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2 protocols using epr5788

1

Antibody Validation for Cell Signaling

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Antibodies specific to the following proteins were used in this study. Primary antibodies: GFP (A11122, Molecular Probes), β-tubulin (ab6160, Abcam), integrin α2 (MCA2025, Abd Serotech), integrin α2 (EPR5788, Abcam), integrin α2 (AB1936, Millipore), active integrin β1 (12G10; Ab30394, Abcam), inactive integrin β1 (4B4; 6603113, Beckman Coulter), AP2μ (EP2695Y, Novus Biological), and AP2 α-adaptin (MA1-064, Pierce) and transferrin AlexaFluor568-conjugated (T-23365, Invitrogen). Secondary antibodies: AlexaFluor488 and AlexaFluor568-conjugated IgGs (A21202, A21206, A10042, A10037 (immunofluorescence), Invitrogen), horseradish peroxidase (HRP)-conjugated anti-biotin antibody (7075, Cell Signaling Technology), and HRP-conjugated IgGs (NA931, NA934 (immunoblotting), GE Healthcare). Validation for all antibodies can be found on the manufacturers’ websites. In addition, the antibodies specific to AP2 adaptin and AP2μ were validated in this manuscript by silencing as shown in the figures. Original images of immunoblots used in this study can be found in Supplementary Data Set 1.
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2

Western Blot Analysis of Integrin Subunits

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The cells cultured in monolayers were washed with phosphate-buffered solution (PBS, Sigma-Aldrich, St Louis, MO, USA) lysed in SDS-sample buffer (Bio-Rad, Oslo, Norway, Cat# 1610791) with 3% of 2-β-mercaptoethanol (Sigma-Aldrich, Cat# M7154) and sonicated using a Vibra-Cell™ ultrasonic processor (Sonics and Materials, Newtown, CT, USA). The cell lysates were subjected to (6% acrylamide) SDS-PAGE electrophoresis after boiling for 5 min., and the proteins were transferred to PVDF membranes using the iBlot® system. The membranes were blocked with 5% non-fat dry milk (Marvel, UK) in Tris-buffered saline containing 0.1% Tween20 (TBS-T), incubated with primary mouse anti-human α11 antibody Mab 210F4 [70 ] or rabbit monoclonal anti-human α2 (EPR 5788, Abcam, Cambridge, MA, USA, Cat# ab133557) or mouse monoclonal anti-human α1 antibody (R&D Systems, Minneapolis, MN, USA, Cat# MAB 5676) and anti-β-actin (AC-74, Sigma-Aldrich, Cat# A5441) overnight at 4 °C. Following the incubations, the membranes were washed in TBS-T three times for 10 min and incubated with goat anti-mouse- or goat anti-rabbit-HRP-conjugated secondary antibodies for 1 h at room temperature. The membranes were developed while using the ECL™ western blotting systems kit (GE Healthcare) and photographed using the ChemiDoc XRS device and the Quantity One 1-D Analysis Software (Bio-Rad).
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