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3 protocols using usp24

1

Protein expression analysis by immunoblotting

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Cells were lysed in buffer with protease and phosphatase inhibitors (Roche Applied Science, Indianapolis, IN). Protein concentration was measured using the Pierce™ BCA Protein Assay Kit (Thermo Scientific, Waltham, MA), and 30 μg from each sample was electrophoresed (8 (link)). Immunoblots were incubated with polyclonal antibodies to Pim-1, PARP, Mcl-1, Bim, phospho-BADSer112, BAD, Bax, Bak, Bcl-2, Bcl-xL, USP9X, phospho-STAT5Tyr694 (Cell Signaling Technology, Danvers, MA), USP24 (Abcam, Cambridge, MA), vinculin and Trim17 (Sigma-Aldrich), SCFβ-TRCP and ARF-BP1 (Abcam) and mouse monoclonal antibodies to β-actin (Santa Cruz Biotechnology, Dallas, TX), glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (EMD Millipore) and FLAG (Sigma-Aldrich) overnight at 4°C, then with horseradish peroxidase-conjugated secondary antibodies for one hour at room temperature. Band intensities at serial time points, measured by densitometry (VisionWorks®LS, UVP, Upland, CA), were compared to pre-treatment intensity, defined as 100%. Measurements of Mcl-1 and USP9X expression in cells treated with inhibitors and combinations were repeated in at least four separate replicate experiments.
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2

Immunohistochemical Analysis of Gastric Cancer

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Tumor tissues obtained from GC patients and mice were fixed with 4% paraformaldehyde for 24 h, then embedded with paraffin, and then cut into sections of 4‐μm thickness. After dewaxing, dehydration, and thermal repair of antigen, the slices were incubated with 3% hydrogen peroxide for 20 min and 5% BSA for 40 min, respectively, and then incubated with specific antibodies.24 The antibodies of primary antibody are as follows: USP24 (1:100; Abcam), PLK1 (1:100; Abcam), Ki67 (1:200; Cell signaling Technology), and Notch 1 (1:100; Abcam).
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3

Western Blot Analysis of Protein Markers

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An appropriate amount of tissues or cells were taken from each experimental group, and 1 mL TRIzol was added, and total RNA was extracted according to the instructions.25 All samples were tested three times. The specific primers are USP24 5′‐ TGGACGCGGAGAAGAATGATG‐3′ and 5′‐ CTCGCTTGTAAGGGATGGACC‐3′, PLK1 5′‐ AAAGAGATCCCGGAGGTCCTA‐3′ and 5′‐ GGCTGCGGTGAATGGATATTTC‐3′, glucose transporter 1 (GLUT1) 5′‐ GGCCAAGAGTGTGCTAAAGAA‐3′ and 5′‐ ACAGCGTTGATGCCAGACAG‐3′, hexokinase (HK2) 5′‐ GAGCCACCACTCACCCTACT‐3′ and 5′‐ CCAGGCATTCGGCAATGTG‐3′, lactic dehydrogenase A (LDHA) 5′‐ ATGGCAACTCTAAAGGATCAGC‐3′ and 5′‐ CCAACCCCAACAACTGTAATCT‐3′, and PDK1 5′‐ CTGTGATACGGATCAGAAACCG‐3′ and 5′‐TCCACCAAACAATAAAGAGTGCT‐3′.
Then SDS‐PAGE electrophoresis was performed to separate the SDS denaturing glue containing the target band and transfer it to nitrocellulose membrane for membrane transfer. Subsequently, they were enclosed with 5% skim milk for 90 min and incubated with specific antibodies. The antibodies were USP24 (1:1000; Abcam), P16 (1:1000; Abcam), CDK4 (1:1000; Abcam), Cyclin E (1:1000; Cell signaling Technology), PLK1 (1:2000; Abcam), Notch 1 (1:1000; Abcam), Hes 1 (Cell signaling Technology), and HEY1 (Cell signaling Technology).
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