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3 protocols using pro il 1β

1

Fibroblast Protein Expression Analysis

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Fibroblast levels of relevant proteins were assessed by Western blot as previously described (39 (link)). Briefly, fibroblasts were lysed and homogenized with lysis buffer [10 mM Tris (pH 7.4), 150 mM NaCl, 5 mM EDTA, 1% Triton X-100, 10 mM NaF, 1 mM Na3VO4, 10 mg/mL leupeptin, 10 mg/mL aprotinin, and 20 mM PMSF]. Proteins from each sample were separated on 10–15% sodium dodecyl sulfate-polyacrylamide gels (SDS-PAGE) and transferred to polyvinylidene fluoride (PVDF) membranes. After blocking with 3% bovine serum albumin (Wisent Inc, St-Bruno, QC, Canada), the membranes were probed with primary antibodies against mouse NLRP3, caspase 1 p20 (Adipogen, San Diego, CA, USA) at 1:500 dilution; pro-IL-1β (R and D Systems, Minneapolis, MN, USA) at 1:500 dilution; nitrotyrosine (Santa Cruz, Dallas, TX, USA) at 1:1,000 dilution; and β-actin (Santa Cruz, Dallas, TX, USA) at 1:2,000 dilution. After treatment with appropriate secondary antibodies, the specific bands were detected with an enhanced chemiluminescence (ECL) system and quantified with an imaging densitometer (Bio-Rad Laboratories, Inc., Hercules, CA, USA).
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Western Blot Analysis of NLRP3 Inflammasome

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Lung tissues were homogenized in RIPA in the presence of a protease inhibitor cocktail (Roche, Indianapolis, IN, USA) and Phosphatase Inhibitor Cocktail (Roche). The protein concentrations were determined by a BCA kit (Pierce, Rockford, IL, USA). Equal concentrations of protein (25 μg) were separated by SDS-PAGE on 12% acrylamide gels. The primary antibodies used were as follow: NLRP3 (Adipogen, San Diego, CA, USA), caspase 1 (p20) (Adipogen), IL-1β, pro-IL-1β (R&D Systems, Minneapolis, MN, USA), TLR2 (Millipore, Billerica, MA, USA), AANAT (Sigma), ASMT (Abcam, Boston, MA, USA) and GAPDH (KANGCHEN Biotech, Shanghai, China) for 1 h at 37°C, followed by at 4°C overnight. Blots were washed thrice with TBST and probed with appropriate secondary antibodies for 1 h at room temperature. After washing three times, the immune-reaction was analyzed using the ECL detection system (Pierce). The band density was determined by ImageJ software (NIH, Bethesda, MD, USA).
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3

Western Blot Analysis of NLRP3 Inflammasome Activation

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BMDMs stimulated as per the experiment were lysed in buffer containing 20 mM Tris-HCl pH 7.4, 150 mM NaCl, 1% NP-40 and 5 mM EDTA with fresh 1x Halt Protease inhibitor cocktail (Promega #1861279). Homogenized lysates were resolved on 14% SDS-PAGE, and transferred to 0.2 μM PVDF membrane. Membranes were blocked with 5% non-fat dry milk (w/v) and probed with antibodies diluted in 1X PBS and 0.05% Tween-20 (v/v). The antibodies used were pro-IL1β (R&D Systems, AF-401-NA), caspase-1 (Santa Cruz Biotechnology, sc-514), gasdermin D (Abcam, AB209845), β-actin (Sigma), Nlrp3 (Enzo Life Sciences, clone cryo-2), Gapdh (Sigma, G9295), Flag (Sigma, A8592), KDEL (Enzo Life Sciences 10C3), Tom20 (Abcam, AB186734), VDAC (Cell Signaling, 4866S), HSP60 (Santa Cruz, 13115). The Mm47 antibody was custom made by Thermo Fisher against the immunogenic residue 22–47 of Mm47. Membranes were probed with horseradish peroxidase-conjugated anti-mouse (Bio-Rad, 172–1011) and anti-rabbit (Bio-Rad, 170–6515) or anti-Goat (Bio-rad, 172–1034) and developed using ECL chemiluminescent substrate (Pierce).
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