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4 protocols using alexa fluor 555 antibodies

1

Immunofluorescence Staining of PC-3U Cells

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PC-3U cells were cultured in six-well dishes in the presence of RPMI-1640 medium supplemented with 10% FBS, 1% L-glutamine, and 1% penicillin and streptomycin. Cells were transfected with the respective plasmids; after 24 h, cells were starved in RPMI-1640 medium supplemented with 1% FBS, 1% L-glutamine, and 1% penicillin and streptomycin, and after an additional 18 h, cells were stimulated with 10 ng/ml of TGFβ1.
Cells were washed in PBS and fixed in 4% paraformaldehyde, followed by permeabilization in 2% Triton X-100. Cells were blocked in 5% BSA. After blocking, cells were incubated with primary antibody for 1 h, followed by incubation with secondary donkey anti-rabbit Alexa Fluor 555 antibodies or goat anti-mouse Alexa Fluor 488 antibodies (Invitrogen). After staining, cells were mounted in medium with 4’,6-diamidino-2-phenylindole (DAPI) to visualize cell nuclei. Images were taken with a confocal microscope with an oil immersion 63X lens. Zen software was used to analyze the data.
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2

Skin Immune Cell Isolation Protocol

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Tissues were harvested at the indicated times. Lymph nodes were mechanically disrupted, and tail skin was incubated with 5U/mL Dispase II (Roche) for 1h at 37°C. Epidermis was removed and mechanically dissociated using 70μm filters and syringe plungers. Dermis was incubated with 1mg/mL collagenase IV and 2mg/mL DNAse I (Sigma Aldrich) for 1h at 37°C before mechanical dissociation. All samples were filtered prior to staining. Naïve REX3 mice were taken down at each time point and used to set gates for chemokine reporter analysis, and UltraComp beads (eBioscience) stained with Alexa Fluor 555 antibodies (Invitrogen) or Pacific Blue antibodies (Biolegend) were used to set up compensation for RFP and BFP. All murine flow cytometry samples were blocked with 2.4G2 and stained with LiveDead Blue (Invitrogen, 1:1000). The following antibodies were used at a 1:200 dilution: CD45 APC-Cy7 or AF700, Thy1.1 FITC, CD3 APC, CD8 PerCP-Cy5.5, CD49f PerCP-Cy5.5, CD31 PE-Cy7, CD11c PE-Cy7, Langerin APC, and CD11b PerCP-Cy5.5 (Biolegend).
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3

Quantifying Cell Proliferation in Breast Cancer Cell Lines

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Approximately 2.4 × 104 MCF-7 cells or 1.2 × 104 T47D cells were seeded per well in a 48-well plate. The following day, cells were treated with reduced growth media containing 4-OHT, pyrvinium or DMSO. After 48 h of treatment, cells were fixed in 4% (w/v) paraformaldehyde (PFA). Cells were washed three times in PBS, then permeabilized for 15 min in PBS containing 0.1% (v/v) Triton X-100. Cells were washed three times in PBS, then were blocked for 1 h in PBS containing 3% (w/v) BSA. Cells were incubated overnight at 4 °C with Ki67 antibodies (ThermoFisher Scientific, cat # RM-9106-S1, 1:200) diluted in PBS containing 3% (w/v) BSA. Cells were washed three times in PBS, then incubated for 1 h with donkey anti-rabbit Alexa Fluor® 555 antibodies (Invitrogen, cat # A-31572, 1:500) and DAPI (Sigma, cat # D9542, 1:1000) diluted in PBS containing 3% (w/v) BSA. Cells were washed three times in PBS, then imaged using an Invitrogen EVOS® M5000 Imaging System with a 10× objective. The percentage of Ki67-positive cells was determined using the “cell counter” plugin in ImageJ version 2.0.0 software.
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4

Whole-mount Embryo Immunofluorescence Staining

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Immunofluorescent staining was performed on whole-mount embryos using HNK1, PAX7, and N-Cadherin antibodies, according to methods previously described [键入文字]
1:100) antibodies, overnight at 4 o C on a shaker. After extensive washing, the embryos were incubated with anti-mouse or -rabbit Alexa Fluor 555 antibodies (2µg/ml, Invitrogen) overnight at 4 o C. After immunofluorescent staining, all the embryos were counterstained with DAPI (Invitrogen, 1:1000) for 30min at room temperature.
All immunofluorescent staining was performed in replicates from at least 4 embryos.
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