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Xylose lysine deoxycholate agar xld

Manufactured by Thermo Fisher Scientific
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Xylose Lysine Deoxycholate Agar (XLD) is a selective and differential culture medium used for the isolation and identification of Salmonella and Shigella bacteria in clinical and food samples. It contains xylose, lysine, and deoxycholate as key components that inhibit the growth of Gram-positive bacteria and allow for the differentiation of Salmonella and Shigella colonies.

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14 protocols using xylose lysine deoxycholate agar xld

1

Microbial Analysis of Food Samples

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The enumeration of TPC, Escherichia coli and Staphylococcus aureus counts and detection of Salmonella and Bacillus cereus were performed according to ICMSF (23 ). Twenty-five grams of the 300 g of food sample was homogenised with 225 mL of buffered peptone water for 2 min in a sterile stomacher bag using a stomacher. Homogenised samples were then serially diluted with 1% sterile peptone water up to 10−4 dilutions. Then, 0.1 mL of the samples at each dilution factor was transferred onto their selective agars. Plate count agar (PCA; Oxoid, UK) was used for TPC, eosin methylene blue agar (EMB; Oxoid, UK) was used for Escherichia coli, and Baird Packer Agar (BP Agar; Oxoid, UK) was used for Staphylococcus aureus. The detection of Salmonella and Bacillus cereus was performed using xylose lysine deoxycholate agar (XLD; Oxoid, UK) and Bacillus cereus selective agar base (BCSA; Oxoid, UK), respectively. All medium plates were incubated at 37 °C for 24 h–48 h, except the PDA plates which were incubated at 37 °C for 5 days. Only 25–250 colonies on the plates were counted using a colony counter (Today’s Instruments, Taiwan). Results were expressed as colony forming units per gram (CFU/g). Isolates microbial were identified by cultural, morphological and physiological characteristics as described in media supplier (Oxoid, UK).
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2

Isolation and Identification of Salmonella spp.

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Isolation of Salmonella spp. was firstly performed by pre-enrichment of samples in lactose broth (Merck, Darmstadt, Germany) at 37 °C for 24 h. For selective enrichment, pre-enriched cultures were transferred into Selenite Cystine (SC) broth (Merck, Darmstadt, Germany) and Tetrathionate Brilliant Green bile (TBG) broth (Merck, Darmstadt, Germany), and incubated at 35 °C for 24 h. Then, these cultures were streaked onto Bismuth Sulphite agar (BSA) (Oxoid, Basingstoke, UK), Xylose Lysine Deoxycholate Agar (XLD) (Oxoid, Basingstoke, UK), and Hektoen Enteric agar (HEA) (Oxoid, Basingstoke, UK) as selective media and incubated at 35 °C for 48 h. Typical colonies were cultured on the slants of Tryptic soy agar (TSA) (Merck, Darmstadt, Germany) and subjected to biochemical tests using Lysine Iron agar (LIA) (Merck, Darmstadt, Germany), Triple Sugar Iron (TSI) agar (Merck, Darmstadt, Germany), Sulfide-Indole-Motility (SIM) medium (Merck, Darmstadt, Germany), and Christensen’s Urea agar (Merck, Darmstadt, Germany) (Table S1) [89 ].
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3

Biofilm-Inhibiting Silver Nanoparticles

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The materials used in this work are Tryptic Soybean Broth (TSB; MERCK, Germany), Tryptic Soy Agar (TSA; MERCK, Germany), silver nitrate (AgNO3; Techno Pharmachem, India) 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT; Sigma Aldrich, US) , Dulbecco's Modified Eagle Medium (DMEM; Serana, Europe), Human Skin Fibroblast cell line (HSF), Human breast cancer cell line (MCF-7), Human liver cancer cell line (HepG2), Fetal Bovine Serum (FBS; Serana, Europe) and acidic isopropanol (Thermo fisher, US). In addition, Specific bacterial strains were used in this study to illustrate the effect of the biofilm-AgNPs. Salmonella enterica subsp. enterica serotype Typhi (S. enterica) NCTC 160 was grown at Xylose Lysine Deoxycholate agar (XLD; Oxoid, England), Escherichia coli (E. coli) ACTT 8739 was grown at Eosin Methylene blue (EMB; Oxoide, England), P. aeruginosa ACTT 27853 was grown at Cetrimide (MERCK, Germany), Staphylococcus aureus (S. aureus) ACTT 25923 was grown at Mannitol Salt Agar (MSA; Oxoide, England) and Bacillus cereus ACTT 14579 was grown at MYP agar (MERCK, Germany). In addition, phage ZCSE9 was used for S. enterica with an initial titer of 2 × 109 PFU/mL.
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4

Stool Sample Processing and Bacterial Identification

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One-gram stool sample was collected from each patient using sterile screw capped tubes containing transport media [9 mL buffered peptone water (Oxoid, UK)] and transported to Jimma University, Research and Postgraduate Laboratory for microbial analysis. After 24 hr incubation at 37°C, 1 mL of the sample was transferred into 10 mL selenite F broth (Oxoid, UK) and incubated. A loopful of culture was transferred onto xylose-lysine-deoxycholate agar (XLD) (Oxoid, UK) and incubated. The typical colonies were then further characterized based on colony morphology (Shigella appears as pink to red colonies on XLD, while Salmonella appears as red with black center). The cell morphology of pure culture was assessed by Gram staining. The morphological study includes cell shape, cell arrangement, presence or absence of endospore, and motility. Results of the isolates Gram reaction test were further confirmed with the rapid KOH method [13 (link)]. The isolates capability of catalase production, hence formation of bubbles, was checked using a 3% H2O2 solution.
For identification of Shigella and Salmonella spp., all suspected colonies were inoculated into appropriate biochemical media including Triple Sugar Iron Agar (TSIA), Lysine Iron Agar (LIA), Urea Agar (UA), Simmon's Citrate Agar (SCA), and Sulfide Indole Motility (SIM) medium.
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5

Isolation and Identification of Salmonella

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Serial dilutions (10-fold) of the clinical and environmental samples were made in 1% sterile peptone water (Difco, UK). Then 0.1 mL of each dilution was inoculated into Salmonella selective medium, Selenite F broth (Oxoid, UK), to enhance the growth of Salmonella spp. and inhibit the other contaminants, and incubated at 37 °C for 24–48 h. After enrichment, the growth was transferred to the media recommended for Salmonella spp. including: Xylose lysine deoxycholate agar (XLD) (Oxoid, UK) and Deoxycholate citrate agar (DCA) (Oxoid, UK), and incubated at 37 °C for 24 h.9
Salmonella colonies, characterized by producing non-lactose fermenting pale colored colonies with black centers on DCA medium and pink-red colonies with black centers on XLD medium, were picked up and sub-cultured several times on fresh plates until homogeneous colonies were obtained. The colonies were confirmed as Gram negative bacteria using Gram staining procedures, and glycerol cultures of all of the isolates were prepared and stored at −80 °C for further analysis. The isolated bacterial strains were subjected to identification using biochemical tests and Vitek® 2-C15 automated system for bacterial identification (BioMerieux Inc., France), according to manufacturer's instructions. Furthermore, bacterial identification was confirmed by 16S rDNA sequencing analysis.
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6

Salmonella Growth under Temperature Control

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All samples (10 mL) were inoculated with 0.1 mL Salmonella spp. cocktail to obtain an initial density of 3.5 ± 0.5 log CFU/mL. The inoculated samples were stored at 5, 10, 15, 20, 25, 30, and 37 °C under isothermal conditions. To measure bacterial cell counts, each sample was taken at different time intervals for each temperature, and 10 mL sterilized saline was added to each sample and homogenized via vortexer. Ten-fold dilutions of samples were plated in duplicate onto Xylose Lysine Deoxycholate Agar (XLD, Oxoid, Basingstoke, UK), and the agar plates were incubated at 37 °C for 24 h. Typical colonies were counted and converted to log CFU/mL.
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7

Microbiological Analysis of Food Samples

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Samples were homogenized using a laboratory blender (InterscienceTM BagMixer® 400, Saint-Nom-la-Bretèche, France). Subsequently, Salmonella, Escherichia coli, total coliform bacteria, and total yeast and molds enumeration were performed.
The protocol to isolate Salmonella was performed according to the Bacteriological Analytical Manual (BAM) method: Salmonella, Chapter 5 (FDA). Suspicious colonies on solid media were confirmed with the VITEK 2 system (Biomérieux, Durham, NC, USA) following the manufacturer’s instructions.
For the quantification of Salmonella, the samples were homogenized with 90 mL of 0.1 g/100 mL Sterile Peptone Water (PW; Oxoid Ltd., Basingstoke, UK) using a stomacher blender; additional decimal dilutions were applied to this original suspension using PW-containing tubes, and a volume of 100 µL of proper dilutions were used to inoculate Tryptic Soy Agar (TSA; Oxoid Ltd., Basingstoke, UK) and Xylose Lysine Deoxycholate Agar (XLD; Oxoid Ltd., Basingstoke, UK) plates. Agar plates were incubated at 35 °C for 24 h, and typical Salmonella colonies were quantified to obtain the population from each sample (log CFU g−1).
Coliform bacteria were analyzed following APHA/CMMEF methods 9.91–9.94 based on an MPN technique.
The enumeration of yeast and molds was analyzed following the respective method of the Bacteriological Analytical Manual [32 ].
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8

Stool Sample Analysis for Salmonella and Shigella

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Prior to subjecting the sample to culture media, physical analysis of the stool sample was performed in order to check whether the sample was diarrheal or not, presence of blood, pus and mucus. Children with diarrhea, blood, mucus were included. Diarrhea stool specimen was inoculated using sterile wire loop on MacConkey Agar (Oxoid, Ltd), and Xylose lysine- Deoxycholate agar (XLD) (Oxoid Ltd). The inoculated plates ware incubated at 37 °C for 24 h (SOPs) [12 ]. After 24 h incubation, the plates were checked for colony characteristics of Salmonella and Shigella species. Furthermore, colorless to yellow colonies on MacConkey Agar and pink to red colonies Xylose Lysine Deoxycholate (XLD) (Oxoid Ltd) [12 ] agar were typically considered as Non-lactose fomenters. In addition, the colonies considered as non-lactose fomenters were further identified by biochemical tests to confirm the identification to genus level of the pathogens Biochemical tests such as klingler iron agar (KIA), motility indole, lysine medium, simon’s citrate agar, and unease test were used [13 ].
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9

Isolation of Salmonella from Poultry Carcasses

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At the time of the experiment, whole carcasses were transferred into sterile plastic bags containing 400 ml of buffered peptone water (BPE; Liofilchem, Teramo, Italy). Bags were vigorously massaged and shaken for 1 min at room temperature. Rinse solutions were transferred to bottles and incubated at 37°C for 24 hr. After incubation, a 0.1 ml aliquot was transferred to 10 ml of Rappaport‐Vassiliadis Broth (RV: Oxoid, Basingstoke, UK) and incubated for 24 hr at 42°C. A loopful (10 μl) was then plated on xylose‐lysine‐deoxycholate agar (XLD; Oxoid) and incubated at 37°C for 24 hr.
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10

Microbial Analysis of Food Samples

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Microbiological analysis was conducted at 4 ± 2 • C on days 1, 3, and 6. A temperature of 4 ± 2 • C was chosen as the threshold temperature that is more favorable for the survival of the food-borne pathogen Salmonella enterica. First, 45 mL sterile saline solution of a 0.1% concentration was used to dilute the 5 g samples in an Erlenmeyer flask. Then, homogenization of the samples for 30 min in the shaking device (Burgwedel, Germany, GFL 3031) followed. The following microbial species were assessed: Coliforms were detected in the bacterial culture medium Violet Red Bile Lactose Agar (VRBL, Oxoid, Basingstoke, UK), with an incubation period at 37 • C for 24 to 48 h. Total viable counts (TVC) were cultivated on Plate Count Agar (PCA; Oxoid, Basingstoke, UK) and incubated at 30 • C for 48-72 h. Xylose Lysine Deoxycholate Agar (XLD; Oxoid, Basingstoke, UK), underwent incubation at 37 • C for 24-48 h. Subsequently, eight colonies per Petri dish were briefly re-inoculated on Trypton Soya Agar (TSA; Oxoid, Basingstoke, UK) for 24 h.
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