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78 protocols using cd11c cre

1

Genetic Manipulation of Autophagy Genes

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Atg5f/f and
Atg5f/f-Lyz2cre+/−mice were generated as described previously in an enhanced barrier
facility17 (link),56 (link).
Becn1f/f-
Lyz2cre+/−57 (link),
Fip200f/f-
Lyz2cre+/−58 (link),
Atg7f/f-Lyz2cre+/−51 (link), and
Atg16l1f/f-
Lyz2cre+/− 59 (link) were generated in the same way as
Atg5f/f-
Lyz2cre+/−.
Becn1f/f-
CD11c-cre+/−, and
Becn1f/f-
Mrp8-cre+/− were generated by breeding
Becn1f/f to CD11c-
cre
+/− (#007567) and
Mrp8-cre+/− (#021614) from the Jackson
Laboratory. Rag1−/− (#002216),
Ifngr−/− (#003288), and
Casp1/11−/− (#016621) mice were
from the Jackson Laboratory.
Rubicon−/− knockout mice were
kindly provided by Doug Green and Jennifer Martinez25 (link). All mice used for experimental
procedures were backcrossed in house to B6/J except for
Rubicon−/− mice. 8–12 weeks
of age and sex-matched littermates were used unless specified otherwise and were
subject to randomization. Statistical consideration was not used to determine
mouse sample sizes. Mice were housed and bred at Washington University in St.
Louis in specific pathogen-free conditions in accordance with federal and
university guidelines, and protocols were approved by the Animal Studies
Committee of Washington University.
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2

Murine Plasmodium Infection Model

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Female mice of C57BL/6 (WT), Aim2−/−, Casp1−/−, Myd88−/−, Nlrp3−/−, Il1r1−/− and Zbtb46-DTR mice were purchased from The Jackson Laboratory. Traf3flox/flox mice were kindly gifted from Dr. Shao-Cong Sun (University of Texas, MD Anderson Cancer Center) and cross with CD11c-cre (The Jackson Laboratory) to generate Traf3f/f CD11c-cre mice, Irf3−/−:Irf7−/− mice were from Dr. Kate Fitzgerald (University of Massachusetts Medical School) and Dr. Tadatsugo Taniguchi (The University of Tokyo), and crossed with C57BL/6 mice to get Irf3−/− mice. For plasmodium infection, 0.5 × 106 iRBCs (otherwise, indicated specifically in the figure legend) suspended in 200 µl PBS from the donor mice were intraperitoneally injected into experimental mice. All mouse-related procedures were performed according to experimental protocols approved by the Animal Care and Welfare Committee at Houston Methodist Research Institute and in accordance with NIH-approved animal study protocol LMVR-11E.
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3

Genetic Manipulation of Autophagy Genes

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Atg5f/f and
Atg5f/f-Lyz2cre+/−mice were generated as described previously in an enhanced barrier
facility17 (link),56 (link).
Becn1f/f-
Lyz2cre+/−57 (link),
Fip200f/f-
Lyz2cre+/−58 (link),
Atg7f/f-Lyz2cre+/−51 (link), and
Atg16l1f/f-
Lyz2cre+/− 59 (link) were generated in the same way as
Atg5f/f-
Lyz2cre+/−.
Becn1f/f-
CD11c-cre+/−, and
Becn1f/f-
Mrp8-cre+/− were generated by breeding
Becn1f/f to CD11c-
cre
+/− (#007567) and
Mrp8-cre+/− (#021614) from the Jackson
Laboratory. Rag1−/− (#002216),
Ifngr−/− (#003288), and
Casp1/11−/− (#016621) mice were
from the Jackson Laboratory.
Rubicon−/− knockout mice were
kindly provided by Doug Green and Jennifer Martinez25 (link). All mice used for experimental
procedures were backcrossed in house to B6/J except for
Rubicon−/− mice. 8–12 weeks
of age and sex-matched littermates were used unless specified otherwise and were
subject to randomization. Statistical consideration was not used to determine
mouse sample sizes. Mice were housed and bred at Washington University in St.
Louis in specific pathogen-free conditions in accordance with federal and
university guidelines, and protocols were approved by the Animal Studies
Committee of Washington University.
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4

Conditional Sec22b Knockout Mice

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Mice with a FRT-flanked conditional gene trap inserted between exons 2 and 3 of Sec22b were obtained from the European Conditional Mouse Mutagenesis Program (EUCOMM; Sec22btm1a(EUCOMM)Wtsi) and crossed to mice with FLP recombinase expressed under the control of human β-actin promoter (005703, The Jackson Laboratory) to create the Sec22bfl allele. EIIa-Cre (003724, The Jackson Laboratory), Vav1-Cre (008610, The Jackson Laboratory), and CD11c-Cre transgenic mice (008068, The Jackson Laboratory), were bred to Sec22bfl/fl mice to create Sec22bfl/fl; EIIa-Cre+, Sec22bfl/fl; Vav1-Cre+, Sec22bfl/fl; CD11c-Cre+ mice. Mice acquired from Jackson Laboratory had been backcrossed to the C57/BL6 background as described in their catalog. Mice acquired from EUCOMM were generated using the C57/BL6 background. All animals were cared for under regulations reviewed and approved by the University of Michigan Institutional Animal Care and Use Committee, based on University Laboratory Animal Medicine guidelines.
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5

Conditional Knockout Mice for Prdm1

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Prdm1f/f mice (11 (link)) were crossed with CD11c-Cre or R26CreER mice, both purchased from The Jackson Laboratory, to generate Prdm1f/fCD11c-Cre+/− (CKO-11c), Prdm1f/fER-Cre+/− (CKO-ER), and their littermate control Prdm1f/fCD11c-Cre−/− (Ctrl-11c) or Prdm1f/fER-Cre−/− (Ctrl-ER) mice. To avoid the autoimmune phenotypes of female CKO-11c mice (9 (link)), only male CKO-11c and male littermate control mice were used in all experiments. Tlr7 knockout (KO) (12 (link)) and Blimp-1-yellow fluorescent protein (YFP) reporter mice (13 (link)) were purchased from The Jackson Laboratory, and Tlr9 KO (obtained from Dr. Shizuo Akira) (14 (link)) mice were paired with wild-type C57BL/6 mice (purchased from the National Laboratory Animal Center, Taipei, Taiwan). All mice were housed and bred in the specific pathogen free conditions in the animal facility of Institute of Cellular and Organismic biology at Academia Sinica. Animal experimental protocols were approved by IACUC of Academia Sinica.
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6

Floxed Mouse Models for Immunology Studies

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Tsc1 floxed [51 (link)], mTor floxed [52 (link)], and Rptor floxed [53 (link)] mice; Cd11c-cre [54 (link)] and LysM-cre mice [55 (link)]; and OT-I and OT-II TCR transgenic mice [56 (link),57 (link)] were obtained from Jackson Laboratories. In all experiments, littermates carrying floxed alleles but without Cre recombinase were used as controls (WT).
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7

TIM-3 Conditional Knockout Mouse Model

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Six-to eight-week-old C57BL/6, Cd11ccre, Zbtb46cre, Cd4cre, E8icre, Lysmcre, Cx3cr1cre and Foxp3-ERT2cre mice were purchased from the Jackson Laboratory. Havcr2fl/fl mice were generated as described in supplementary materials. TIM-3 conditional knockout mice were generated by crossing to the above cre lines. For knockin/knockout alleles (Lysmcre) the appropriate controls were used; that is, Havcr2fl/+ × Lysmcre+/−, for all other cre lines fl/fl mice were used as controls. For experiments with Foxp3-ERT2cre mice, mice were orally gavaged with 8 mg tamoxifen 3 days before tumour implantation and every 3 days thereafter for the duration of the experiments. Havcr2+/+Foxp3-ERT2cre were used as an additional wild-type control but results were comparable to Havcr2fl/fl and were therefore not included. Deletion efficiency was determined by flow cytometry (not shown). Animal experiments were done in accordance with the guidelines of the institutional Animal Care and Use Committee (IACUC) at Brigham and Women’s Hospital and Harvard Medical School. All animals were euthanized before reaching humane endpoint, with tumour growth no greater than 2 cm in any one direction or of a total of 400 mm2 overall. Mice of both sexes were used throughout the study; sex-matched and age-matched (8–12 weeks) controls were used in individual experiments.
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8

Generation and Characterization of Zranb1-Deficient Mice

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Zranb1-targeted mice(Zranb1tm1a(EUCOMM)Hmgu) were generated at Knockout Mouse Project (KOMP) by targeting exon 3 of Zranb1 gene using a FRT-LoxP vector (Supplementary Fig. 1a). Zranb1-floxed mice (in C57BL/6 × 129/Sv mixed background) were generated by crossing the Zranb1-targeted mice with FLP deleter mice (Rosa26-FLPe; Jackson Laboratory). The Zranb1-floxed mice were further crossed with CMV-Cre, Cd4-Cre, Cd11c-Cre, and Lyz2-Cre mice (all from Jackson Laboratory, C57BL/6 background) to generate Zranb1 germline KO, T-cKO (Zranb1f/fCd4-Cre), DC-cKO (Zranb1f/fCd11c-Cre), and M-cKO (Trabidf/fLyz2-Cre) mice, respectively. Heterozygous mice were bred to generate littermate controls and KO (or conditional KO) mice for experiments. Outcomes of animal experiments were collected blindly and recorded based on ear-tag numbers of the experimental mice. Genotyping was performed as indicated in Supplementary Fig. 1. Mice were maintained in specific pathogen-free facility, and all animal experiments were conducted in accordance with protocols approved by the Institutional Animal Care and Use Committee of the University of Texas MD Anderson Cancer Center.
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9

Mouse Strains for Immunological Studies

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C57BL/6, Rag2-/-, Tbx21-/-, CD11c-Cre, Irf8flox/flox, and Tbx21flox/flox mice were obtained from Jackson Laboratory (Bar Harbor, ME) and Rag2-/-γc-/- mice were obtained from Taconic (Rensselaer, NY). All control and experimental mice were age- and sex-matched within all individual experiments. This study included both male and female mice, and the data derived from male and female mice identified no sex-specific differences in the performed experiments.
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10

Generation and Characterization of Zranb1-Deficient Mice

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Zranb1-targeted mice(Zranb1tm1a(EUCOMM)Hmgu) were generated at Knockout Mouse Project (KOMP) by targeting exon 3 of Zranb1 gene using a FRT-LoxP vector (Supplementary Fig. 1a). Zranb1-floxed mice (in C57BL/6 × 129/Sv mixed background) were generated by crossing the Zranb1-targeted mice with FLP deleter mice (Rosa26-FLPe; Jackson Laboratory). The Zranb1-floxed mice were further crossed with CMV-Cre, Cd4-Cre, Cd11c-Cre, and Lyz2-Cre mice (all from Jackson Laboratory, C57BL/6 background) to generate Zranb1 germline KO, T-cKO (Zranb1f/fCd4-Cre), DC-cKO (Zranb1f/fCd11c-Cre), and M-cKO (Trabidf/fLyz2-Cre) mice, respectively. Heterozygous mice were bred to generate littermate controls and KO (or conditional KO) mice for experiments. Outcomes of animal experiments were collected blindly and recorded based on ear-tag numbers of the experimental mice. Genotyping was performed as indicated in Supplementary Fig. 1. Mice were maintained in specific pathogen-free facility, and all animal experiments were conducted in accordance with protocols approved by the Institutional Animal Care and Use Committee of the University of Texas MD Anderson Cancer Center.
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