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7 protocols using ab23760

1

Protein Expression Analysis of Apoptosis and UPR Pathways

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The total protein was extracted by the modified RIPA buffer (P0013B; Beyotime, Shanghai, China), and the concentration was quantitated by the BCA protein assay kit (P0010; Beyotime, Shanghai, China). Then, the total protein was separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). Next, the proteins were transferred onto polyvinylidene fluoride (PVDF) membranes, and then the membranes were blocked in 5% skim milk diluted with TBST for 1 h at room temperature and probed with primary antibodies, including MFG-E8 (R&D Systems, AF2805, 1 : 500), BCL2 (Abcam, ab117115, 1 : 500), BAX (Abcam, ab216494, 1 : 500), cleaved caspase-3 (Abcam, ab90437, 1 : 500), GRP-78 (Abcam, ab230508, 1 : 500), XBP-1 (Abcam, ab230508, 1 : 500), ATF-6 (Abcam, ab203119, 1 : 500), ATF-4 (Abcam, ab23760, 1 : 500), CHOP (Abcam, ab23760, 1 : 500), p-PI3K (Abcam, ab125633, 1 : 500), PI3K (Abcam, ab154583, 1 : 500), p-AKT (Abcam, ab18785, 1 : 1000), AKT (Abcam, ab28422, 1 : 500), and β-actin (Abcam, ab209857, 1 : 1000) at 4°C overnight. Then, the membranes were incubated with a secondary rabbit anti-rabbit antibody (1 : 1000) the next day at room temperature for 1 h. The ImageJ software was employed for quantitation of the immunoreactive bands.
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2

Immunohistochemical Analysis of ATF4 in Pancreatic Tissue

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Paraffin sections of pancreatic tissues from each group were dewaxed, dehydrated with alcohol gradient, washed with tap water for 2 min, treated with H2O2 containing 3% methanol for 20 min, washed with distilled water for 2 min, and washed with 0.1 M phosphate buffer saline (PBS) for 3 min followed by antigen retrieval. The sections were added with normal goat serum blocking solution (C-0005, Shanghai Haoran Biological Technology Co., Ltd., Shanghai, China) at 4 °C overnight, added with primary antibody to ATF4 (ab23760, 1:250, Abcam, Cambridge, UK) at 4 °C overnight, and then added with goat anti-rabbit immunoglobulin G (IgG) secondary antibody at 37 °C for 20 min. Next, the sample was added with horseradish peroxidase-labeled streptavidin protein working solution (0343-10000U, Beijing Yimo biological technology Co., Ltd., Beijing, China) at 37 °C for 20 min. After that, the sample was developed by 3,3′-diaminobenzidine (ST033, Guangzhou Weijia technology Co., Ltd., Guangdong, China), stained by hematoxylin (PT001, Shanghai Bogoo Biotechnology Co., Ltd., Shanghai, China) for 1 min, returned to blue color by 1% ammonia, dehydrated by a certain concentration of alcohol, cleared by xylene, mounted by neutral resin and observed under a microscope.
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3

Immunostaining of Trabecular Meshwork Tissue Sections

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For frozen sections, TM tissues were fixed with 4% paraformaldehyde for 1 h and then dehydrated with a series of sucrose solutions (10–30%) before optimum cutting temperature embedding. Cross sections of the TM were obtained using a cryostat (Leica Biosystems, Buffalo Grove, IL, USA). Sections were immunostained using anti-ATF4 (1:100, #ab23760, Abcam), anti-CHOP (1:100, #sc-575, Santa Cruz Biotechnology), and anti-CD62E (1:500, #550290 from Pharmingen (San Diego, CA, USA) or #S9555 from Sigma-Aldrich) antibodies overnight at 4° C, followed by Cy3-conjugated secondary antibody from Invitrogen, or Alexa Fluor 568 from Thermo Fisher Scientific (Waltham, MA, USA), or followed by biotinylated secondary antibody and fluorescein isothiocyanate avidin. Nuclei were mounted with DAPI-mounting solution. Slides were visualized and photographed under a fluorescent microscope (Axioplan 2 imaging, Carl Zeiss, Heidenheim, Germany).
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4

Western Blot Analysis of UPR Markers in Saponin-Treated HEK Cells

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HEK cells were grown to 60% confluence in DMEM with 10% FBS. Medium was changed to F10 with 15 μg/ml saponin and aminoglycoside antibiotics were added and cells were incubated for 24 h. Cells were lysed in hypotonic buffer (20 mM HEPES pH 7.5, 10 mM KCl, 3 mM Mg acetate, 1 mM DTT and 10 μg/ml DNase I) and ultrasonicated. Lysates were centrifuged (13 000 r.p.m., 10 min) and protein concentration in the supernatant was measured by the Micro BCA Protein Assay Kit (Thermo Scientific). Ten micrograms of total protein were resolved on 10% SDS-polyacrylamide gels and blotted on nitrocellulose membranes, which were probed with specific antibodies. Amersham ECL Prime Western Blotting Detection Reagent (RPN2232; GE Healthcare, Glattbrugg, Switzerland) was used as a substrate for the horseradish peroxidase (HRP). The specific antibodies used in this study were: anti-BiP antibody (Abcam, ab21685); anti-GRP94 antibody (Abcam, ab87886); anti-ATF4 antibody (Abcam, ab23760); anti-β-actin antibody (A1978-200UL; Sigma-Aldrich); HRP-conjugated goat anti-rabbit (Invitrogen, G-21234) and goat anti-mouse antibodies (Invitrogen, A10551).
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5

Western Blot Analysis of Heart Tissue Proteins

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Proteins were extracted from snap-frozen heart tissues using RIPA buffer (Solarbio Science Technology Co, Beijing, China). Protein separation was performed by electrophoresis on 10% SDS–PAGE gels, and the proteins were transferred to polyvinylidene difluoride membranes and incubated with the corresponding antibodies at 4 °C for 1–2 days. Antibodies against IRE1α (#3364EA39) were purchased from Invitrogen (Carlsbad, CA, USA). Antibodies against sirtuin 1 (SIRT1) (#13161-1-AP), Caspase 3 (#19677-1-AP), Bcl2 (#26593-1-AP), Bax (#50599-1-AP) and β-Tubulin (#10094-1-AP) were purchased from Proteintech Group (Rosemont, USA). Antibodies against transforming growth factor-β1 (TGF-β1) (#3711 S), CHOP (#P35638), pERK1/2 (#P27361), and ERK1/2 (#P28482) were purchased from Cell Signaling Technology (Boston, MA, USA). Antibodies against ATF4 (#ab23760) and MAPK10 (#ab126591) were purchased from Abcam (London, England). Then, the membranes were incubated with horseradish peroxidase-conjugated secondary antibodies (1:3000–1:5000) for at least 1 h at room temperature. All blots were developed using the ECL Plus chemiluminescence system, and signal intensities were analyzed with a Gel-Pro 4.5 Analyzer (Media Cybernetics, USA).
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6

Dual Fluorescent Detection of FOXO1, CREB1, and ATF4 in BM-MSCs

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Double immunofluorescence labeling was performed in BM-MSCs (n=3-4 mice/group). BM-MSCs at passage 2 were fixed in 4% PFA for 20min at RT and incubated with mouse monoclonal FOXO1 Ab (14952, Cell Signalling Technology, MA, US), rabbit polyclonal anti-phospho CREB1 conjugate (06-519-AF647, Merck, Germany) and rabbit polyclonal activating transcription factor-4 (ATF4) (ab23760, Abcam, UK) in Ab dilution buffer (1x PBS/1% BSA/0.3% Triton™ X-100) overnight at 4°C, and washed with PBS. Both types of primary Ab labelled BM-MSCs (CREB1:FOXO1) and (ATF4: FOXO1) were incubated with secondary antibodies, FITC-conjugated anti-mouse IgG (1:250), Cy3-conjugated rabbit antimouse IgG (1:200) for 2hrs at RT in the dark. Labeled BM-MSCs were visualized and imaged with an Eclipse Ti confocal microscope (Nikon, Japan) using 60X objective.
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7

Western Blot and Co-IP Analysis of UPR Markers

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Western blot and Co-IP were performed as described previously (L. Wang et al., 2018) (link). The primary antibodies for IRE1α (ab37073, 1:1000), p-IRE1α (ab48187, 1:1000), PERK (ab79483, 1:1000), eIf2α (ab264254, 1:1000), ATF4 (ab23760, 1:1000), p38 (ab170099, 1:1000), p-p38 (ab178867, 1:1000) and p-Akt (ab38449, 1:800) were purchased from Abcam. Antibodies against ATF6α (p50) (#65880, 1:1000), p-PERK (#3179, 1:1000) and p-eIf2α (#3398, 1:1000) were purchased from Cell Signaling. Antibodies about CREB3L2 (14514-1-AP, 1:800), Akt (10176-2-AP, 1:2000), GRP78 (11587-1-AP, 1:2000), GFP tag (50430-2-AP, 1:1500), CHOP(15204-1-AP, 1:500), SREBP1 (14088-1-AP, 1:1000) were purchased from Proteintech. β-Actin (AF5003, 1:1000) was purchased from Beyotime. was purchased from Santa Cruz. Samples were subjected to standard SDS-PAGE, and the resulting bands were transferred onto polyvinylidene difluoride membrane for visualizing specific proteins. The ECL Plus detection system (Thermo Scientific, USA) was used for detection.
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