The largest database of trusted experimental protocols

9 protocols using anti actin

1

Quantitative Protein Detection in Plants

Check if the same lab product or an alternative is used in the 5 most similar protocols
For protein level analysis, every 100 mg of Arabidopsis seedlings or N. benthamiana leaves added 200 μl protein extraction buffers. The extracted buffer used for extracting plants is described previously (He et al., 2019 (link); Yang et al., 2021 (link)). The supernatant was separated on SDS-PAGE gels, and transferred to polyvinylidene fluoride membranes. For the protein detection, anti-Flag (1:5000; abmart, M20026) were used to detect Flag-CO proteins. Anti-Actin (1:5000; CWbiotech, CW0264) was used as a loading control.
+ Open protocol
+ Expand
2

Protein Analysis in Arabidopsis and N. benthamiana

Check if the same lab product or an alternative is used in the 5 most similar protocols
For protein level analysis, every 100 mg of Arabidopsis seedlings or N. benthamiana leaves added 200 μl protein extraction buffers. The extracted buffer used for extracting plants is described previously (He et al., 2019 , Yang et al., 2021) . The supernatant was separated on SDS-PAGE gels, and transferred to polyvinylidene fluoride membranes. For the protein detection, anti-Flag (1:5000; abmart, M20026) were used to detect Flag-CO proteins. Anti-Actin (1:5000; CWbiotech, CW0264) was used as a loading control.
+ Open protocol
+ Expand
3

Yeast Protein Extraction and Immunoblot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins from the yeast strain harboring BD-MYB14 or BD-MYB30 were extracted using a Yeast Total Protein Extraction Kit (Sangon Biotech Company, C500013) according to the manufacturer's instructions. The extracted proteins were resuspended in SDS-PAGE Loading Buffer (CWBIO Company, cw0028s), boiled for 10 min, and separated on SDS-PAGE gel for immunoblot analysis. The primary antibodies used were anti-Actin (CWBIO Company, CW0096M, diluted 2,000 times) and anti-cMYC (Lablead Company, M1002, diluted 2,000 times). The gray degree of immune bands was calculated using ImageJ software.
+ Open protocol
+ Expand
4

Protein Accumulation in Phytochrome Mutants

Check if the same lab product or an alternative is used in the 5 most similar protocols
To analyse the protein accumulation in different temperature and time, total proteins of 15 DAE NIL‐E1 PHYA2 PHYA3 plants from 25 and 35 °C were extracted with protein extraction buffer (50 mm Tris–HCl pH7.5, 150 mm NaCl, 5 mm EDTA, 0.1% Triton X‐100 and protease inhibitor cocktail). The homogenate was clarified by centrifugation at 12 000 g for 10 min at 4 °C, and aliquots of the supernatant were combined with 2× SDS sample loading buffer and heated at 95 °C for 5 min to denature the protein. The antibody anti‐phyA3 and anti‐phyA2 were previously reported (Lin et al., 2022 (link)), and anti‐actin was obtained from CWBIO (CW0264).
+ Open protocol
+ Expand
5

Protein Extraction and Co-IP Analysis of OsMYC2

Check if the same lab product or an alternative is used in the 5 most similar protocols
The rice leaves were ground into a fine powder in liquid nitrogen to extract the total proteins using the extraction buffer (25 mM Tris-HCl [pH 7.4], 150 mM NaCl, 1 mM EDTA, 1% Nonidet P-40, 5% glycerol) with 1 mM phenylmethylsulfonyl fluoride (PMSF), and Roche protease inhibitor cocktail (Roche, Basel, Switzerland) (Wang et al., 2020a) . The total proteins were then resolved in 10% SDS-PAGE gels and immunoblotted with anti-phospho-p44/p42 MAPK (Cell Signaling, Boston, MA, USA) and anti-Actin (CWbio, Beijing, China) antibodies. The intensities of the Western blot bands were measured using the ImageJ software.
For co-IP assays, the coding sequence of OsMYC2 was cloned into the pHY35S-FLAG vector to obtain the OsMYC2-FLAG construct. The resultant construct was introduced into A. tumefaciens and then infiltrated into tobacco leaves. Total proteins were extracted from the tobacco leaves with protein extraction buffer ], 150 mM NaCl, 1 mM EDTA, 1% Nonidet P-40, 5% glycerol, 1 mM PMSF, 20 mM MG132, and 13 Roche protease inhibitor cocktail) and then mixed with the OsMYB22-GST protein. co-IP was performed with FLAG-trap magnetic beads (Sigma, M8823-5ML) as previously described (Wang et al., 2020a) . Western blotting was carried out with anti-FLAG (Sigma, A8592-1MG) and anti-GST (Sigma, G7781-0.2ML) antibodies. Two replicates were carried out for this experiment.
+ Open protocol
+ Expand
6

Recombinant Protein Expression and Antibody Production

Check if the same lab product or an alternative is used in the 5 most similar protocols
MtCAS31 (full-length) and MtPIP2;7 (full-length) were expressed in the E. coli Rosseta strain using the pET-30a vector, purified and used to produce anti-MtCAS31 and anti-MtPIP2;7, respectively. The antibodies were produced by Beijing Huada Protein (http://proteomics.biogo.net/). The following antibodies were used: anti-FLAG (Sigma, F1804), anti-MYC (Sigma, M4439), anti-HA (Sigma, R3663), anti-GFP (Abmart, M20004S), anti-ATG8 (Abcam, ab4753), anti-His (Proteintech, 66,005–1-Ig), anti-GST (Proteintech, 66,001–2-Ig), anti-H+-ATPase (Agrisera, AS07-260), anti-Histone 3 (Agrisera, AS16-3968), anti-cFBPase (Agrisera, AS04-043), and anti-NPTII (Abcam, ab60018), anti-Actin (CWBIO, CW0264).
+ Open protocol
+ Expand
7

Arabidopsis Protein Extraction and Immunoblot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Arabidopsis tissues were ground in liquid nitrogen and total proteins were extracted with extraction buffer (50-mM Tris-HCl, pH 7.5, 150-mM NaCl, 10% [v/v] glycerol, 1% [v/v] Nonidet P-40, and 1 × complete protease inhibitor cocktail [Roche]). Cytoplasmic and nuclear fractions were extracted as described previously (Ryu et al., 2007) . Three percent of the cytoplasmic fractions and 10% of the nuclear fractions were used for immunoblot assays. Immunoblotting was performed following standard procedures. The antibodies used were as follows: anti-C3H14 (custom made), anti-Myc (Roche, catalog no. 10653800), anti-phosphoserine (Sigma-Aldrich, catalog no. P3430), anti-MPK4 (Abcam, catalog no. ab49780), anti-ACTIN (Cwbio, catalog no. CW0264M), anti-H3 (Beyotime, catalog no. AF0009), peroxidase-conjugated goat anti-mouse IgG (Sigma-Aldrich, catalog no. A2304), and HRP-conjugated goat anti-mouse IgG (Cwbio, catalog no. C20102S). The anti-C3H14 polyclonal antibody was produced in mice against its full-length protein and purified using an IgG-affinity chromatography column (GE Healthcare) (Institute of Genetics and Developmental Biology, Chinese Academy of Sciences).
+ Open protocol
+ Expand
8

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
For extraction of total proteins, 4- to 5-week-old rosette leaves in soil were ground to a fine powder in liquid nitrogen, and homogenized in two volumes of lysis buffer (50 mM Tris-HCl (pH 8.0), 150 mM NaCl, 0.2% Nonidet P-40, 2 mM DTT, 10% glycerol, protease inhibitor) and centrifuged for 15 min at 12,000 rpm. The supernatant was mixed with 5 × SDS loading buffer and boiled at 95 °C for 5 min. After centrifugation at 12,000 rpm for 1 min, the supernatant containing total proteins was then separated on SDS-PAGE gels. Western blot analyses were carried out using anti-GFP (TransGen Biotech HT801, Beijing, China), anti-MYC (TransGen Biotech HT101), anti-Actin (CWBIO CW0264M), and anti-MPK3 (ABclonal A0228). Western blots were developed with ECL+ (Vazyme E412-01), detected with ChemiDoc XRS+, and quantified using the ImageJ software.
+ Open protocol
+ Expand
9

Protein Expression Analysis in Cell Lysates

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell lysates were collected in cell lysis buffer (Beyotime, Shanghai, China) containing a complete protease inhibitor tablet (Roche, Basel, Switzerland) and 1 mM phenylmethanesulfonylfluoride. The protein levels were quantified with a Lowry kit (Bio-Rad, Berkeley, CA, USA) according to the manufacturer’s instructions. PVDF membranes (Millipore, Billerica, MA, USA) were incubated with the following antibodies: anti-PKM2 (SAB, Washington, MD, USA); anti-PKM1 (Proteintech); anti-HIF-1α (Cell Signaling Technology (CST), MA, USA); anti-FoxO3a (Abcam, Cambridge, UK); anti-procaspase-8, anti-procaspase-3, anti-PARP and anti-Beclin-1 (Santa Cruz Biotechnology, Santa Cruz, CA, USA); anti-cyclin D1 (CST); anti-actin (CWBIO, Beijing, China); and anti-LC3 and anti-p62 (Sigma, St. Louis, MO, USA). All HRP-conjugated secondary antibodies were purchased from Santa Cruz Biotechnology. Protein detection was performed using either Pierce ECL (CWBIO, Beijing, China) or Pierce SuperSignal Pico (Thermo Fisher Scientific, USA) reagents.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!