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5 protocols using his tag

1

SARS-CoV-2 S Protein Quantification

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Whole ectodomain of SARS-CoV-2 S protein with His Tag (Sino Biological Inc., Beijing, China; catalogue number: 40589-B08V1) was diluted with coating buffer (0.1 M NaHCO3, 34 mM Na2CO3) and a total of 20 ng of protein was loaded into individual wells of a 96 well plate (Nunc, Roskilde, Denmark) and allowed to coat overnight at 4 °C. Plates were then washed four times with 0.05% Tween 20 in PBS (PBST) and blocked with 5% bovine serum albumin (BSA)/PBST for 30 min before murine antibodies serially diluted with blocking buffer were added to desired wells for 1 hour. Plate were washed four times with PBST before incubation for 1 hour with HRP-conjugated goat anti-mouse IgG (Thermo Fisher Scientific) secondary antibodies diluted in blocking buffer, and washed four times with PBST. Visualisation of bound secondary antibodies was done by the addition of 3,3',5,5'-tetramethylbenzidine (TMB) substrate (Thermo Fisher Scientific) for 5 min in the absence of light and the reaction was stopped with 2 M sulphuric acid. Optical density at 450 nm (OD450nm) was determined by a Tecan (Männedorf, Switzerland) Infinite M1000 reader and normalised OD450nm was obtained by subtracting background absorbances determined in BSA coated wells.
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2

EGFR Protein Binding Assay

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Human EGFR/HER1/ErbB1 protein (His Tag, #10001‐H08H‐20; Sino Biological) and recombinant human EGFR isoform vIII protein CF (#9565‐ER‐050; R&D Systems) were immobilized in a 96‐well immunoplate (MaxiSorp; Nunc). The plate was blocked with Super Block Blocking Buffer in PBS (Thermo Fisher Scientific). DNP IgG4PE (R409K), KT112scFv‐Fc, cetuximab, 100 mg panitumumab (Takeda Pharmaceutical Co., Ltd.), and AM1 IgG4PE (R409K) diluted to required concentration using PBST were added and allowed to react at room temperature for 1 h. After washing with PBST, goat anti‐human IgG (γ chain specific) HRP conjugated (#2040‐05; SouthernBiotech) diluted in PBST was added as a secondary Ab at room temperature for 1 h. After washing with PBST, 3,3′,5,5;‐tetramethylbenzidine solution (Dako) was added and incubated. Hydrochloric acid was added to stop the reaction, and the absorbance was measured at a wavelength of 450 nm/570 nm.
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3

SARS-CoV-2 S1 Subunit Binding Assay

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HEK293T cells seeded in a 12-well plate at 4 × 105 cells per well and cultured overnight were transfected with 0.2 μg of plasmids expressing WT ACE2 or the ACE2 variants using 0.5 uL of Lipofectamine 2000. At 24 h posttransfection, the transfected cells were collected, mixed with 1.5 µg of the recombinant SARS-CoV-2 S1 subunit containing the D614G mutation fused with the His-tag (Sino Biological), and incubated on ice for 1 h. S1-bound cells were washed with 0.5% bovine serum albumin (BSA) in PBS and incubated for another 30 min on ice with anti-His-tag mouse monoclonal antibody conjugated with Alexa Fluor 488 (D291-A48; MBL) and 7-aminoactinomycin D (7-AAD; Invitrogen) for the detection of dead cells. Cells were then washed with 0.5% BSA in PBS and subjected to flow cytometry analysis with the SH800S Cell Sorter (Sony, Tokyo, Japan) to determine the proportions of live and S1-binding cells.
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4

SARS-CoV-2 Spike Protein Antibody Assay

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rSARS-CoV-2 spike protein was immobilized onto the surface of 96-well microtiter plates by direct adsorption at 2°C to 8°C, followed by washing and blocking. Serial dilutions of human serum samples, including assay quality controls (QCs), were then added to the spike-coated wells and any molecules that could bind to the spike protein, presumptively primarily spike-specific antibodies, were allowed to complex with the immobilized spike protein (for 1 hour at 24°C ± 2°C). After a plate-washing step, a fixed concentration of human ACE2 receptor (hACE2) with a polyhistidine tag (His-Tag) (SinoBiological) was added to the plate for incubation (1 hour at 24°C ± 2°C) during which the hACE2 bound to the spike protein residues with binding sites not obstructed by bound antibody. After washing, the hACE2 receptor bound to the spike protein was then detected using a mouse anti–His-Tag HRP conjugate (Southern Biotech) and a colorimetric signal generated by the addition of TMB substrate. The amount of bound hACE2 detected was inversely proportional to the amount hACE2 binding inhibitors (antibodies) in human serum; inhibitory activity is reported as 50% inhibitory titers based on a 4-PL curve fit (SoftMax Pro software).
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5

Ligand Labeling and Deglycosylation Protocol

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EGF (Sigma–Aldrich, SRP3027; 0.1 μg/μL), HGF (Peprotech, 100-39H; 0.1 μg/μL), PDGF-B (Peprotech, 100-14B; 0.1 μg/μL), SARS-CoV-2 RBD (mFc tag, Sino Biological, 40592-V05H; 0.5 μg/μL), porcine insulin (Aladdin, 12584-58-6; 0.5 μg/μL), or PLAU (His tag, Sino Biological, 10815-H08H-A; 0.2 μg/μL) was mixed with probe 1 (final concentration of 0.16 μg/μL) at a protein-to-probe mass ratio of 1:2 in 50 mM HEPES (pH 8.2) for 10 min at room temperature (RT). The required amount of ligand for three replicates was labeled at once, and aliquoted for each replicate. The ligands required for three replicates were labeled at once and divided into equal amounts for each replicate. Equal amount of BSA (Sangon Biotech), glycine or Tris was used as control. The reaction was quenched by adding glycine or Tris buffer (pH 6.8). The N-deglycosylated PLAU was prepared by incubation of PLAU with 24 units/μL peptide-N-glycosidase F (PNGase F, New England Biolabs, P0704S) in 50 mM HEPES (pH 8.2) for 1 h at 37 °C.
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