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26 protocols using dead cell kit

1

Quantifying Apoptosis in PTC Cells

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To quantify the level of apoptosis due to SNG treatment in PTC cell lines, we plated an equal number of cells followed by treatment with varying doses of SNG for about 24 h. Cells were then harvested and washed, and the level of apoptosis was measured on Mouse cell analyzer using Annexin V and dead cell kit (Millipore, USA; cat# MCH100105), as per the manufacturer’s instructions. Further, data collection regarding the number of early and late apoptotic cells was done on Mouse cell analyzer, and total apoptosis was calculated by adding a percent of cells in early and late apoptosis quadrants of the histograms and plotted in bar graphs.
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2

Cell Migration and Invasion Analysis

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Migration and invasion assays were performed using Boyden chambers (Corning, Corning, NY) using 8 μm-size pore membrane coated with matrigel (for invasion assays) or without matrigel (for migration assays). For apoptosis assays, Muse Annexin V and dead cell kit (Millipore, Billerica, MA) were used according to the manufacturer’s instructions. (The details were shown in Supplementary materials and methods)
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3

Neuroprotective Effects of DCBEI

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HT22 cells (3 × 105 cells/mL) were seeded into 6-well plates, pre-treated with DCBEI at doses of 4 mL and 8 mL for 3 h, and then treated with L-Glu (25 mM) for another 24 h.
U251 cells (3 × 105 cells/mL) were seeded into 6-well plates, pre-treated with 4 mL or 8 mL of DCBEI for 3 h, and then treated with Aβ1-42 (10 μM) for another 24 h.
Cells were collected and stained with reagents of the Dead Cell Kit (MCH100105, Millipore, Billerica, MA, USA) and Oxidative Stress Kit (MCH100111, Millipore, Billerica, MA, USA) at 37° C in the dark for 15 min. Fluorescence intensity, as an indicator of apoptosis and ROS activity, was measured using a Muse™ Cell Analyzer (Millipore, Billerica, MA, USA).
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4

Cell Viability and Apoptosis Assays

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Percentage of viable cells was evaluated by trypan blue dye exclusion method. After monolayer cell trypsinization (0.25 mg/ml trypsin, Gibco, Thermo Fisher Scientific), cells were stained with trypan blue (0.04%, Gibco) for 2 min, and vital, unstained cells were counted with emacytometer. The percentage of unstained cells was obtained as mean ± SD of four independent experiments. 786-O cell apoptosis was assayed with MuseAnnexinV and Dead Cell kit (Millipore, Darmstadt, DE); 1 × 105 cells from untreated, DMSO and CPTH2 samples were centrifuged (2000 rpm, 5 min), washed in PBS, and resuspended in PBS plus 1% BSA (Sigma-Aldrich) 1% FBS, with 100 μL of Dead Cell reagent containing AnnexinV and 7-aminoactinomycin D (7-AAD). After 20 min RT incubation at room temperature in the dark, cells were applied to a Muse Cell Analyzer (Millipore), and the results are expressed as percentage of apoptotic cells ± SD.
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5

Detroit 562 HNSCC Cell Culture Protocol

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Detroit 562 human squamous carcinoma cell line originating from pharynx primary location was used in the present study and purchased from the European Collection of Authenticated Cell Cultures (ECACC, Salisbury, UK). Detroit 562 HNSCC cells were seeded on 6-well microplates and were cultured in standard culture medium (EMEM; Eagle's Minimum Essential Medium) containing 10% fetal bovine serum (FBS; Pasching, Austria) and 1% penicillin-streptomycin (PAA Laboratories GmbH, Pasching, Austria) at 37°C in 5% CO2 in air (CO2 incubator, Heraeus Instruments, Hanau, Germany). Additionally, cells were cultured with 100 μg/mL streptomycin, 100 IU/mL penicillin, and 0.25 μL/mL amphotericin B at 37°C in a 5% CO2 atmosphere. Reagents were purchased from PAA Laboratories GmbH (Pasching, Austria); caffeic acid and caffeic acid phenethyl ester were purchased from Sigma (St. Louis, MO, USA). Muse™ Annexin V and Dead Cell kit were purchased from Millipore (Billerica, MA, USA).
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Apoptosis Analysis Using Muse Cell Analyzer

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The distribution of apoptotic cells was analyzed using a MuseTM Annexin V and Dead Cell Kit (Millipore Co., Billerica, MA, USA), based on the manufacturer’s protocol. NHDF cells were harvested following irradiation with 55 mJ/cm2 of UV and subsequent treatment with MEH or MED for 24 h. The harvested NHDF cells were suspended in DMEM, and 100 μL of this cell suspension (1 × 104 cells/mL) was incubated with MuseTM Annexin V and a Dead Cell Kit (Millipore Co., Billerica, MA, USA) reaction reagent for 20 min at room temperature. Finally, cells were analyzed using a MuseTM Cell Analyzer (Millipore Co., Billerica, MA, USA). After gating based on size, cells were distinguished into four different groups: non-apoptotic cells [Annexin V (-) and 7-AAD (−)], early apoptotic cells [Annexin V (+) and 7-AAD (−)], late apoptotic cells [Annexin V (+) and 7-AAD (+)], and mostly nuclear debris [Annexin V (+) and 7-AAD (+)]. These data are represented as the number of live and apoptotic cells.
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7

Apoptosis Quantification in A549 and H460 Cells

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The extent of apoptosis was determined by Muse Annexin V and a dead cell kit (Millipore, Billerica, MA, USA). According to the manufacturer’s procedure, A549 and H460 cells (10 × 104 cells/well) were seeded in 6-well plates and treated with CTT (0, 5, or 10 μM) or GF 20 μM for 24 h. After being harvested from the culture medium, cells were washed with 1 mL PBS and 100 μL of Muse™ Annexin V Dead Cell reagent were added to them. Next, cells were incubated at room temperature for 20 min without light. The apoptosis was then analyzed with Muse cell analyzer and Muse analysis software (EMD Millipore).
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8

Annexin V Apoptosis Assay

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We performed the annexin V assay for the measurement of apoptosis using Muse Annexin V and Dead Cell Kit (Millipore, Billerica, MA, USA), according to the manufacturer’s instructions. We analyzed the relative percentage of total apoptotic cells using a Muse Cell Analyzer (Millipore, Billerica, MA, USA).
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9

HepG2 Cell Apoptosis via Blueberry Leaves

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Human hepatocellular cancer cell line (HepG2) was purchased from American Type Culture Col-lection (ATCC; Rockville, MD, USA). Blueberry leaves were bought from Nanjing Jinrui Blueberry Professional Cooperative. Dulbecco’s modified Eagle’s medium (DMEM), 0.25% trypsin-ethylene diamine tetraacetic acid (EDTA) solution, fetal bovine serum (FBS), and penicillin-streptomycin solution were acquired from GIBCO (Grand Island, NY, USA). 3-[(4,5)-Dimethylthiazol-2-yl]-2,5-diphenyl tetra-zolium bromide (MTT), bovine serum albumin (BSA), phosphate buffer saline (PBS), sodium palmitate and Oil Red O and were purchased from Sigma Aldrich Chemical Co. (St. Louis, MO, USA). Deionized water was obtained from a Milli-Q Gradient Water System (Millipore Corp., Bedford, MA, USA). In addition, The Muse TM Annexin V and Dead Cell Kit was bought from Merck Limited (Darmstadt, Germany). Bradford reagent was obtained from Bio-Rad Laboratory (Hercules, CA, USA). RIPA lysis buffer, antibodies against caspase-3 and Bcl-2 were bought from Cell Signaling Technology Inc. (Boston, MA, USA), β-actin and secondary antibody were provided by Abcam Inc. (Cambridge, UK).
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10

Apoptotic Cell Analysis Using Annexin V and 7-AAD

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Apoptotic cells were analyzed using Muse Annexin V and Dead Cell Kit (Merck Millipore) according to the previously described protocol (11). This assay utilizes Annexin V to detect phosphatidylserine on the external membrane leaflet of apoptotic cells and dead cell marker, 7-AAD, as an indicator of cell membrane integrity. Briefly, 1 × 105 cells were resuspended in culture medium containing 1% FBS and incubated with Muse Annexin V and Dead Cell Reagent for 20 min at room temperature in the dark. Cells were quantified using Muse Cell Analyzer and Muse analysis software.
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