanol (0.1%, v/v) as a vehicle control, in triplicate. Fluorescent measurements (Excitation filter, 540 nm; Emission filter, 590 nm) using a FLUOstar OPTIMA Microplate Reader (BMG LABTECH) were taken over 7 days.
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3

Live Imaging of Cyst Formation

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Live imaging was performed using cysts grown in optical bottom black 96-well plates (Thermo Scientific, 165305) on a layer of Matrigel, 5 µl per well (as for growth in 8-well chamber slides), with 2×104 cells per well. Wells were filled to maximum volume with media supplemented with 2% Matrigel and imaged using an Opera Phenix (Perkin Elmer) with temperature and environmental controls (37°C and 5% CO2), using a ×20 NA 0.95 water immersion lens (Zeiss). Frames were captured at 7.5 min intervals for between 6 and 12 h. Movies were exported from the Columbus software and spindle orientation angles were analysed manually in ImageJ.
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4

Cytotoxicity Evaluation of B[a]P and Pollutants

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Used materials included DMEM/F12 (Sigma, D6421),
FBS (Merck S0115), trypsin-EDTA (Sigma, T6689),
L-glutamine (Biochrom, K0283), gentamycin (Merck
A2712), PBS (Merck, L1825), DMSO (Sigma, D2650),
MTT (Sigma M5655), and 96-well optical-bottom black
plates (Thermo Scientific, 165305). B[a]P (CAS No.
50-328, MW 252.31 g/mol, ≥96% purity (HPLC)) was obtained
from Sigma-Aldrich (B1760). B[a]P and the antipollutant
blend were dissolved in DMSO and stock solutions were
stored at –20 °C.
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5

Cell Viability Assay with CellTiter-Glo

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Reconstituted CellTiter-Glo (Promega, Madison, Wisconsin, USA) reagent was added to 96-well optical bottom black plates (Thermo Fisher Scientific Inc., Waltham, Massachusetts, USA) containing 3×103 cells in 100 μl of Opti-Mem (GIBCO) supplemented with 10% fetal bovine serum (Sigma-Aldrich) according to Promega’s instructions. Assay plates were sealed and shaken on a plate shaker for 2 min at 400 rpm and incubated for 10 min. Luminescence was then recorded on either a SpectraMaxL (Molecular Devices, Sunnyvale, California, USA) or a SynergyMX (Biotek, Winooski, Vermont, USA) luminometer. Cell growth was determined by comparing assay signals of treated cells with the control conditions of untreated cells (defining 0% growth inhibition and 100% of normalized value). Three replicates were performed for each condition and the mean of the signal was used to determine proliferation at each time point.
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6

In vitro Antileishmanial Activity Assessment

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All compounds were assayed in vitro against L. infantum BCN150 iRFP promastigotes (iRFP-L. infantum), a genetically modified strain that constitutively produces the infrared fluorescent protein (iRFP) for near infrared detection (Calvo-Álvarez et al., 2015b ). Promastigotes were cultured in M199 medium (Gibco), supplemented with 25 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) pH 6.9, 7.6 mM hemin, 10 mM glutamine, 0.1 mM adenosine, 0.01 mM folic acid, 1xRPMI 1640 vitamin mix (Sigma), 10% (v/v) heat inactivated foetal bovine serum (FBS) (Gibco), 50 U/mL penicillin and 50 μg/mL streptomycin. Cultures of iRFP-L. infantum promastigotes with a density of 1 × 106 cells/mL, were dispensed into 96-well optical bottom black plates (Thermo Scientific), 180 μL per well. Each compound was tested adding 20 μL of different stock solutions to the inoculated wells. Stock solutions were prepared in dimethylsulfoxide (DMSO) and serially diluted in M199 media (0.01–200 μM final concentrations). The viability of promastigotes to calculate the 50% effective concentration (EC50) values was assessed measuring their fluorescence at 713 nm in an Odyssey (Li-Cor) infrared imaging system after 72 h exposure at 26 °C. All compounds and controls were assayed by triplicate. Plots were fitted by nonlinear analysis using the Sigma Plot 10.1 statistical package.
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