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4 protocols using skepinone l

1

UPLC-MS-MS Quantification of Deuterated and Non-Deuterated Standards

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Deuterated and non-deuterated LM standards for ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS-MS) quantification were purchased from Cayman Chemical/Biomol GmbH (Hamburg, Germany). Archazolid A was isolated from Archangium gephyra as previously described (17 (link)). Bafilomycin A1 was obtained from Sigma-Aldrich (Taufkirchen, Germany), CP-690,550 and GSK-2033 were obtained from Tocris Bioscience (Bristol, UK), JQ-1 was from AdooQ Bioscience (Irvine, CA, USA), LY294002 was from Cytoskeleton (Denver, CO, USA), skepinone-L and Torin 1 were from Cayman chemical (Ann Arbor, MI, USA), and U0126 was from Enzo Life Sciences (Farmingdale, New York, USA). AS1517499 and all other reagents were obtained from Sigma-Aldrich (Taufkirchen, Germany) unless mentioned otherwise.
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2

Modulating Mast Cell Activation Pathways

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BMMCs, PCMCs or the MC/9‐NFAT and MC/9‐NF‐κB reporter MC lines 38 were washed and seeded in IL‐3‐free media at a density of 1x106 cells/mL. After 1 h, cells were treated with cyclosporine A (4 µg/ml) (CaN inhibitor, CaN‐i), the Ca2+ chelator BAPTA‐AM (5 µM) (Ca2+ chel.) for Ca2+ depletion, the IKK VII (1 µM) (IKK inhibitor, IKK‐i), U0126 (10 µM) (ERK1/2 inhibitor, ERK‐i) (all from Merck), the selective P2X7 inhibitor, A438079 (50 µM) (ATP‐antagonist, ATP‐ant.) (Sigma), skepinone‐L (1 µM) (p38 inhibitor, p38‐i) (Cayman) or respective amounts of the vehicles (DMSO) for 30 min. All used inhibitors did not influence cell viability. Subsequently, cells were stimulated with rmIL‐33 (50 ng/mL) (PeproTech) and/ or if not otherwise shown with ATP (500 µM) (Sigma). For Western blotting experiments, BMMCs were stimulated for different time points (as shown in the figures). For ELISA experiments, supernatants were collected after 24 h, and for degranulation assays (CD107α surface expression), MCs were stimulated for 30 min. To investigate the activation of NFAT or NF‐κB in the MC/9 reporter MC lines [38 (link)], we stimulated for 8h.
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Modulation of IL-33-Induced LTC4 Release in Basophils

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BMMCs (1 × 106 cells/ml) were seeded in IL‐3‐ and serum‐free media. After 1 h, cells were pre‐treated with the inhibitors cyclosporine A (4 µg/ml) (CaN inhibitor, CaN‐i), the Ca2+ chelator BAPTA‐AM (5 µM) (Ca2+ chel.) for Ca2+ depletion, U0126 (10 µM) (ERK1/2 inhibitor, ERK‐i) (all from Merck) or skepinone‐L (1 µM) (Cayman) (p38 inhibitor, p38‐i) or vehicle for 30 min. Afterwards, BMMCs were stimulated with IL‐33 (50 ng/ml) (PeproTech) or ATP (500 µM) (Sigma) or both in combination for 24 h. Supernatants were transferred to pre‐coated ELISA plates and the competitive LTC4 ELISA was performed as described in the instructions (Cayman).
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4

Compound Preparation for Cell Culture

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Vacuolin-1 (#20425), YM201636 (#13576), Apilimod (#19094), SB202190 (#10010399), BIRB-796 (#10460), Skepinone-L (#16974), LY2228820 (#23259), Tak-715 (#26170) from Cayman Chemical, and WX8 and NDF from SPECS were dissolved in DMSO (Sigma Cat# D2650) at 20 mM stock concentration and diluted as necessary to be added to cell culture medium at 1:1,000 dilution. An equal volume of DMSO (vehicle) was added to control cells.
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