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39 protocols using bca kit

1

Western Blot Analysis of Apoptosis Signaling

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Cells were harvested, washed and suspended in RIPA lysis buffer (Wuhan Servicebio Technology Co. Ltd.). Following 6000g centrifugation for 10 min at 4 °C, the supernatant was collected. The total protein in each sample was quantified using a bicinchoninic acid (BCA) kit (Wuhan Servicebio Technology Co. Ltd.). Equal amounts of proteins (10 µg/lane) were electrophoretically separated via 12% SDS-PAGE and transferred to a PVDF membrane (EMD Millipore). The membrane was blocked for 1 h in 5% skimmed milk dissolved in 0.1% of Tween-20 used for TBST at 4 °C and then incubated with antibodies directed against, human caspase 3 (1:1000), c-caspase 3 (1:1000), IκB (1:1000), p-IκB (1:1000), NF-κB p65 (1:1000), BCL2 (1:1000), BCL-XL (1:1000), BAX (1:1000), AIP (1:1000), p53 (1:1000), and β-actin (1:1000) at 4 °C overnight, followed by incubation with goat anti-rabbit IgG H&L (HRP) (1:1000; A0216, Beyotime Institute of Biotechnology) or goat anti-rat IgG H&L (HRP) (1:1,000; A0208, Beyotime Institute of Biotechnology) at room temperature for 1 h. The protein signals were detected using Super electrochemiluminescence (ECL) Detection Reagent (Yeasen Biotechnology Co. Ltd) by 5.2 Image Lab software (Bio-Rad Laboratories, Inc.). The bands on the membrane were quantified by normalization to β-actin.
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2

Protein Quantification and Western Blot

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After extraction of proteins from tissue samples and processed cell samples, the protein concentration was measured using the BCA kit (Wuhan Servicebio Technology Co. Ltd). Loading buffer (Wuhan Servicebio Technology Co. Ltd) was added, boiled at 100 °C for 10 min, and stored at –80 °C. The proteins were separated using 8%–12% SDS gel electrophoresis and transferred to a 0.22 μm polyvinylidene fluoride (PVDF) membrane. The strip was blocked with 5% skimmed milk or 5% BSA at room temperature for 2 h, diluted at 4 °C for 12 h per the instructions of the primary antibody, incubated with the second antibody at room temperature for 2 h, and then exposed.
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3

Vulvar Tissue Protein Analysis

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The vulvar tissues were homogenized in RIPA lysis buffer with protease inhibitors. The concentration of total protein was determined using the BCA kit (Servicebio, Wuhan, China). The equal amounts of denatured proteins were separated by 10% SDS-PAGE and transferred to a polyvinylidene fluoride membrane (Merck Millipore, Billerica, MA). The membrane was sealed in skim milk and then incubated with primary antibodies against NLR family pyrin domain containing 3 (NLRP3), interferon gamma inducible protein 16 (IFI16), caspase-1 (ABclonal, Wuhan, China), ASC (Santa Cruz Biotechnology, Dallas, TX), gasdermin D (GSDMD)(CST, Danvers, MA) and secondary antibody (LI-COR, Lincoln, NE). Images of the membrane were acquired using the Odyssey infra-red imaging system (LI-COR, Lincoln, NE).
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4

Protein Extraction and Western Blot Analysis

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RIPA lysate buffer (Servicebio, Wuhan, China) was used to separate protein from gastric tissue, and the protein concentration was measured by a BCA kit (Servicebio, Wuhan, China). Prepared protein samples were separated by gel electrophoresis and transferred to solid phase carrier (PVDF) membranes, which were incubated with special antibodies and washed with TBST. After that, the membranes were soaked in ECL chemiluminescence solution to detect the target protein blots which were visualized by ImageQuant LAS4000mini system (GE, Boston, MA, USA). During the whole process, β-actin was treated as a control protein [22 (link),23 (link)].
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5

Membrane Protein Isolation and Quantification

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Minute™ Plasma Membrane Protein Isolation and Cell Fractionation Kit (Invent Biotechnologies, USA) was used to isolate and extract cytomembrane and cytoplasmic proteins according to the manufacturer’s instruction. The hippocampal tissue was added with 200 μL buffer A and grinded with a grinding rod for about 1 min before adding 300 μL of buffer A. After incubation on ice for 5 min, gradient centrifugation was performed. The extracted protein of cells or tissues was determined for concentration with a BCA kit (Servicebio). Equal amounts of protein were electrophoresed on 10% polyacrylamide gels and then transferred onto a polyvinylidene fluoride (PVDF) membrane. After blocking with 5% skim milk for 1 h, the membranes were incubated overnight at 4 °C with primary antibodies directed against clathrin, RAB5B, NMDAR1, and β-actin (Additional file 4: Table S1). The membranes were incubated with secondary antibodies at room temperature for 1 h and visualized using an ECL substrate (WBKLS0100, Millipore). FlourChem software (Alpha Innotech, FlourChem) was used to analyze the ratio of the gray value of each band to the β-actin band for relative expression levels. All samples were analyzed independently and in triplicate.
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6

Western Blot Analysis of Dendritic Cell Activation

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Total protein was extracted from imDCs, mDCs and Met-mDCs using RIPA buffer containing protease (phenylmethylsulfonylfluoride (PMSF)) and phosphatase inhibitors (Solarbio, Beijing, China). The protein concentration was determined by a BCA kit (Servicebio, Beijing, China). Equal amounts of denatured protein samples were separated on a 10% sodium dodecyl sulfate‒polyacrylamide gel electrophoresis (SDS‒PAGE) gel and transferred onto 0.45 μm PVDF membranes (Merck Millipore Ltd., Tullagreen, Carrigtwohill Co. Cork, Ireland). After being blocked with 5% nonfat milk, the membranes were incubated with primary antibodies against GAPDH, pFoxO3a (s253) and Foxo3a overnight at 4 °C and then with HRP-conjugated secondary antibodies for 1 h at room temperature. The signals were visualized using an enhanced chemiluminescence detection kit (Meilunbio, Dalian, China) in an imaging system (Bio-Rad, Hercules, CA, USA). The mean gray value of each band was analyzed by ImageJ software.
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7

Quantitative Analysis of Oxidative Stress

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The cartilage tissues and chondrocytes were lysed using Cell lysis buffer (Solarbio, China) and detected with BCA kit (Servicebio, China). The MDA and GSH concentration were detected using MDA Assay Kit (Beyotime, China) or GSH/GSSG Assay Kit (Beyotime, China) and normalized based on the protein concentration. The Fe2+ detection was performed using Iron Assay Kit (Dojindo, Japan) according to the kit’s instructions.
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8

Colonic Protein Expression Analysis

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The proximal colon tissue of the SD rats was pulverized, and total protein was extracted from the colon tissue using RIRA lysis buffer (No. G2002, Servicebio). The protein concentration was determined using a BCA kit (No. G2026, Servicebio), and the total protein suspension was run on 10% SDS-PAGE gels (No. G2037, Servicebio) and subsequently transferred to a PVDF membrane. The PVDF membrane was incubated with primary antibodies against tryptophan hydroxylase-1 (TPH1) (1:1000, No. 12339S, CST), 5-HT4 receptor (5-HT4R) (1:1000, No. A2802, ABclonal) and GAPDH antibody (1:2000, No. GB15004, Servicebio) overnight at 4°C, incubated with the secondary antibodies (1:1000, No. GB23303, Servicebio) at room temperature for 1 h, washed with TBST, and developed with an ECL luminescent solution. ImageJ software was used to analyze the gray values of the protein bands, using GAPDH as an internal reference (Zhan et al., 2022 (link)).
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9

Western Blot Analysis of Protein Expression

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Cells were collected and lysed using the RIPA regent (Servicebio). The protein concentration in each sample was detected using the BCA kit (Servicebio). Protein samples were separated using 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis under 90 V voltage, and proteins were transferred onto a PVDF membrane (Millipore, USA). After blocking the membranes with tris-buffered saline and Tween 20 containing 5% skim milk at atmospheric temperature for 2 h, the membranes were incubated with primary antibodies (eg, AKT1, mTOR, HIF1α, Glut1, VEGF, and β-actin) (Proteintech, Wuhan, China) at 1:1,000 dilution for 16 h at 4°C. After washing with tris-buffered saline and Tween 20 to remove free antibodies, the membranes were incubated with the secondary antibodies at 1:3,000 dilution for 2 h at room temperature. Finally, the signals were detected using the Photoshop Image Analysis software CS3 (Adobe Systems, USA).
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10

Protein Extraction and Immunoblotting Protocol

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RIPA buffer (Promoter, Wuhan, China) with PMSF and protease inhibitor cocktail (MCE, USA) were used for dissociating the protein. BCA kit (Servicebio, Wuhan, China) was used to measure protein concentration in the supernatant after removing the precipitate. Electrophoresis was used to transfer the protein samples onto PVDF membranes after boiling the protein. At 4°C overnight, the membranes were incubated with primary antibodies. The membranes were washed three times with TBST and then incubated with secondary antibodies for one hour. The antibodies used in this study were as follows: anti-ADA (Proteintech, 17479-1-AP), anti-GAPDH (Proteintech, 60004-1-Ig).
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