For E2F1 knockdown, lentiviral particles were produced using 293T cells co-transfected with pMD2.G (Addgene #12259), and psPAX2 (Addgene #12260) and LentiCRISPR v.2 targeting construct for E2F1 knockout or pTRIPZ-shE2F1 for inducible E2F1 knockdown using Mirus
TransIT-LT1 Transfection Reagent. Target cells were infected with lentivirus-containingsupernatant and selected with 2.5 μg/ml puromycin. Expression of the inducible shRNA from pTRIPZ-shE2F1 was induced by addition of 1 μg/ml doxycycline.
For NAPRT knockdown, CRC119 cells were transfected with 20 nM of NAPRT-targeting siRNA (Dharmacon or ThermoFisher Scientific) or control siRNA using
Lipofectamine RNAiMAX transfection reagent (ThermoFisher Scientific).
For PncA overexpression, CRC119 cells were transiently transfected with pcDNA-HA-pncA using
GenJet Ver.II transfection reagent (Signagen).
Shats I., Williams J.G., Liu J., Makarov M.V., Wu X., Lih F.B., Deterding L.J., Lim C., Xu X., Randall T.A., Lee E., Li W., Fan W., Li J.L., Sokolsky M., Kabanov A.V., Li L., Migaud M.E., Locasale J.W, & Li X. (2020). Bacteria boost mammalian host NAD metabolism by engaging the deamidated biosynthesis pathway. Cell metabolism, 31(3), 564-579.e7.