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21 protocols using cd14 clone m5e2

1

Multicolor Flow Cytometry Analysis

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Samples were analyzed using a FACSCanto flow cytometer (BD Biosciences) with FACSDiva software (BD Biosciences). At least 10,000 events were collected per sample and data were analyzed using FlowJo software (TreeStar). Antibodies used for flow cytometry were: MPO (clone 5B8, BD Biosciences), CD14 (clone M5E2, BD Biosciences), CD11b (clone D12, BD Biosciences), CD80 (clone 2D10, Biolegend), CD206 (clone 15-2, Biolegend), and TopFluor-E06 (Avanti Polar Lipids). For E06 staining, DAPI was used to exclude dead cells.
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2

Flow Cytometric Analysis of Myeloid Dendritic Cells and Monocytes

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Flow-cytometric analysis was performed to characterize myeloid dendritic cell (mDC) and monocyte (Mo) frequencies in PBMCs. All antibodies were purchased from BD Biosciences (San Jose, CA). Cells were stained according to BD protocols using the following mouse anti-human antibodies: CD3 (clone SP34-2), CD14 (clone M5E2), CD16 (clone 3G8), CD20 (clone 2H7), CD33 (clone P67.6), HLA-DR (clone G46.6), and CD11c (clone S-HCL-3). MDC frequencies were reported as percentage of mononuclear cells (MNC). Monocytes were further defined by gating as traditional monocytes (CD14++CD16), inflammatory monocytes (CD14++CD16+) and patrolling monocytes (CD14dim CD16++) (see Additional file 1: Figure S1). Samples were acquired on the LSR11 (BD; San Jose, CA) using FACS DIVA software and analysed with FlowJo (TreeStar, Inc., Ashland, OR).
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3

Quantitative Flow Cytometry for Immune Activation

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Cells were stained with live/dead stain (Invitrogen, Carlsbad, CA) before fixation in Fix I Buffer (BD Biosciences, San Jose, CA) and immunostaining for cell surface CD14 (clone M5‐E2) and CD11c (clone B‐ly6) (BD Biosciences). For intracellular markers, cells were permeabilized with Perm/Wash buffer (BD Biosciences) before staining with antibodies to phospho‐NF‐κB p65 (clone 20/NF‐κB/p65) and phospho‐p38 MAPK (clone 36/p38) (BD Biosciences) as per the manufacturer's instructions, and analysed on an LSR‐II flow cytometer (BD Biosciences). The mean fluorescence intensity of staining of each phospho‐protein was used to calculate an activation index represented by the ratio of stimulated to unstimulated samples.
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4

Modulation of Monocyte Phenotype by IL-10

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Peripheral blood mononuclear cells (PBMCs) were isolated from buffy coats obtained from healthy donors (Oklahoma Blood Institute). Monocytes were enriched from PBMCs using magnetic bead separation (Miltenyi Biotech). Purity was >90% by flow cytometry and viability was >99% by trypan blue exclusion post enrichment. Monocytes were stimulated with 10 ng/ml recombinant hIL-10 (Peprotech) or recombinant vIL-10 (R&D systems) for indicated times. STAT3 phosphorylation was detected by flow cytometry using antibodies directed against phospho-STAT3 Y705 (BD Biosciences). To inhibit signaling through IL-10R, monocytes were stimulated with hIL-10 or vIL-10 in the presence or absence of a neutralizing antibody to IL-10R1 (Clone: 37607, R&D systems), and STAT phosphorylation was measured as above. To differentiate monocytes into macrophages, cells were cultured with 50 ng/ml M-CSF (R&D systems). On day 6 cells were additionally stimulated with IFNγ (20 ng/ml, Peprotech), IL4 (20 ng/ml, Peprotech), hIL-10 (10 ng/ml), or vIL-10 (10 ng/ml) for 24 h. Surface markers were stained using following antibodies: CD14 Clone M5E2, CD163 Clone GHI/61, CD32 Clone FLI8.26 (BD Biosciences), CD16 Clone 3G8, CD64 Clone 10.1, HLA-DR Clone LN3, CD86 Clone IT2.2 (BioLegend). Cells were acquired on BD LSR II or BD Celesta (BD Biosciences) and data were analyzed using FlowJo (TreeStar, v10).
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5

Phenotypic Characterization of PBMCs

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Freshly isolated PBMCs were washed once in FACS buffer (PBS supplemented with 3% fetal bovine serum and 0.1% sodium azide) and stained for flow cytometry. Antibodies used; CD14 clone M5E2, HLA-DR clone G46-6, CD86 clone IT2.2, CD163 clone GHI/61, CD3 clone HIT3a, CD4 clone RPA-T4, CD8 HIT8a, CD25 clone 2A3, CD127-biotin clone HIL-7R-M21, CD56 clone B159, all from BD Biosciences. All analyzes were performed on a FACS Calibur and gated on viable PBMCs using 7AAD dead exclusion stain (BD Biosciences, San Jose, CA, USA).
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Flow Cytometry for Cell Surface Analysis

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Flow cytometry used to assess cell surface expression of host proteins was performed using a BD LSRFortessa (San Jose, CA, USA) instrument with FACS Diva software (San Jose, CA, USA), and all data were analyzed using FlowJo software version 10.7.1. (San Jose, CA, USA). HEK293 cells were stained with primary mouse anti-human monoclonal antibodies against α4β7 (clone ACT-1 [60 (link)]; NIH ARP), CD14 (clone M5E2; BD Bioscience, Sparks, MD, USA), CD162 (clone KPL-1; BD Bioscience), and CD81 (clone JS-81; BD Bioscience) for 30 min. After primary antibodies were removed by washing, staining with an R-phycoerythrin (PE) conjugated F(ab’)2-goat antimouse IgG secondary antibody which recognizes IgG heavy and light chains (Invitrogen, Carlsbad, CA, USA; Cat#A10543) was performed for 20 min. All antibodies were used at a concentration of 2 μg/mL for cellular staining.
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Differentiation of THP-1 Cells

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Prior to treatments, THP-1 cell lines were diluted to 0.2x106 cells/ml and differentiated with 100nM 1α,25-dihydroxy Vitamin D3 (Cayman Chemical) for 72 hours. Differentiation was confirmed by measuring expression of CD11b and CD14 markers by flow cytometry (antibodies: CD11b, clone D12; CD14, clone M5E2, BD Pharmingen).
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8

Isolation and Expansion of SIV-Reactive Memory B Cells

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Cryopreserved PBMCs were thawed, washed, and stained with an antibody cocktail (1:100 dilution) of CD3 (clone SP34-2, BD Biosciences), CD4 (clone OKT4, Biolegend), CD8 (clone RPA-T8, BD Biosciences), CD14 (clone M5E2, BD Biosciences), CD20 (clone 2H7, Biolegend), IgM (MHM-88, Biolegend), IgG (clone G18-145, BD Biosciences) and fluorescently labeled biotinylated SIVmac239 SOSIP.664 Env at room temperature for 20 min in the dark. SIVmac239 Env trimer probes were labeled with two different fluorophores, from which SIVmac239 Env dual positive memory B cells (CD3CD4CD8CD14CD20+IgMIgG+SIVmac239 SOSIP2+) were analyzed with BD FACSMelody or BD FACSFusion, and single-cell sorted, cultured, expanded in 384-well plates as described previously28 (link),29 (link). Briefly, sorted B cells were cultured with Iscove’s modified Dulbecco’s medium (IMDM) with GlutaMAX (Gibco) supplemented with 10% heat-inactivated fetal bovine serum (FBS), 1× MycoZap Plus-PR (Lonza), 100 U/mL human IL-2 (Roche), 50 ng/mL human IL-21 (Invitrogen), 50 ng/mL human IL-4 (Miltenyi), 0.1 μg/mL anti-rhesus IgG (H + L) (BioRad), and irradiated 3T3msCD40L feeder cells. Flow cytometric data were subsequently analyzed using FlowJo (v10.7.1).
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9

Detecting DPP4 Expression on Human Immune Cells

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In order to detect which subset of human immune cells expresses DPP4, freshly isolated human PBMCs were incubated with a cocktail of fluorescence labelled monoclonal antibodies, i.e. anti-CD3 (clone SP34-2, BD Biosciences); CD56 (clone MEM188, Serotec); CD20 (clone B9E9, Beckman-Coulter); HLA-DR (clone L243, Biolegend); CD14 (clone M5E2, BD Biosciences); DPP4 (clone 222113, R&D Systems); and live/dead cell viability marker (Thermo Fisher Scientific). Appropriate Ig isotype control antibodies were used as negative controls for each staining. S1 protein of MERS-CoV that recognizes DPP4, used in a previous study25 (link), was applied to compare DPP4 expression in camel and human PBMC. Cells were analyzed on a Canto II flow cytometer (BD Biosciences) and using FlowJo® software (FlowJo), then subsequently presented as mean percentage of positive cells.
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10

Macrophage Phenotyping by Flow Cytometry

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Macrophages were blocked with human Fc Block (BD Biosciences) for 10 min at 4°C in fluorescence-activated cell sorting (FACS) buffer (PBS with 2% bovine serum albumin (BSA)). Cells were subsequently stained at 4°C, washed three times with FACS buffer, fixed with 2% PFA in PBS (containing 2% BSA) for 30 min at 4°C and washed three times. Flow cytometry was performed using a BD Fortessa flow cytometer, and all data were analyzed using FlowJo, version 9.9 or higher. The antibodies used for this study were CD14 (clone M5E2, BD Bioscience), CD282 (Toll-like receptor 2 [TLR2], clone 11G7), CD284 (TLR4, clone HTA125), CD88 (clone D53-1473), and CD209 (DC-SIGN, clone DCN46) along with the appropriate isotype controls. Mean fluorescence intensities were calculated by subtracting the mean fluorescence signal of the isotype control signal from the signal of the antibody label.
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