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11 protocols using bq788

1

Macitentan and Interferon-γ Protocol

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Macitentan (MedChemExpress), recombinant human interferon-γ (IFN-γ, PeproTech), sulfisoxazole (SFX) and BQ123 (Sigma-Aldrich), and bosentan, ambrisentan, and BQ788 (Tocris Bioscience) were purchased.
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2

Coronary Vasoreactivity Assay

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ET‐1 and BQ123 were obtained from Alexis Biochemicals (San Diego, CA), and BQ‐788 from Tocris Bioscience (Bristol, UK). Acetylcholine, SNP and L –NAME were purchased from Sigma (St Louis, MO). ET‐1 and BQ123 were dissolved in normal saline and stored at 220 uC. BQ788 was dissolved in dimethylsulfoxide (DMSO), with the final concentration of DMSO less than 0.01%. Preliminary experiments showed that, 0.01% DMSO did not affect coronary reactivity and left ventricular function in response to ET‐1.
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3

Fibroblast Growth Signaling Inhibitors

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Ang II, ET-1, PD123319, gallein (Gβγ inhibitor), and BQ788 were obtained from Tocris Bioscience (Ellisville, MO, USA). Recombinant human TGF-β1, valsartan, bosentan, ambrisentan, LY2109761, FR180204, and SB203580 were obtained from Sigma Aldrich (Saint Louis, MO, USA). SIS3 (Smad3 inhibitor) and FR900359 (Gαq inhibitor) were obtained from Cayman Chemical (Ann Arbor, MI, USA). Fibroblast growth medium and related cell culture reagents were obtained from Promocell (Heidelberg, Germany).
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4

Krebs-Henseleit Buffer Experiments

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Physiological Krebs Henseleit buffer of the following composition was used: NaCl 130 mM, KCl 4.7 mM, KH2PO4 1.18 mM, MgSO4.7H2O 1.17 mM, NaHCO3 14.9 mM, EDTA 0.026 mM, CaCl2.2H2O 1.6 mM and D‐glucose 5.55 mM. A high concentration of potassium chloride buffer of the following composition was used: NaCl 14 mM, KCl 120 mM, KH2PO4 1.18 mM, MgSO4.7H2O 1.17 mM, NaHCO3 14.9 mM, EDTA 0.026 mM, CaCl2.2H2O 1.6 mM and D‐glucose 5.55 mM. The incubations were performed with ET‐1 (1, 10 and 100 nM, Tocris 1160; diluted in 5% BSA + 95% deionized water), MCC950 [1 μM,44 Cayman Chemical 17,510; diluted in 5% DMSO and 95% deionized water], tiron (100 μM, Santa Cruz SC253699; diluted in deionized water), BAPTA AM [5 μg/ml,29 Tocris 2787; diluted in deionized water], lipopolysaccharide (LPS) (1 μg/ml; diluted in deionized water), adenosine 5‐triphosphate (ATP) (2 mM, Sigma‐Aldrich A6144; diluted in deionized water), BQ123 (100 nM, 1, 10 μM, Tocris 1188; diluted in deionized water), BQ788 (100 nM, 1, 10 μM, Tocris 1500; diluted in deionized water).
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5

Characterization of Signaling Pathway Modulators

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Ambrisentan, bosentan, pertussis toxin (PTX), 3-(4,5-dimethylthiazol-2yl)-2,5-diphenyl-2H-tetrazolium bromide (MTT), SB203580 (p38 MAPK inhibitor), SP600125 (JNK inhibitor), and FR180204 (ERK1/2 inhibitor) were obtained from Sigma-Aldrich (Saint Louis, MO, USA). ET-1, BQ788 (ETBR antagonist), and gallein (Gβγ inhibitor) were purchased from Tocris Bioscience (Ellisville, MO, USA). FR900359 (Gαq inhibitor) was obtained from Cayman Chemical (Ann Arbor, MI, USA). Fibroblast medium and related cell culture reagents were purchased from Cell Applications (San Diego, CA, USA). Ambrisentan, bosentan, SB2033580, SP600125, FR180204, gallein, and BQ788 were dissolved in dimethyl sulfoxide (DMSO), whereas endothelin-1 and PTX were dissolved in distilled water when preparing the stock solutions. Aliquots of stock solution were stored at −20 °C.
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6

Calcium Signaling in Melanocyte Co-cultures

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Co-cultures in modified DPBS, 1.06 mM CaCl2, were imaged for 2.5 min in streaming mode, 250 ms exposure, to determine the baseline percentage of cells with transients and the number of transients per cell. After baseline imaging, media were replaced with modified DPBS, containing 0 mM CaCl2 and/or 1 µM thapsigargin, 1 µM BQ788, 1 µM BQ123 (Tocris–BioTechne), 100 µM atropine sulfate (Sigma-Aldrich), or 100 µM atropine sulfate with 1 µM BQ788. To ensure full replacement of the imaging media with the treatment solution, 10 times the volume of the imaging chamber was perfused through the imaging chamber of a MatTek dish using manual syringe-driven delivery through a modified open perfusion insert (model RC-37F; Warner Instruments). The same field of view imaged for the baseline analysis was imaged after a 20-min incubation with the perfused solution. The fold change in percent melanocytes with one or more Ca2+ transients was determined by dividing the number of cells with transients during the treatment imaging period by the number of cells with transients during the baseline imaging period. For agonist stimulation, ACh chloride (Tocris) or endothelin-1 acetate salt (Bachem) was perfused into the chamber at 10× excess volume, to ensure complete replacement of imaging media, at the indicated time during the streaming acquisition.
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7

Ednrb Antagonist Injection in Mice

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P2 C57bl/6n mouse pups were anesthetized on ice. Two microlitres of vehicle or BQ788 (Tocris, 300 pmol) were injected into each LV using a Hamilton Syringe. BQ788 is a selective antagonist of the Ednrb receptor45 (link). The LVs were targeted by injecting at 2/5 of the distance from the lambda suture to each eye, at a depth of ~3 mm. CellTracker Green CMFDA (Molecular Probes) was used to label injection site to confirm correct targeting. Following injections, mouse pups recovered on a warming pad until body temperature, skin color, and movement returned to normal. Pups were then returned to their biological mother. For qPCR: pups were sacrificed 6 h after injections via cervical decapitation and the SVZ was microdissected for total RNA isolation. For IHC analysis: pups were sacrificed 48 h after injections via cervical decapitation and brains were drop-fixed in 4% PFA overnight at 4 °C. No toxicity or side effects of BQ788 injection were observed.
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8

Neutrophil Trafficking in Inflammation

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The complete protocol is described in the Online Supplementary Methods and illustrated in Online Supplementary Figure S1. ETA antagonist (BQ123, A.G. Scientific®, San Diego, CA, USA or ETB antagonist (BQ788, Tocris Bioscience®, Bristol, UK) were injected 10 min before (10 mg/kg) and 3 h 15 min after (5 mg/kg) intrascrotal injection of 0.5 μg tumor necrosis factor (TNFα, R&D Systems, Minneapolis, MN, USA) and neutrophils were monitored by injection of labeled phycoerythrin-conjugated anti-Ly6G antibody (BD Biosciences Pharmingen, Sparks, MD, USA).
The neutrophil rolling flux fraction, adhesion density, adhesion efficiency and transmigration were measured from 2.5 h to 5 h after the TNFα injection at 30-min intervals.
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9

Trophoblast Isolation and Treatment

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Isolated trophoblasts were seeded in gelatin pre-coated plates and maintained for 2 days in Keratinocyte medium (KCM, Gibco) with penicillin/streptomycin (Gibco), KCM supplements (Gibco) and 10% (v/v) fetal calf serum (FCS, Thermo Scientific) in a humidified incubator at 37°C, 5% CO2 in air. Prior to treatments, the cells were cultured under low serum conditions (2% (v/v) FCS) for 24 h. Thereafter, the cells were incubated in the absence (control) or presence of 10 nM or 100 nM ET-1 (Sigma Aldrich, St. Louis, MO, USA) for 24 h. The ETR subtype involved in mediating ET-1 effects was determined by pre-incubating trophoblasts with selective ETR antagonists for 2 h prior to the addition of 100 nM ET-1: BQ-123 (Tocris, Bristol, UK, 1.4 and 11.2 nM) for ETRA and BQ-788 (Tocris, 1.2 and 9.6 nM) for ETRB. Because late first trimester (GW 11 + 12) placentas gave highest trophoblast yields, these isolations were used in this set of experiments. Trophoblasts were also treated with TNF-α (Sigma Aldrich, 25 ng/ml) either alone or in combination with 100 nM ET-1, or incubated in the absence or presence of 100 nM ET-1 under three different oxygen tensions (1%, 2.5% and 20% O2) for 24 h.
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10

Vascular Reactivity Regulation Mechanisms

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NaCl, KCl, MgCl2, KH2PO4,CaCl2, NaHCO3, glucose, NaHS, l‐cysteine, phenylephrine, ACh, 5‐HT, l‐NIO (N5‐(1‐Iminoethyl)‐L‐ornithine dihydrochloride), Tris‐HCl, sodium deoxycholate, sodium dodecyl sulfate, EDTA, Igepal, protease inhibitor cocktail, BSA, Tween 20, β‐actin, methanol, ammonium acetate, acetic acid, creatine phosphokinase, creatine phosphate DEA‐NO, zinc acetate and, inosine triphosphate and stock solution of cGMP, cAMP and cIMP were supplied by Sigma‐Aldrich, (Milan, Italy). Inosine 3′‐5′‐cyclic monophoshate sodium salt was supplied by (Merck, Germany). Anti‐p‐PDE4A and anti‐p‐PDE5 were supplied by Fabgennix (Frisco, TX, USA). Anti‐PDE4A was supplied by ProteinTech (Manchester, UK). Anti‐PDE5 was supplied by Santa Cruz Biotechnology (Heidelberg, Germany). Anti‐eNOS was supplied by BD Transduction Laboratories (USA). Anti‐β‐actin was supplied by Merck (Germany). ODQ, U46619, FR 139317 and BQ788 were supplied by Tocris (Bristol, UK).
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