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P-IKK is an antibody that detects the phosphorylated form of the IKK (IκB Kinase) enzyme. IKK is a key regulator of the NF-κB signaling pathway, which plays a critical role in the inflammatory response, apoptosis, and cell survival. The phosphorylation of IKK activates the enzyme, leading to the subsequent phosphorylation and degradation of the NF-κB inhibitor IκB, allowing NF-κB to translocate to the nucleus and regulate gene expression.

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32 protocols using p ikk

1

Protein Extraction and Western Blotting

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Total protein was extracted using RIPA Lysis Buffer (Beyotime, Shanghai, China) containing 1% protease inhibitor and phosphatase inhibitor (Bimake, TX, USA). Equal amounts of protein samples were subjected to 10% or 15% SDS-PAGE (Solarbio, Beijing, China), separated by electrophoresis, and transferred to nitrocellulose filter membranes. The membranes were blocked with 5% skim milk powder for 1 h at room temperature, and then, the target membranes were incubated at 4°C overnight with primary antibodies against COL2A1, ACAN, ADAMTS4, ADAMTS5, MMP3, MMP13, p16 or p21 (1 : 1000, Abcam), ADAMTS5 (1: 250, Abcam), MMP9, iNOS, COX2, NF-κB p65, p-NF-κB p65, AKT, p-AKT, p-PI3K, PI3K, p-IKBα, IKBα, p-IKK or IKK (1 : 1000, Cell Signaling Technology), or GAPDH (1 : 5000, Proteintech). After incubated with HRP-conjugated secondary antibody for 1 h at room temperature, the signal was developed using an ECL chemiluminescence detection kit (Beyotime, Shanghai, China), and images were captured on ImageQuant Las4000mini (GE Healthcare, Tokyo, Japan).
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2

Protein Extraction and Western Blot Analysis

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Cells were harvested and proteins were extracted using cell lysis buffer supplemented with 0.3% PMSF and proteinase and phosphatase inhibitors. Proteins were separated by SDS-PAGE and transferred to PVDF membrane (Millipore, Bedford, MA, USA). After blocking in 5% skim milk powder for 2 h at room temperature, and the samples were incubated overnight at 4 °C with primary antibodies including ERK1/2 (#9102), p-ERK1/2 (#9101), JNK1/2 (#9252), p-JNK (#9251), p38 (#9212), p-p38 (#9211), Stat 3 (#9139), p-Stat 3 (#4113), FAK (#3285), p-FAK (#8556), PI3K (#3011), p-PI3K (#13857), Akt (#4691), p-Akt (#4060), IKK (#3416), p-IKK (#8766), IκB (#4814) and which were obtained from Cell Signaling Technology (Beverly, MA, USA), VEGF (sc-7269), MMP2 (sc-10736), MMP13 (sc-12363) and β-actin (sc-47778), which were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). After washing three times with TBST, the samples were incubated 1 h at room temperature with a secondary antibody. Bound antibodies were detected using the chemiluminescent substrate ECL (Pierce, Rockford, IL).
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3

Immunoblot Analysis of Signaling Pathways

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The cells were exposed to virus or IL-33 for predetermined periods of time. The cells were then washed with PBS and lysed in RIPA buffer. For western blotting, 20 μg of total protein from each sample was subject to a stacking gel and separated by a 10% SDS-PAGE separating gel using the Tris-glycine system and then transferred onto nitrocellulose membranes (Millipore, USA). The membranes were blocked in 3% BSA and then probed overnight at 4°C with antibodies specific, respectively, for ST2 (Abcam, UK), p65, p-IKK, IKK, p-IκB, IκB, p-JNK, JNK, p-ErK, ErK, p-p38, p38, and β-tubulin (Cell Signaling Technology, USA), and GAPDH (Ambion, USA). The membranes were washed and incubated with an HRP-conjugated goat anti-mouse antibody or HRP-conjugated goat anti-rabbit antibody (Pierce, USA). After washing the membranes, the blots were developed using electrochemiluminescence (Alpha Innotech, USA).
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4

Intestinal Inflammation Profiling in ApcMin Mice

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Size-matched polyp and normal tissues were collected from the small intestine of B6.ApcMin/+ mice and B6.Apc+/+ mice, respectively. Tissues were frozen in Qiagen RLT buffer (Valencia, CA) and RNA extracted with Qiagen RNeasy Mini Kits. Quantitative RT-PCR was done with SYBR Green (Quanta BioSciences, Gaithersburg, MD) to measure the expression levels of F4/80, IL-6, IL-1b, TNF and Myc in adipose or intestinal tissues (see Supplementary Table 2 for primer sequences). Tissues for Western blot analysis were immediately submerged in RIPA buffer supplemented with phosphatase and protease inhibitors, frozen in liquid nitrogen, and stored at −80°C. All antibodies (AKT, pAKT, IKK, pIKK, NFκB, p65 NFκB, STAT3, pSTAT3) were purchased from Cell Signaling Technology (Beverly, MA) and used according to manufacturer’s instructions. Homogenates from intestinal samples were used to measure intestinal inflammation using R&D Systems (Minneapolis, MN) IL-1β, IL-10, TNF-α, VEGF, and IL-23 ELISAs and the Milliplex Map Mouse Cytokine/Chemokine Panel from EMD Millipore (Temecula, CA).
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5

Western Blot Analysis of Astrocyte Proteins

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After treatment, primary astrocytes were lysed in RIPA lysis buffer (150 mmol/L NaCl, 25 mmol/L Tris–HCl, pH 7.6, 1% sodium deoxycholate, and 1% NP-40) with a phosphatase inhibitor and a protease inhibitor (Roche, Switzerland). Proteins were kept on ice and mixed with loading buffer. About 20–40 μg cell lysate was isolated by SDS-PAGE (8% or 12.5% gel) and transferred to a PVDF membrane (Millipore). PVDF membrane was blocked with 5% milk powder or 5% BSA in TBS containing 0.1% Tween-20 and incubated for 1 h at room temperature. Blots were incubated with the primary antibody at 4°C overnight. The primary antibodies used were: LRRK2 (ab133474, 1:8000, Abcam, Cambridge, UK), NLRP3 (AG-20B-0014-C100, 1:2000, AdipoGen, San Diego, CA, USA), P-IKK (2697S, 1:500, Cell Signaling Technology, Danvers, MA, USA), P-P65 (AB19870, 1:1000, Abcam, Cambridge, MA, USA), and IKB (4812S, 1:1000, Cell Signaling Technology) and incubated with the corresponding secondary antibody for 2 h. The proteins were visualized using ECL detection kits (Vazyme, China) with chemiluminescence (6000EXP, TOUCH, China).
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6

Adiponectin Signaling Pathway Analysis

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Rabbit polyclonal antibody specific for phosphate-p85, a heterodimer of phosphatidylinositol 3 kinase (PI3K), p-Akt, p-IKK were purchased from Cell Signaling Technology (Danvers, MA, USA). Rabbit polyclonal antibodies specific for PI3K, Akt, IKK, NF-κB, β-actin, and mouse polyclonal antibodies specific for OSM were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The recombinant human adiponectin was purchased from PeproTech (Rocky Hill, NJ, USA). PI3K inhibitors (Wortmannin and Ly294002), Akt inhibitor, and NF-κB inhibitors pyrrolidine dithiocarbamate (PDTC) and L-1-tosylamido-2-phenylenylethyl chloromethyl ketone (TPCK) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Small-interfering RNAs (siRNAs) against p85, Akt, and p65 were purchased from Dharmacon Research (Lafayette, CO, USA). OSM ELISA kit was purchased from R&D Systems (Minneapolis, MN, USA). DMEM, fetal bovine serum (FBS), and all the other cell culture reagents were purchased from Gibco life technologies (Grand Island, NY, USA).
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7

Berberine Biomarker Analysis Protocol

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Monoclone antibodies IR, PI3K P85, p-NF-κB p65, IKK, BACE-1, APP, α7nAChR and polyclone antibody Aβ were purchased from Abcam (Cambridge, MA, USA). Monoclone antibody p-Akt (Ser473), AKT, NF-κB, p-IKK, p-IRS-1(Ser307), and IRS-1 were purchased from Cell Signaling Technology (Boston, MA, USA). Insulin ELISA kit (EZRMI-13) and PVDF membrane (0.45 µm) were obtained from Millipore (Billerica, MA, USA). The cytokines of IL-1β, IL-18 and TNF-α were purchased from BOSTER (Wuhan, China) and the ACh kits (A105-1: tissue, A105-2: Serum) and the AChE kits (A024) were purchased from Nanjing Jiancheng Bioengineering Institute (Nanjing, China). The ladder marker was obtained from Thermo Scientific (Waltham, MA, USA). Finally, the GLU kit was purchased from Shanghai Mind Bioengineering Co., Ltd. (Shanghai, China). Berberine was obtained from Shanghai Yuanye Bio-Technology Co., Ltd. (99% pure, Shanghai, China). All other reagents purchased from located market were of analytical grade.
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8

Inflammatory Pathway Activation Assay

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NLRP3, Caspase 1, P38, P-P38, JNK, P-JNKP, ERK, P-ERK, IKK, P-IKK, IκB, P-IκB, P65, P-P65, caspase3, and cleaved caspase3 were acquired from Cell Signaling Technology (Danvers, MA). Nrf2, HO-1, SOD2, TNF-α, and GAPDH were obtained from Proteintech (Wuhan, China). COX-2, LY6G and β-actin were sourced from Abcolnal (Wuhan, China), while IL-1β and F4/80 were procured from Abcam (UK). Mastoparan M (Mast-M, purity >99%) was provided by the Shanghai Institute of Materia Medica (Shanghai, China). Colchicine (Col, purity >98%, C106738) was obtained from Aladdin Reagent (Shanghai, China). Lipopolysaccharide (LPS), phorbol 12-myristate 13-acetate (PMA), and uric acid (UA) were acquired from Sigma (USA). RPMI-1640 and fetal bovine serum (FBS) were sourced from Gibco (Shanghai, China).
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9

Western Blot Analysis of Signaling Pathways

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Equal amounts of protein were separated by SDS-PAGE on 10% gel. Proteins were transferred onto a polyvinylidene difluoride membrane. The membrane was incubated overnight with primary antibodies against p-IKK, IKK, p-p38, p38, p-ERK1/2, ERK1/2, p-JNK, JNK, p-Smad3, Smad3 (all from Cell Signaling Technology) and, fibronectin (Santa Cruz Biotechnology), incubated for 1 h with HRP-conjugated secondary antibodies (PIERCE). Protein bands were detected using the enhanced chemiluminescent plus system. Bands intensities were analyzed by NIH Image J software.
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10

Hispolon Inhibits Inflammatory Pathways

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Hispolon was acquired from BJYM Pharmaceutical. & Chemical Co., Ltd. (Beijing, China). The purity of hispolon was higher than 95% (Figure 1A). LPS, dexamethasone (DEX) and other chemicals, solvents, and reagents were obtained from Sigma-Aldrich (St. Louis, MO, USA). Enzyme-linked immunosorbent assay (ELISA) kits for the determination of cytokine secretion were acquired from BioLegend Inc. (San Diego, CA, USA). Anti-PI3k and Anti-p-AKT were obtained from Merck Millipore (Merck KGaA, Darmstadt, Germany). The antibodies against TLR4, AKT, p-JNK, ATF6, p-CaMKK2, p-LKB1, catalase, GPx, SOD, Keap1, COX-2, caspase 12, IRE1, GRP78, PERK, CHOP, Beclin 1 and LC3 I/II were obtained from GeneTex (Irvine, CA, USA). Antibodies against IKK, p-IKK, JNK, p-ERK, ERK, p-p38, mTOR and p-mTOR were purchased from Cell Signaling Technology (Beverly, MA, USA). Anti-iNOS, anti-HO-1, anti-Nrf-2, anti-PPARγ, anti-IκBα, anti-NF-κB, anti-p38, and anti-β-actin were purchased from Abcam (Cambridge, UK). Determination of protein concentration using a Bio-Rad protein assay kit (Bio-Rad Laboratories Ltd., Watford, UK).
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