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9 protocols using ab59195

1

Western Blot Analysis of Protein Expression

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Total cell lysate was extracted using radioimmunoprecipitation assay (RIPA) lysis buffer (Beyotime Biotechnology). Approximately 30 µg of protein was separated by 10% SDS-PAGE and transferred onto a polyvinylidene fluoride (PVDF) membrane. After blocking with 5% skimmed milk, the membranes were incubated overnight with primary antibodies against CEP55 (Abcam, ab170414), MMP2 (Abcam, ab37150), MMP9 (Abcam, ab38898), Cyclin D1 (Abcam, ab134175), p-IKKβ (Abcam, ab59195), IKKβ (Abcam, ab32135) and IκBα (Abcam, ab32518), followed by incubation with secondary antibodies. Human α-tubulin (Abcam, ab7291) or GAPDH (Abcam, ab8245) were used as the endogenous references, according to the details. Immunoreactive protein bands were visualised using the ECL method (Invitrogen), according to the manufacturer’s recommendations.
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2

Protein Expression Analysis in Colon Tissue

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Total protein was extracted from colon tissue and HT-29 cells using ice-cold RIPA lysis buffer (Wuhan Boster Biological Technology, Ltd.), and the protein concentrations were measured using a BCA protein assay kit (Boster). Equal amounts (20 µg) of protein was separated with 10% SDS-PAGE gel, then transferred onto PVDF membranes (EMD Millipore), and then blocked with 5% skim milk in TBST for 1 h at room temperature, and the membranes were incubated at 4°C overnight with primary antibodies against IKBα (ab7217; 1 : 2,000), p-p65 (ab86299; 1 : 5,000), p-IKK-β (ab59195), AQP3 (ab125219; 1 : 2,000), CFTR (ab2916; 1 : 2,000), PKA (ab38949; 1 : 2,000), and β-actin (ab8227; 1 : 1,000) all from Abcam (CA, USA). Then, the membranes were incubated with HRP-conjugated goat anti-rabbit immunoglobulin G (ab2057184; 1 : 5,000) for 1 h at room temperature. Proteins were visualized with the ECL western blotting detection reagents (Millipore). β-Actin was used as a loading control.
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3

Medicinal Plant Biomarker Analysis Protocol

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CF was picked in Foping County, Shaanxi Province in October 2018. The appearance and growing environment of CF used in this study is shown in Figure 1. A blood glucose meter was purchased from Houmei De Biotechnology Co., Ltd. (Taiwan, China). The mouse total cholesterol (TC), triglyceride (TG), high-density lipoprotein cholesterol (HDL-C), low-density lipoprotein cholesterol (LDL-C), alanine aminotransferase (ALT), aspartate aminotransferase (AST), BCA, free fatty acids (FFA), malondialdehyde (MDA), total superoxide dismutase (T-SOD), total antioxidant capacity (T-AOC), and glutathione peroxidase (GSH-PX) kits were purchased from Nanjing Jiancheng Bioengineering Institute (Nanjing, China). The enzyme-linked immunosorbent assay (ELISA) kits for mouse C-reactive protein (CRP), interleukin 6 (IL-6), tumor necrosis factor-alpha (TNF-α), and insulin were from Shanghai Elisa Biotechnology Co., Ltd. (Shanghai, China). The antibodies against phospho-GSK3β (ab131097), GSK3β (ab131356), p65 (ab16502), PEPCK (ab181170), iNOS (1b178945), COX-2 (ab179800), phospho-TAK1 (ab192443), TAK1 (ab111096), phospho-AKT (ab38449), AKT (ab8805), phospho-IKKβ (ab59195), phospho-JNK (ab124956), and JNK (ab179461) were obtained from Abcam (Cambridge, UK). The secondary antibodies for Western blotting analysis were from ZSGB-BIO (Beijing, China).
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4

Western Blot Analysis of Signaling Proteins

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After lysing in RIPA buffer, the collected total protein was separated on 12% SDS-PAGE and shifted onto PVDF membranes. 5% nonfat milk powder was added for blocking membranes. Next, the membrane was probed all night at 4 ​°C with primary antibodies against loading control GAPDH (ab8245, 1/1000; Abcam, Cambridge, MA, USA), TRAP (ab65854, 1/1000; Abcam), NFATc1 (ab175134, 1/1000; Abcam), TRAF3 (ab36988, 1/1000; Abcam), TRAF1 (ab129279, 1/1000; Abcam), TRADD (ab110644, 1/1000; Abcam), TRAF2 (ab230795, 1/1000; Abcam), ADAM17 (ab39162, 1/1000; Abcam), TNFRII (ab8161, 1/1000; Abcam), TNFRSF1A (ab19139, 1/1000; Abcam), p-IKB (ab133462, 1/1000; Abcam), IKB (ab32518, 1/1000; Abcam), TNFRSF11 (NB100-56508, 1/1000; Novus Biologicals, Littleton, CO, USA), p-IKKα (ab38515, 1/1000; Abcam), IKKα (ab32041, 1/1000; Abcam), p-IKKβ (ab59195, 1/1000; Abcam), IKKβ (ab124957, 1/1000; Abcam), p-Erk (ab214036, 1/1000; Abcam), Erk (ab184699, 1/10000; Abcam), p-MEK (ab96379, 1/1000; Abcam), MEK (ab32091, 1/1000; Abcam). On the following day, the HRP-secondary antibodies were added for 2 ​h at room temperature. The protein density was examined by the ECL luminous liquid (Pierce, Rockford, IL, USA). The assay was taken in triplicate.
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5

Immunoblotting Analysis of NF-κB Pathway

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The protein levels of p65, IKK, p‐IKKβ, IκBα, and p‐IκBα in laryngeal cancer cells were detected by performing immunoblotting. We lysed cultured or transfected cells in RIPA buffer with 1% PMSF and loaded protein onto an SDS‐PAGE minigel and transferred them onto PVDF membrane. The blots were probed with the following antibodies: anti‐p65 (ab16502; Abcam, Cambridge, MA), anti‐IKK (ab178870; Abcam), anti‐p‐IKKβ (phospho Y199; ab59195; Abcam), anti‐IκBα (#9242; Cell Signaling Technology, Danvers, MA), anti‐p‐IκBα (Ser 32; sc‐7977; Santa Cruz, Dallas, TX), anti‐β‐actin (ab6276; Abcam), and anti‐Lamin B (ab133741; Abcam) at 4°C overnight, subsequently incubated with HRP‐conjugated secondary antibody (1:5000). ECL substrates were used to visualize signals (Millipore, MA). β‐actin was used as an endogenous protein for normalization.
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6

Glycyrrhizic Acid Regulates Lipid Metabolism

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Glycyrrhizic acid (DG0006) was obtained from Chengdu DeSiTe Biological Technology Co., Ltd (China). Zinc sulfate (A602906) and galactose (A600215) were purchased from Sangon Biotech (China). PEI (E8420), Hemotoxylin and Eosin staining kit (G1120) and RIPA lysis buffer (R0010) were purchased from Solarbio Life Science (China). DSPE-PEG 2000 was produced by Xi'an Ruixi Biological Technology Co., Ltd. (China). Penicillin–streptomycin, fetal bovine serum (FBS) and Dulbecco's modified Eagle’s medium (DMEM) were produced by Gibco (USA). Free fatty acids (1170460001), palmitic acid (P0500) and Oil Red O (O0625) were obtained from Sigma (USA). p-IKKβ (Abcam, ab59195, 1:1000), IKKβ (Abcam, ab124957, 1:1000), p-p65 (ab86299), p65 (ab16502), TNF-α (ab183218), IL-6 (ab259341), ABCA1 (ab66217), CPT1 (ab234111) primary antibodies and horseradish peroxidase (HRP)-labeled secondary antibodies were obtained from Abcam (USA).
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7

Placental Protein Expression Analysis

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Frozen placenta tissues and collected cells were taken out from liquid nitrogen and lysed with RIPA lysis and extraction buffer (89901, Thermo Fisher Scientific, USA). The manufacturer's instruction was strictly followed. The protein samples were collected from the supernatants after centrifugation. Protein samples were then loaded into SDS-PAGE gels to run for electrophoresis, followed by PVDF membrane transfer and skim milk blocking processes. Postblocking membranes were incubated at room temperature with primary antibodies against PPARα (ab24509, Abcam, USA), CD36 (ab133625, Abcam, USA), acyl-CoA oxidase (ACO) (ab248375, Abcam, USA), uncoupling protein 2 (UCP2) (ab97931, Abcam, USA), NF-κB (ab131546, Abcam, USA), IKKβ (ab124957, Abcam, USA), p-IKKβ (ab59195, Abcam, USA), IκBα (ab7217, Abcam, USA), and p-IκBα (ab133462, Abcam, USA). The primary antibodies against GAPDH (ab181602, Abcam, USA) and histone H3 (ab1791, Abcam, USA) were separately used as loading controls in total cell proteins and nucleus proteins. An HRP-conjugated goat anti-rabbit secondary antibody (ab6721, Abcam, USA) was applied to the membranes after the removal of primary antibodies, followed by an incubation of 1 hour at room temperature. SuperSignal West Pico PLUS Chemiluminescent Substrate (34580, Thermo Fisher Scientific, USA) was used during the grey analysis by using an imaging system.
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8

Investigating Antioxidant Modulation of NF-κB Signaling

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Cell culture media and reagents were purchased from Gibco (Carlsbad, CA). Manganese (II) chloride (MnCl2), N-Acetyl-L-cysteine (NAC), α-tocopherol (AT), protease inhibitor cocktail, and dimethyl sulfoxide (DMSO) were purchased from MilliporeSigma (St. Louis, MO). The TNF-α inhibitor (E)-4-2-4-chloro-3-nitrophenyl (C-87) and the IKK-β inhibitor IKK16 were purchased from Tocris (Littleton, CO). The chloromethyl derivative of 2′,7′-dichlorodihydrofluorescein diacetate (CM-H2DCFDA) was purchased from Life Technologies, Inc. (Carlsbad, CA). Antibodies for EAAT2 (ab41621), IKK-β (ab32135) and phospho-IKK-β (ab59195) were obtained from Abcam (Cambridge, MA); antibodies for NF-κB p65 (sc-8008), YY1 (sc-7341), β-actin (sc-47778), and histone H4 (sc-25260) were obtained from Santa Cruz Biotechnology (Santa Cruz, CA). Bright-Glo luciferase reporter assay kits were purchased from Promega (Madison, WI), and an RNA isolation kit was obtained from Qiagen (Valencia, CA). The TNF-α standard tetramethylbenzidine (TMB) enzyme-linked immunosorbent assay (ELISA) development kit for human samples (900-T25) was purchased from PeproTech (Rocky Hill, NJ). All chemicals were prepared in phosphate-buffered saline (PBS), double-distilled H2O or DMSO, according to the manufacturer’s instructions, and diluted to working concentration in Opti-MEM prior to use.
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9

Western Blot Analysis of NF-κB Pathway Proteins

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Total protein was extracted from cultured cells and liver tissues by using ice cold RIPA lysis buffer. The protein concentration was determined by BCA protein assay kit (Solarbio, Beijing, China). 20 μg of protein was ran on a 10% SDS-PAGE gel and transferred to a PVDF (Millipore, USA) membrane. GAPDH was used as a control and non-specific bindings were blocked by 5% BSA for 40 min at room temperature. Incubates the specific primary antibodies against p-IKKβ (Abcam, ab59195, 1:1000), IKKβ (Abcam, ab124957, 1:1000), p-p65 (Abcam, ab86299, 1:1000 dilution), p65 (Abcam, ab16502, 1:1000 dilution), TNF-α (Abcam, ab183218, 1:1000 dilution), IL-6 (Abcam, ab259341, 1:1000 dilution), ABCA1 (Abcam, ab66217, 1:1000), CPT1 (Abcam, ab234111, 1:1000) at 4 ℃ overnight. After extensively washing with 100 µM PBST, peroxidase-conjugated secondary antibody (Abcam, ab205718, 1:5000) was applied to the membranes and incubated for 2 h at room temperature. Protein bands were detected by using ECL substrates (Thermal Fisher, Rockford, USA) and visualized under a ChemiDoc XRS + imager (Bio-Rad, Hercules, USA).
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