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17 protocols using ab131260

1

Exogenous Protein Localization in Stimulated Neutrophils

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Exogenous recombinant MPO (Novoprotein, CS73) and NE (Sigma, E8140) were immunolabelled using anti‐MPO (Abcam, ab208670; 1:100) and anti‐NE (Abcam, ab131260; 1:250) antibodies and then fluorescently labelled with secondary anti‐rabbit fluorescent antibodies. The fluorescently labelled proteins were coincubated with normal neutrophils for 30 min. The neutrophils were then stimulated with PMA for 30 min, and the fluorescence localization of the exogenous proteins was observed under confocal microscopy.
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2

Immunofluorescence Staining of Cytoskeletal Components

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Cells were fixed in 4% paraformaldehyde, permeabilized with 0.1% Triton X‐100, blocked with 5% BSA and stained with the following: anti‐cit H3 (Abcam, ab219407, 1:1000), anti‐CD63 (Abcam, ab271286, 1:200), anti‐MPO (Abcam, ab208670, 1:100), anti‐NE (Abcam, ab131260, 1:250), and anti‐laminB1 (Abcam, ab16048; 1:1000), anti‐CD44 (Abcam, ab6124, 1:200), anti‐pERM (CST; 1:500), DAPI (Solarbio, D6470) and phalloidin (Abcam, ab176759). The cell membrane was stained with a PKH26 Red Fluorescent Cell Linker Mini Kit (Sigma, MINI26) according to the provided protocol before the cells were fixed. After staining, the cells were observed using a Zeiss LSM 900 confocal microscope.
Live cells were placed in a small incubator for visualization and fixed on the microscope stage. The incubator provided a constant temperature of 37°C and an atmosphere of 5% CO2.
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3

Protein Expression Analysis of PBMCs

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We collected 5 ml of peripheral blood from individuals in cohort 2. PBMCs were isolated with density-gradient centrifugation, then washed twice and lysed in RIPA buffer (Sigma-Aldrich, MO, USA) supplemented with protease and phosphatase inhibitor cocktail (Thermo Fisher Scientific, MA, USA). Protein concentration of lysates was determined using the BCA Protein Assay Kit according to the manufacturers’ instructions (A53225, Thermo Fisher Scientific, MA, USA). Cell lysates were boiled for 10 min at 95°C with SDS and subjected to 12% SDS–PAGE, and then transferred to nitrocellulose membranes (HATF00010, Millipore). The membranes were blocked and then incubated with anti-ELANE (ab131260, Abcam), anti-CD14 (DF13278, Abcam), anti-S100A11(ab169530, Abcam), anti-PGAM1(DF12693, affinity), anti-SERPINB10(DF9894, affinity), anti-BST2 (DF3846, affinity), and anti-β-actin (AF7018, affinity) overnight at 4°C. The membranes were washed and incubated with anti-rabbit or -mouse IgG-HRP (S0001, affinity) for 1 h. Protein bands were visualized with the western blotting detection system Tanon-5200 (Bio-Tanon, China). Gray value analysis was done by ImageJ (v.1.50g, NIH) software.
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4

Quantification of Neutrophil Extracellular Traps

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After treatment with 4% paraformaldehyde for 20 min, NETs were incubated with anti-myeloperoxidase (MPO) antibody [EPR20257] (ab208670, Abcam, Cambridge, MA), and anti-neutrophil elastase (NE) antibody [EPR7479] (ab131260, Abcam), respectively. When the nucleus was stained, the NETs were observed under the Olympus IX81 inverted fluorescence microscope and the images were collected. Three different visual fields were randomly selected under the same conditions, and the total cells number in a single visual field was calculated by Image J 1.8.0 software (National Institutes of Health, USA). The NETs productivity was calculated according to the ratio of the NETs number in visual field to the total cells number.
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5

Immunostaining of Neutrophil Markers

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Serially cut frozen slides were air-dried and fixed in prechilled 100% acetone). Slides were rinsed in distilled water and then washed in TBS-T. Endogenous peroxidase activity was quenched via incubation with 5% (v/v) H2O2 (Sigma-Aldrich, H3410) in dH2O. After 30 minutes, the slides were washed and incubated in serum-free protein block (DAKO, X0909) for 30 minutes, after which excess liquid was removed. Serial sections were then incubated with 1:1000 (v/v) anti-MPO (mouse, monoclonal; Abcam, ab25989) or 1:1000 (v/v) anti-NE (rabbit, monoclonal; Abcam, ab131260) or 1:500 (v/v) anti-CitH3 (rabbit, monoclonal; Abcam, ab219407) for 1 hour in antibody diluent (bovine serum albumin [1% w/v], Sigma-Aldrich, A7906) and Triton-X100 (0.5% v/v, Sigma-Aldrich, 270733) in TBS-T. Slides were further washed in TBS-T and incubated with horse radish peroxidase (HRP)-coupled secondary antibody (anti-mouse, DAKO, K4001; anti-rabbit, K4003) for 30 minutes. Following washing in TBS-T, slides were incubated for 10 minutes with Opal690 fluorophore (PerkinElmer, FP1497) in tyramide signal amplification (TSA) buffer (PerkinElmer, FP1498, 1:50 v/v dilution in 1x plus amplification buffer) and subsequently washed. Specimens were incubated in a 1:800 (v/v) dilution of Spectral DAPI for 10 minutes, washed, and then cover-slipped with fluorescence mounting medium.
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6

ELISA Assay for Elastase-DNA Complexes

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We utilized a previously established ELISA assay for the detection of elastase-DNA complexes41 (link) with slight modifications. A rabbit polyclonal anti-neutrophil elastase antibody (1:500; ab131260, Abcam, MA, USA) in 100 mM of bicarbonate/carbonate coating buffer (50 μL in total) was coated onto 96-well microtiter plates (ThermoFisher Scientific, MA, USA) overnight at 4 °C. After blocking in 1% BSA for 1 h, the mixture of 50 μL of human plasma and 50 μL of PBS containing 0.3% BSA, 0.05% Tween 20, and 5 mM EDTA was loaded per well and incubated at room temperature for 1 h. After washing three times with PBS containing 0.05% Tween 20 and 5 mM EDTA (PBST-EDTA), a horseradish peroxidase conjugated anti-DNA antibody (1:100; D5425–3–100, Zymo Research Corporation, CA, USA) in PBST-EDTA (100 μL in total) was added to each well and incubated at room temperature for 1 h. After washing three times with PBST-EDTA, the peroxidase substrate (Glo Substrate Reagent Pack (DY993), Bio-Techne Corporation/R&D Systems, MN, USA) was added. The intensity of chemiluminescence was measured using a plate reader (TECAN Infinite M200Pro, Tecan Group Ltd., Switzerland). For analysis, the luminescence of the blank well was subtracted from the luminescence of each sample.
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7

Immunostaining and Autophagy Analysis of NETs

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LA was embedded in paraffin and used for immunohistochemistry or immunofluorescence (IF) analyses. Masson’s trichrome was used to compare the collagen volume. For IF staining of heart sections, primary antibodies anti-MPO (ab90810 or ab134132, Abcam, UK), neutrophil elastase (NE, ab131260, Abcam, UK) and cit-H3 (ab5103, Abcam) antibodies were used to identify NETs in LA. Cells were fixed with 4% paraformaldehyde for 15 min and NETs were fixed for 30 min to 1 h. Followed by permeabilization with 0.5% Triton-X-100 (BioFroxx, Germany) for 10 min, and sealing with the corresponding serum (Solarbio, China). Besides using primary antibodies to identify NETs, anti-LC3B (2775 S, CST, USA) and anti-p62 (ab56416, Abcam) antibodies were incorporated for the analysis of autophagy. The primary antibodies were incubated overnight at 4 °C, while the secondary antibodies were incubated at room temperature for 1 h in a dark room. DAPI (10 μg/mL) was used to stain nuclei.
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8

CRISPP and NE Co-localization in PMNs

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Example 30

The DUOLINK Protein Proximity Assay (SIGMA) was used to determine whether CRISPP and NE co-localize within PMNs isolated from healthy adults. PMNs were isolated and pre-incubated for 1 hour with F-CRISPP (10 nM) or F-SCR (10 nM) under standard conditions prior to stimulation with LPS (100 ng/mL) on poly-L-lysine coated glass coverslips. The DUOLINK Protein Proximity Assay was performed using a rabbit anti-neutrophil elastase antibody (ab131260, ABCAM) and a mouse anti-FLAG antibody (F1804, SIGMA). Fluorescence detected via confocal microscopy at 546 nm indicated FLAG-tagged peptide and NE co-localization.

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9

Multiparametric Flow Cytometry Analysis of Immune Cell Populations

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Cells were washed with ice-cold phosphate-buffered saline (PBS) and stained with corresponding antibodies in PBS containing 2% fetal bovine serum and 0.02% sodium azide. We used: mouse anti-human CD38 (BD, #563964), mouse anti-human CD34 (BD, #348811), rat anti-human CD49f (BD, #563271), mouse anti-human CD90 (BD, #562685), and mouse anti-human CD45RA (BD, #560673). For intracellular NE protein analysis, cells were subsequently fixed and permeabilized using the Fix&Perm kit (Nordic Mubio, #GAS-002FOC), followed by incubation with a rabbit anti-human NE (abcam, #ab131260) antibody for 15 minutes (min) at room temperature, and subsequent incubation with a goat polyclonal secondary antibody to rabbit IgG-H&L (Alexa Fluor 488) (abcam, #ab150077) for 15 min at room temperature. Cells were fixed with 0.5% paraformaldehyde and measured using a BD LSRFortessa.
Additional methods are available in the Online Supplementary Appendix.
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10

Co-localization of CRISPP and NE in PMNs

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Example 30

The DUOLINK Protein Proximity Assay (SIGMA) was used to determine whether CRISPP and NE co-localize within PMNs isolated from healthy adults. PMNs were isolated and pre-incubated for 1 hour with F-CRISPP (10 nM) or F-SCR (10 nM) under standard conditions prior to stimulation with LPS (100 ng/mL) on poly-L-lysine coated glass coverslips. The DUOLINK Protein Proximity Assay was performed using a rabbit anti-neutrophil elastase antibody (ab131260, ABCAM) and a mouse anti-FLAG antibody (F1804, SIGMA). Fluorescence detected via confocal microscopy at 546 nm indicated FLAG-tagged peptide and NE co-localization.

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