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8 protocols using multi well plate

1

Culturing Murine Macrophage Cell Line RAW264

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The murine macrophage cell line RAW264 (Riken, RCB0535) was used in the present study. Cells were cultured at 37°C under a humidified atmosphere of 5% CO2–95% air in Eagle’s minimal essential medium (Nissui) containing kanamycin (60 μg/ml) and 10% (v/v) heat-inactivated fetal bovine serum (FBS, Biowest, Miami, FL). Cells were detached and seeded in each well of a multi-well plate (Becton, Dickinson and Company, Franklin Lakes, NJ) as described below.
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2

Toxicity Evaluation of Larval Inhibitors

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The toxicity of the inhibitors on 1st instar larvae was assessed using the protocol of Pridgeon et al. [22 (link)]. In brief, eggs were hatched in dH2O under vacuum at room temperature for 2 h in a 250 ml beaker. The beaker was transferred to a rearing chamber (28°C) and 1st instar larvae were collected 24 h later. For a given treatment, 5 larvae were transferred to the well of a 24 well Falcon MULTIWELL plate (Becton Dickinson Labware, Franklin Lakes, NJ) containing 995 μl of H2O with a gap junction inhibitor and 5 μl of food solution. The food solution consisted of 0.013 g of ground Tetramin fish food (Tetra United Pet Group, Blacksburg, VA) suspended in 1 ml of dH2O. Stock solutions of the inhibitors were dissolved in dH2O and diluted within wells to achieve the desired concentrations (1 ml total volume per well). Plates were returned to rearing conditions and after 24 hours the larvae were assessed. The efficacy of a concentration was measured as the percentage of treated larvae in a well that were dead by 24 h. Larvae were considered dead if they did not move when disturbed with a 10 μl pipette tip.
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3

Cell Culture Reagent Procurement

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Reagents were purchased from Sigma Chemical Co (St. Louis, MO, USA), tissue culture flasks, dishes, and multi-well plates were from Falcon Orange Scientific (Graignette Business Park, Belgium), culture media and supplements for both tissue and cell lines were from Gibco BRL (Carlsbad, CA, USA).
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4

Macrophage Polarization Protocol

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BMDMs were plated non-TC treated multi-well plates (Falcon, Agawam, MA, USA) at a density of 100,000 cells/cm2 and cultured in BMDM media + 20 ng/mL M-CSF. For polarization, cells were stimulated for 24 h with 100 ng/mL lipopolysaccharide (LPS) (LPS-EK Ultrapure, InvivoGen, San Diego, CA, USA) and 10 ng/mL IFN-γ (Peprotech, Rocky Hill, NJ, USA) for M1 profile, or 20 ng/mL IL-4 (Peprotech, Rocky Hill, NJ, USA) for M2 profile.
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5

Seeding ESCs for Chimeric Aggregation

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ESC lines were seeded on a low adhesion dish, PrimeSurface Dish 35 mm (MS‐9035X, Sumitomo Bakelite, Japan) or low‐cell‐adhesion 96‐well plates with U‐bottomed conical wells (9,000 cells per well, 100 ml; MS‐9096U, Sumilon PrimeSurface plate, Sumitomo Bakelite) using differentiation medium. After 24 h, floating aggregates were collected and plated on multi‐well plates (Falcon). To make chimeric cell aggregates, ESC lines were mixed in ratios as indicated.
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6

TNC Regulation of Dermal Fibroblast Activation

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HMFs were purchased from ScienCell Research Laboratories (lot numbers 4066 and 15990; Carlsbad, CA). Human dermal fibroblasts (HDFs) derived from the abdominal skin of a 50yeareold female were obtained from Lifeline Cell Technology (lot number 02081; Oceanside, CA). Cells were grown in FibroLife Serum Free Medium (Complete Kit; Lifeline Cell Technology). Sixteen hours after seeding at 1.5 Â 10 4 cells/ cm 2 in multiwell plates (BD Falcon, Franklin Lakes, NJ), 10 mg/mL of TNC purified from the conditioned medium of U-251MG 34 was added to the medium. After a 4-day culture, cells were analyzed by immunoblotting and immunofluorescence staining. Heparin (grade I-A; Sigma-Aldrich, St. Louis, MO), SB-505124 (TGF-b receptor I kinase inhibitor; Calbiochem, La Jolla, CA), or SIS3 (SMAD3 inhibitor; Cayman Chemical, Ann Arbor, MI) was added 30 minutes before the TNC treatment.
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7

Scutellaria baicalensis Root Cultivation

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The plant material (roots) of Scutellaria baicalensis was collected from a local region of Hangzhou and was authenticated by a well-known botanist. Minimum essential medium (MEM), horse serum, and fetal calf serum were obtained from Gibco. Multiwell plates were bought from Falcon. Laminin, poly-L-lysine, L-glutamine, Glu, glucose, NMDA, polyethylenimine, and cytosine arabinoside were purchased from Merck. [3H]MDL 105,519 and [3H]MK-801 were purchased from Amersham Biosciences, Inc., and MOLEKULA Ltd., respectively. All other chemicals were of reagent grade.
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8

Chimeric Embryonic Stem Cell Aggregation

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ESC lines were seeded on a low adhesion dish, PrimeSurface Dish 35 mm (MS-9035X, Sumitomo Bakelite, Japan) or low-cell-adhesion 96-well plates with U-bottomed conical wells (9,000 cells per well, 100 mL; MS-9096U, Sumilon PrimeSurface plate, Sumitomo Bakelite) using differentiation medium. After 24 h, floating aggregates were collected and plated on multiwell plates (Falcon). To make chimeric cell aggregates, ESC lines were mixed in ratios as indicated.
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