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38 protocols using supersignal west pico chemiluminescent kit

1

Skeletal Muscle Protein Analysis

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Samples from skeletal muscle (25 µg), run on an SDS-PAGE gel, were transferred to a nitrocellulose membrane (Millipore, Bedford, MA, USA) through semi-dry transference, and protein content confirmed using Ponceau S staining. After three cycles of TTBS (Tris 100 mM pH 7.5; 0.9% NaCl, and 0.1% Tween-20) washing, membranes were blocked with 5% non-fat dry milk for 1 h at room temperature. After washing, membranes were incubated with primary antibodies for SOD1, SOD2, CAT, IL-1β, IL-10, TNF-α, heat-shock protein 70 (HSP70), and β-actin for 2 h at room temperature in a 1:1000 dilution range. Secondary antibodies (anti-rabbit/mouse/goat peroxidase-linked—Cell Signaling Technology, Beverly, MA, USA) were incubated for 1 h at room temperature in a 1:2000 dilution range. Detection of immunoreactivity was performed through chemiluminescence using a Supersignal West Pico Chemiluminescent kit (Thermo Scientific, Rockford, IL, USA). Densitometry analysis was conducted with ImageJ software (version 1.50i, National Institutes of Health, Bethesda, MD, USA), and the results were expressed as ratio of protein:β-actin.
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2

Western Blot Analysis of RANKL and ERK in RA Synovial Fibroblasts

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Cells were treated with IL-6/sIL-6R for 0, 1, 6, 12, 24, and 48 hours. For another experiment, RASFs were cultured with IL-6/sIL-6R plus T-614 or MTX for 72 hours, using 25 μM PD98059 (CST, USA) before IL-6/sIL-6R was added as control. Proteins were extracted in lysis buffer (30 mM Tris [pH 7.5], 150 mM sodium chloride, 1 mM PMSF, 1 mM sodium orthovanadate, 1% nonidet P-40, 10% glycerol, and phosphatase and protease inhibitors). The proteins were then separated by SDS-PAGE and electrophoretically transferred onto polyvinylidene fluoride membranes. The membranes were probed with RANKL (EPR4999, Abcam, Cambridge, MA, USA), p-ERK1/2 (D13.14.4E, Cell Signaling, MA, USA), ERK1/2 (137F5, Cell Signaling, MA, USA) or GAPDH (D16H11, Cell Signaling, MA, USA), or β-actin (13E5, Cell Signaling, MA, USA) overnight at 4°C and then incubated with an HRP-coupled secondary Ab (Cell Signaling, MA, USA). Proteins were detected with the SuperSignal West Pico Chemiluminescent Kit (Thermo Scientific, Rockford, IL, USA). Densitometry values were analyzed and quantified with ImageLab (Bio-Rad).
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3

Western Blot Analysis of Cell Signaling

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The cells (1 × 106 treated for 6 h) post treatments were washed with HBSS followed by homogenization in 2 mL of RIPA buffer/10% of Protease Inhibitor (Sigma-Aldrich, AUS). After subjecting to centrifugation at 12,000 rpm for 20 min at 4 °C, the supernatant was collected. Thirty micrograms of protein from each sample was denatured in Laemmli loading buffer (Bio-Rad Laboratories, AUS) and separated on precast 12% SDS-PAGE gels (Bio-Rad Laboratories, AUS), which was followed by overnight transfer onto Polyvinylidene difluoride (PVDF) membranes (Millipore, NSW, AUS) at 30 mV at 4 °C. By using 5% non-fat milk, the blot was blocked before incubating with respective antibodies: anti-GADPH, Survivin, Grp78 (#14C10, 1:3000, Novus Biologicals, AUS), poly(ADP-ribose)polymerase (PARP), and cleaved PARP (SIGMA, VIC, AUS) overnight at 4 °C in blocking buffer. The blot was washed in PBST and incubated with appropriate species monoclonal horseradish peroxidase-conjugated anti-IgG secondary antibodies (1:5000) for 1 h at 20 °C. The bands were visualized by using the Supersignal West Pico chemi-luminescent kit (Thermo Scientific, VIC, AUS). It was digitized and the band intensities were determined by using a Fuji LAS-3000 Imager (Fuji Life Sciences, JPN). The samples from all groups were included in each individual blot to ensure accurate quantification across multiple blots.
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4

Protein Extraction and Western Blot Analysis

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Total cellular proteins were extracted using 1× cell lysis buffer (Cell Signaling Technology). Membrane proteins were isolated using a membrane protein extraction kit (Thermo Fisher Scientific, Waltham, MA, USA). Protein concentrations were determined using the Bradford protein assay according to the manufacturer’s instructions (Bio-Rad, Hercules, CA, USA). Proteins were separated by 4–12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred to nitrocellulose membranes. The membranes were blocked with 5% skim milk blocking buffer for 1 h, followed by overnight incubation at 4 °C with primary antibodies in blocking buffer. The membranes were washed in washing buffer three times, followed by incubation with secondary antibodies for 1 h. After successive washes, the membranes were developed using a SuperSignal West Pico Chemiluminescent kit (Thermo Fisher Scientific).
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5

Evaluating SPIO NPs and ASOs in Neuroblastoma

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SK-N-DZ, SK-N-BE, DMEM and EMEM were purchased from ATCC (Manassas, VA, USA). 1% Minimum Essential Medium Non-Essential Amino Acids Solution, Ham’s F-12 Nutrient Mix, A532, azide, Slide-A-Lyzer MINI Dialysis Units, Nanodrop 2000, Opti-MEM, Ab-Alexa488, DAPI, NuPAGE Sample Reducing agent and SuperSignal™ West Pico Chemiluminescent kit were all purchased from Thermo Fisher Scientific (Waltham, MA, USA). SPIO NPs were purchased from Ocean Nanotech (San Diego, CA, USA). ASOs were synthesized and provided by Ionis Pharmaceuticals (Carlsbad, CA, USA). 5’-DBCO-TEG phosphoramidite, Zetasizer Nano ZS, FC500 and Centro LB 960 Microplate Luminometer were from Glen Research (Sterling, VA, USA), Malvern (UK), Beckman Coulter (Brea, CA, USA) and Berthold Technologies (Oakridge, TN, USA), respectively. Anti-MXD3 monoclonal mouse Ab, rabbit anti-histone Ab, AV conjugated to FITC, PI and Caspase 3/7 Glo kit were purchased from Neuromab (Davis, CA, USA), Abcam (Cambridge, UK), BD Biosciences (San Jose, CA, USA), Roche (Nutley, NJ, USA) and Promega (Madison, WI, USA), respectively. Image J was from NIH (Bethesda, MD, USA).
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6

Protein Expression Analysis Protocol

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Equal amounts of protein were resolved by 4–12% SDS-PAGE (Invitrogen) and transferred to nitrocellulose membranes (GE Healthcare Bio-sciences, UK). The membranes were blocked with 5% skim milk-blocking buffer for 1 h before incubation overnight at 4°C with primary antibodies. The membranes were then washed three times and incubated with horseradish peroxidase-conjugated secondary antibodies in blocking buffer for 1 h. After successive washes, the membranes were developed using SuperSignal West Pico Chemiluminescent kit (Thermo Fisher Scientific, USA).
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7

Protein Extraction and Western Blot

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For protein extraction, cells were lysed by RIPA buffer (Thermo) with a cocktail of protease and phosphatase. Protein lysates were separated on SDS-polyacrylamide gels and then transferred to PVDF membranes (Bio-Rad). Membranes were blocked in TBST buffer containing 5% bovine serum albumin (BSA) for 1 h at room temperature (RT) and probed with primary antibodies (supplementary materials) overnight. The membrane was then incubated in horseradish peroxidase-linked secondary antibodies (cell signaling) diluted 1:5000 in 5% BSA. Blots were developed using a Supersignal West pico chemiluminescent kit (Thermo).
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8

Detect HIV-1 Proteins in Immune Cells

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Whole-cell lysates derived from gp120 (250 ng/ml)- or HIV-1-pulsed qCD4s or rCD4s purified from HIV-1-seropositive or healthy individuals were subjected to SDS-PAGE and were transferred to polyvinylidene difluoride membranes and blotted with antibodies against gp120 (Life Technologies), p24 (Life Technologies), or human-IgG (Dako) after blocking with TBST/5% milk. Proteins were visualized using the SuperSignal West Pico Chemiluminescent Kit (Thermo Fisher Scientific, Waltham, MA) and Biomax-MR film (Kodak, Rochester, NY). IgG purification and flow cytometry-based HIV-1 RNA in situ hybridization were performed using the Melon-Gel IgG Spin Purification kit (Thermo Fisher Scientific) and ViroTect (Invirion, Oak Brook IL), respectively.
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9

Western Blot Analysis of Phosphoproteins

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2-DE gels were electrotransferred onto Hybond ECL nitrocellulose membranes (GE Healthcare, UK). Membranes were blocked with 3% bovine serum albumin (BSA) in TBS containing 1% Tween-20 (TBS-T) at room temperature for 2 h before being probed with rabbit anti-phosphoserine specific polyclonal antibody (61–8100, Invitrogen Life Technologies, CA, USA, diluted 1:1000) or mouse anti-phosphothreonine specific monoclonal antibody (13–9200, Invitrogen, diluted 1:1000), incubating overnight at 4 °C. Goat anti-mouse IgG antibody (H + L) HRP (AP308P, Millipore, Temecula, CA, USA; diluted 1:80,000) and a goat anti-rabbit IgG–HRP (65–6120, Invitrogen; diluted 1:50,000) conjugates were used to localize antibody–antigen complexes. Mouse anti-phosphotyrosine-HRP monoclonal antibody (03–7720, Invitrogen; diluted 1:3000) also was used. Signal detection was performed using the Supersignal West Pico Chemiluminescent Kit (Thermo Scientific, Rockford, USA) in a luminescent image analyzer ImageQuant LAS 4000 system (GE Healthcare).
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10

Immunoblot Analysis of GFP Expression

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For immunoblot analysis, seedlings or roots of 7 days-old plants were homogenized in SDS loading buffer (250 mm Tris-HCl, 10% SDS, 25% glycerol, 0.1% bromophenol blue, 10%β-mercaptoethanol; [30 (link)]) using 50 μL of buffer for 10 mg of tissue. Then samples were heated at 75°C for 15 min and supernatants collected by centrifugation. A 10 μL aliquot was analyzed by SDS-PAGE [31 (link)] and immunoblotting [32 (link)]. Immunoblots were probed with a 1:5000 dilution of the anti-GFP antibody (Abcam Ab290), followed by incubation in a 1:10000 dilution of a horseradish peroxidase-conjugated goat anti rabbit antibody (KPL 074–1506). Equal loading was confirmed by stripping and re-probing the immunoblots in a 1:10000 dilution of anti-PEPC (Abcam ab34793). The secondary antibody was visualized by SuperSignal West Pico Chemiluminescent Kit (Thermo Scientific, Rockford, IL, USA) and exposed on CL-XPosure Film (Thermo Scientific, Rockford, IL, USA).
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