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4 protocols using dabco

1

Electrochemical Characterization of Modified Electrodes

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Zn(NO3)2·6H2O, (98%) and H2BDC, (98%) were bought from Sigma-Aldrich (Burlington, MA, USA), DMF, (≥99.8%) was purchased from Merck (Darmstdt, Germany), (DABCO, 98%) was purchased from Alfa Aesar (Lancashire, UK). All other compounds used throughout this study were of an analytical grade. The electrochemical experiments were performed using a three-electrode system-CHI model 824B workstation with a screen printed carbon electrode (SPCE)/chemically modified SPCE as a working electrode, Ag/AgCl (in 3 M KCl) as a reference electrode, and Pt wire as an auxiliary electrode. SPCE was purchased from Zensor R&D (Taichung, Taiwan). A phosphate buffer solution (0.1 M, pH 7 PBS) was prepared by mixing 0.1 M, NaH2PO4, and Na2HPO4. To compare the various electrodes performance, 5 mM of FeCN solution used as a probe. Briefly, the FeCN solution was prepared using 5 mM of K3[Fe(CN)6] and K4[Fe(CN)6], and 0.1 M, KCl used as a supporting electrolyte. For H2O2 detection, 100 mM of H2O2 prepared from 9.8 M of H2O2 (30 wt%).
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2

Synthesis of Phenylcarbamates via Isocyanate Reactions

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The preparation of methyl phenylcarbamate and butyl phenylcarbamate was performed by reacting phenyl isocyanate (PhNCO, ≥99%, Acros Organics, Geel, Belgium) with the corresponding alcohol, methanol (MeOH, HPLC grade, VWR Chemicals, Debrecen, Hungary) and butan-1-ol (BuOH, ≥99%, VWR Chemicals, Debrecen, Hungary) in excess, respectively, and acetonitrile (ACN, ≥99%, VWR Chemicals, Debrecen, Hungary) was used as a solvent. To achieve a low water content, BuOH (≥99%, VWR Chemicals, Debrecen, Hungary) and ACN (≥99%, VWR Chemicals, Debrecen, Hungary) were stored in over 20% (m/V) activated molecular sieves (3 Å, beads, VWR Chemicals, Debrecen, Hungary) for at least two days [18 (link)]. The products were purified by flash column chromatography (hexane/ethyl acetate) on silica. The studied catalysts were 1,4-diazabicyclo[2.2.2]octane (DABCO, 98%, Alfa Aesar, Kandel, Germany); 1,2-dimethylimidazole (1,2-DMI, 98%, Alfa Aesar, Kandel, Germany); N-ethylmorpholine (NEM, 98%, Alfa Aesar, Kandel, Germany).
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Quantifying Apoptosis and Proliferation in OCT Biofilms

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OCT embedded biofilm wounds, sectioned at 10 μm, were blocked in appropriate serum and incubated in primary antibodies O/N at 4°C. The antibodies used were the early apoptosis marker, goat anti-caspase 3 (R&D Systems), and the cell-proliferation marker, mouse anti-Ki67 (Novocastra). Alexa Fluor conjugated secondary antibodies (Thermo Fisher Scientific) were used to detect antibody binding. Sections were counterstained in DAPI and mounted in Mowiol 4-88 with DABCO (Thermo Fisher Scientific). Fluorescent images were taken as above using the DAPI, FITC and TEXAS RED filters.
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4

Visualizing Porcine Wound Biofilm

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Samples embedded in optimal cutting temperature media (OCT, CellPath) were cryo-sectioned at 10 μm. Gram-Twort, Acridine Orange (AO; Sigma-Aldrich), and Concanavalin A (ConA, Thermo Fisher Scientific) staining were used to visualize porcine wound biofilm load. A modified Gram-Twort stain was carried out. Here, sections were fixed in methanol at -20°C for 10 min, stained with Crystal Violet and Gram’s Iodine solutions (both Sigma-Aldrich), differentiated in 2% (v/v) acetic-alcohol and counterstained with a 0.2% (w/v) neutral red and 0.2% (w/v) fast green (9:1) solution (Sigma-Aldrich). Sections were differentiated again, rapidly dehydrated in 100% ethanol and mounted with Pertex® mounting medium (CellPath). Images were captured at ×100 magnification on a Nikon E400 microscope with SPOT camera (SPOT imaging). For fluorescent visualization, methanol-fixed sections were incubated in AO solution (2 mg/ml) for 5 min at RT and rinsed in dH2O, or incubated in ConA (50 μg/ml) at 4°C O/N and counterstained with DAPI (Thermo Fisher Scientific). Mowiol 4-88 (Sigma-Aldrich) containing DABCO (Thermo Fisher Scientific) was used for mounting. Fluorescent images were taken on a Zeiss Axio Vert. A1 microscope with AxioCam| cm1 camera (Carl Zeiss Microscopy Ltd) at ×40 magnification. Gram-Twort biofilm thickness analysis was performed in ImageJ v.1.6 (NIH).
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