The largest database of trusted experimental protocols

13 protocols using anti p38 mapk

1

Protein Expression Analysis by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot was employed to disclose the expression status of proteins according to a method previously described [33 (link)] (anti- stathmin 1:800; anti- MMP2 1:1000, Abcam Company; anti- p38 MAPK 1:1000, Abcam Company; Phospho-p38 MAPK Antibody 1:1000, BioVision Inc.). We used β-actin as the internal control.
+ Open protocol
+ Expand
2

Immunohistochemical Analysis of Inflammatory Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
The skin of mice in each group was fixed with 4% paraformaldehyde, embedded in paraffin and stained with hematoxylin and eosin (H&E). The protein expression levels of TLR4, NF-κB p65, P38 MAPK, phospho-NF-κB p65 and phospho-p38 MAPK were detected by immunohistochemistry. In this experiment, anti-TLR4 (Abcam, MA, USA), anti-NF-κB p65 (Abcam, MA, USA), anti-p38 MAPK (Abcam, MA, USA), phospho-NF-κB p65 (Abcam, MA, USA) and phospho-p38 MAPK (Abcam, MA, USA) were used in the immunohistochemical staining. The experimental methods refer to Chen’s research.22 (link) Histopathological changes and immunohistochemistry protein expression were observed under microscope. Image-pro Plus 6.0 (Media Cybernetics) was used to analyze the experimental results, and the average optical density was used to represent the protein expression level “Mean density=integrated optical density/area of interest”.
+ Open protocol
+ Expand
3

Diabetic Kidney Disease Biomarker Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Serum creatinine (SCr) (lot#: C011-1-1), blood urea nitrogen (BUN) (#C013-1-1), serum uric acid (SUA) (#C012-1-1), triglyceride (TG) (#A110-1-1), total cholesterol (TC) (#A111-1-1), and urine protein (#C035-2-1) assay kits were from Nanjing Jiancheng Bioengineering Institute (Nanjing, China). Anti-α-smooth muscle actin (αSMA) antibody (#bs-0189R) was purchased from Beijing Biosynthesis Biotechnology Co.,Ltd. (Beijing, China). Anti-Rac1(#ab33186), anti-GTP-Rac1 (#ab33186), anti-p-PAK1 (#ab75599), anti-p38MAPK (#ab195049), anti-p-p38MAPK (#ab47363), anti-β-catenin (#ab32572), anti-Podocin (#ab50339), and anti-nephrin (#ab216341) antibodies were from Abcam (Cambridge, United Kingdom). Anti-β-actin (#66009-1-Ig), anti-fibroblast-specific protein-1 (FSP-1) (#16105-1-AP), anti-PAK1 (#21401-1-AP), anti-snail (#13099-1-AP), HRP goat anti-mouse IgG (#SA00001-1), and HRP goat anti-rabbit IgG (#SA00001-2) antibodies were from Proteintech (Chicago, United States). Trizol (#15596026) was from Thermo Scientific (MA, United States). A Reverse Transcription kit (#CW2569) was purchased from CWBio Co., Ltd. (Beijing, China). STZ (#WXBC8740V) was from Sigma-Aldrich Co. Ltd. (MO, United States). Metformin (#A181224) from Zhejian Yatai Pharmaceutical Co., Ltd. (Shaoxing, China).
+ Open protocol
+ Expand
4

Comprehensive Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein was extracted from the cells and quantified by a Total Protein Extraction Kit (Keygen BioTech, Nanjing, China). Western blotting was performed according to the manufacturer’s protocol. Anti-TPPP, anti-YY1 (#ab109228), anti-E-cadherin (#ab40772), anti-vimentin (#ab92547), anti-MMP3 (#ab52915), anti-MMP7 (#ab205525), anti-VEGF (#ab32152), anti-p38 (#ab170099), anti-MAPK (#ab205926), anti-p38 MAPK (phosphor, Thr180/Tyr182, #4511S), anti-PI3K (#4255S), anti-PI3K (phosphor, Ser249, #13857S), anti-AKT (#2920S), anti-AKT (phosphor, Thr308, #13038S), anti-β-actin (#3700S) and anti-YY1 (#ab12132) antibodies for ChIP were obtained from Abcam (Cambridge, MA) or Cell Signaling Technology (Danvers, MA, USA). β-Actin was used as an endogenous reference. Each blot was independently repeated three times.
+ Open protocol
+ Expand
5

PDGF-BB and AS-IV Effects on VSMCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dulbecco’s modified Eagle’s medium (DMEM)/F12 medium and fetal bovine serum (FBS) were purchased from Invitrogen Life Technologies (Carlsbad, CA, USA). Recombinant human PDGF-BB was purchased from ACROBiosystems, Inc. (Newark, DE, USA) and AS-IV was purchased from Tauto Biotech (Shanghai, China). Dimethyl sulfoxide (DMSO) and MTT were purchased from Sigma-Aldrich (St. Louis, MO, USA). Mouse anti-smoothelin, anti-α-smooth muscle actin (α-SMA), anti-desmin, anti-phospho-p38 mitogen-activated protein kinase (MAPK), anti-p38 MAPK, anti-matrix metalloproteinase (MMP)2, anti-MMP9 and anti-GAPDH antibodies, as well as a goat anti-mouse secondary antibody, were obtained from Abcam (Cambridge, UK).
+ Open protocol
+ Expand
6

Quantification of TGF-β1 and MAPK Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
TGF-b1, drosophila mothers against decapentaplegic protein 3 (Smad3), phosphorylated Smad3, p38 mitogen activated protein kinase (p38 MAPK), and phosphorylated p38 MAPK were quantified by Western blot. Glyceraldehyde phosphate dehydrogenase (GAPDH) was used as a loading control for western blots in this study. Protein concentration was measured with a microplate reader (Thermo Fisher, MA, U.S.A.). Protein samples from heart tissues were separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis and transferred to polyvinylidene difluoride membranes (MILLIPORE). Blots were probed with anti-TGF-b1 (Santa Cruz Biotechnology), anti-Smad3 (Cell Signaling Technology), and anti-p38 MAPK (Abcam), respectively. Horseradish peroxidase-conjugated anti-immunoglobulin G (Southern Biotechnology) was used as a secondary antibody. The bands were detected by use of Gel Image System (Tanon, Shanghai, China).
+ Open protocol
+ Expand
7

Comprehensive Antibody Panel for Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used for western blot (WB) and immunofluorescence (IF): anti-α-Tubulin (WB 1:10000, Abcam ref.: ab7291), anti-β-Actin (WB 1:20000, Sigma-Aldrich ref.: A5441), anti-Phospho p38MAPK (T180/Y182) (WB 1:1000, Cell Signaling ref.: #4511), anti-p38MAPK (WB 1:1000, Abcam ref.: ab170099), anti-Phospho VEGFR2 (Y1175) (WB 1:1000, Cell Signaling ref.: #2478), anti-VEGFR2 (WB 1:1000, Cell Signaling ref.: #3770), anti-Phospho c-Kit (Y719) (WB 1:1000, Cell Signaling ref.: #3391), anti-c-Kit (WB 1:1000, Cell Signaling ref.: #3074 and WB 1:1000, Santa Cruz ref.: sc-13508), anti-DUSP2 (WB 1:1000, IF 1:100, Sigma-Aldrich ref.: SAB4300841), PathScan® RTK Signaling Antibody Array Kit (Chemiluminescent Readout, Cell Signaling ref.: #7982).
+ Open protocol
+ Expand
8

Investigating Signaling Pathway Activation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blotting was performed on cytosolic cellular extracts. Cells were washed with cold phosphate-buffered saline and lysed for 15 min on ice in 0.5 ml of lysis buffer containing protease and phosphatase inhibitors. Cell lysates were clarified by centrifugation (4 °C, 15 min, 12,000 rpm), and protein was subjected to 10% sodium dodecyl sulfate-PAGE (SDS-PAGE) and transferred to a nitrocellulose membrane using a wet transfer system. Membranes were incubated with 5% skim milk dissolved in TBS plus 0.05% Tween 20 (TBST) for 1 h to block nonspecific protein-binding sites. Then, the membranes were incubated with anti-CCRL2 (Abcam, no. ab88632), anti-CX3CR1 (Abcam, no. ab8021), anti-p38 MAPK (Abcam, no. ab197348), anti-ERK (Abcam, no. 196883), anti-AKT (Abcam, no. ab8805), anti-phospho-ERK (Abcam, no. ab50011), anti-phospho-AKT (Abcam, no. ab81283), anti-phospho-p38-MAPK (Abcam, no. ab47363), and anti-GAPDH (Abcam, no. ab181602) antibodies at 4 °C overnight according to the manufacturer’s instructions. The membranes were then washed with TBST and incubated with a secondary anti-rabbit Ab conjugated to HRP (Cell Signaling Technology, no. 7074s) at room temperature. The signals were detected and analyzed by a chemiluminescence imaging system (ChemiScope5600, CLINX, Shanghai, China), and each experiment was performed in triplicate.
+ Open protocol
+ Expand
9

Immunoblotting Analysis of Inflammatory Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
All cell lysates were separated by 10% or 12% SDS-polyacrylamide gel electrophoresis. Then, they were transferred to PVDF membranes. Blocking with 5% skimmed milk powder (BD Pharmingen) for 1 h at room temperature, the membranes were incubated with specific anti-Arg1 (1: 1,000), anti-TNFα (1: 500), anti-IL1β (1: 1,000), anti-TNFSF15 (1: 1,000) from Abcam, anti-p-p38 MAPK (1: 1,000), anti-p38 MAPK (1: 1,000), anti-p-JNK (1: 1,000), anti-JNK (1: 1,000), anti-p-Erk1/2 (1: 2,000), anti-Erk1/2 (1: 2,000), anti-p-Akt (1: 1,000), anti-Akt (1: 1,000), anti-p-STAT1 (1: 1,000), anti-STAT1 (1: 1,000), anti-p-STAT6 (1: 1,000), anti-STAT6 (1: 1,000), anti-p-STAT3 (1: 1,000), anti-STAT3 (1: 1,000), anti-GADPH (1: 2,000) from Cell Signaling Technology, anti-iNOS (1: 1,000, Introvigen) or anti-β-actin (1: 2,000, ZSGB-BIO) overnight at 4°C. Then the membranes were washed and incubated with horseradish peroxidase-conjugated secondary antibodies. Then, protein bands were visualized by ECL Western blot reagent (Bioworld Technology).
+ Open protocol
+ Expand
10

Deguelin-Induced Apoptosis Signaling Pathway

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total protein was extracted from SW620 and RKO cells after deguelin treatment, followed by the determination of protein concentration by Pierce BCA Protein Assay Kit (Thermo Fisher Scientific). Protein samples were subjected to 10–12% SDS-PAGE and transferred to polyvinylidene fluoride (PVDF) membrane (Bio-Rad Laboratories Inc., Hercules, CA, USA). After blocking with 5% nonfat milk for 1 hour at room temperature, the membranes were incubated with appropriate primary antibodies overnight at 4°C. Primary antibodies against total caspase 3, cleaved caspase 3, PARP, cleaved PARP, Bcl-2, survivin, phosphorylated-JNK (Thr183/ Tyr185), phosphorylated-ERK1/2, and phosphorylated-p38 MAPK (Thr180/Tyr182) were purchased from Cell Signaling Technology (CST, Boston, MA, USA) (all dilution 1:1,000). Anti-p38 MAPK and anti-NF-κB p65 (all dilution 1:2,000) were purchased from Abcam (Cambridge, MA, USA). A mouse anti-β-actin monoclonal antibody (dilution 1:1,000; CST) was used as a loading control. Following incubation with secondary antibody conjugated with horseradish peroxidase for 1 hour at room temperature, the immunoreactive bands were visualized using the enhanced chemiluminescence (ECL) detection system (Thermo Fisher Scientific).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!