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Solarix xr 7t

Manufactured by Bruker
Sourced in Germany

The SolariX XR 7T is a high-field Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometer designed for advanced analytical applications. It features a superconducting magnet with a magnetic field strength of 7 Tesla, providing high mass resolving power and precision.

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5 protocols using solarix xr 7t

1

High-Throughput Mass Spectrometry Analysis

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High-throughput single-DCV and single-LV analysis were performed on a SolariX XR 7T Fourier-transform ion cyclotron resonance mass spectrometer equipped with an APOLLO II dual MALDI/ESI source (Bruker Corp., Billerica, MA) using an m/z range of 150–4,500. Data were acquired at 1 M giving a mass resolution of 107,000 at m/z 535 and 19,070 at m/z 3,922, yielding a transient length of .721s. The instrument was operating in positive-mode using a Smartbeam-II UV laser (Bruker Corp.) set to ‘Ultra mode’, which yields a 100 μm diameter laser footprint. Each MALDI acquisition consisted of two accumulations comprised of 400 laser shots each, at a frequency of 1,000 Hz. DCV and LV stage coordinates and geometry files were generated using microMS as previously described8 (link).
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2

High-Resolution Mass Spectrometry of Metabolites

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Polar metabolites and lipids were extracted as reported previously [31 (link)]. HRMS analyses were performed in flow injection analysis (FIA) by using an Ultimate 3000 UHPLC (Thermo, Bremen, Germany) coupled to a SolariX XR 7T (Bruker Daltonics, Bremen, Germany). The flow rate was set to 10 mL/min and increased in the washing step to 300 mL/min. The instrument was tuned with a standard solution of sodium trifluoracetate (NaTFA). Mass spectra were recorded in a broadband mode in the range of 150–1500 m/z for lipids, whereas 90–800 m/z was used for polar metabolites, with an ion accumulation of 10 ms. A total of 64 scans were acquired using 4 million data points (4 M), with an approximate resolution of 400.000 at m/z 400. Drying gas (nitrogen) was set at 2 mL/min, with a drying temperature of 150 °C. Funnel amplitude was set to 90 V (polar metabolites) or 100 V (lipids), transfer was set at 0.6 MHz, and TOF 0.7 s. Both positive and negative ESI ionization was employed in a separate run. Five replicates of each injection were carried out. The instrument was controlled by Bruker FTMS Control (Bruker). FIA-FT-ICR data extraction, alignment, filtering, and annotation were performed with Metaboscape (v. 5.0, Bruker), as reported previously [31 (link)].
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3

Accurate Mass Spectrometry Analysis

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Analyses were performed in direct infusion employing a Hamilton syringe (250 μL) at a flow rate of 2 μL/min. Data were acquired on a SolariX XR 7 T (Bruker Daltonics, Bremen, Germany). The instrument was tuned with a standard solution of sodium trifluoracetate (NaTFA). Mass spectra were recorded in broadband mode in the range 100–1500 m/z, with an ion accumulation of 20 ms, with 32 scans using 2 million data points (2 M). Nebulising (nitrogen) and drying (air) gases were set at 1.0 and 4.0 mL/min, respectively, with a drying temperature of 200 °C. The instrument was controlled by Bruker FTMS Control, MS spectra were elaborated with Compass Data Analysis version 4.2 (Bruker Daltonics, Bremen, Germany) and identification of compounds based on accurate MS measurements was performed by Compound Crawler ver. 3.0 (Bruker).
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4

FIA-FT-ICR Analysis of Chemical Compounds

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FIA-FT-ICR analyses were performed in flow injection analysis using an Ultimate 3000 RSLC coupled to SolariX XR 7T (Bruker Daltonics, Bremen, Germany). The flow rate was set to 10 μL/min and a step wash of 0.3 min was performed at 300 μL/min during the wash phase. The instrument was tuned with a standard solution of sodium trifluoracetate (NaTFA). Mass spectra were recorded in a broadband mode in the range of 90–1000 m/z, with an ion accumulation of 70 ms, 32 scans were acquired using 2 million data points (2 M), with a resolution of 150.000 at m/z 400. Drying gas (N2) was set at 4 L/min, with a drying temperature of 200°C. Funnel RF amplitude was set to 100.0 Vpp and RF amplitude TOF was 350.0 Vpp, TOF was set to 0.6 ms, and RF frequency transfer optic 4 MHz. Both positive and negative ESI ionization was employed in separate runs. The instrument was controlled by Bruker FTMS Control (Bruker Daltonics).
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5

Native Protein Mass Spectrometry

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The samples were prepared in the ammonium acetate containing dialysis buffer (see under “protein expression”) at a 20 μM protein concentration, then the substrates were then added. The final volume of each sample was 100 μL. Native protein DI-FTICR measurements were performed in positive ionization mode on a Bruker SolariX XR 7T equipped with the Bruker ESI source. The mass spectrometer was externally calibrated to a mass accuracy below 1 ppm, before injecting the samples with the preinstalled syringe pump at 2 μl/min flowrate. Source and mass analyzer parameters were set as follows: dry gas flow rate 4 L/min at 200 °C, capillary voltage −4000 V, collision RF amplitude 1700 Vpp, Q1 mass 1000 and sweep excitation power 23%. 32 scans were performed accumulating for 500 ms using a total m/z range from 150-5000. The data size was set to 512k.
The acquired spectra were analyzed with the Bruker Data Analysis software using the implemented charge-state-ruler and deconvoluted by using the Maximum Entropy algorithm (Spectrum Square Associates, Inc.).
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