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Whole blood genome extraction kit

Manufactured by Tiangen Biotech
Sourced in China

The Whole Blood Genome Extraction Kit is a laboratory tool designed to efficiently extract and purify genomic DNA from whole blood samples. It employs a streamlined process to isolate high-quality DNA suitable for various downstream applications, such as genetic analysis and sequencing.

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6 protocols using whole blood genome extraction kit

1

Genetic Variation in 5-HTR2A

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Venous blood samples were obtained as part of the health examination and were anonymized. Samples were collected in EDTA-containing tubes from each participant following a 12-h fast. Genomic DNA was purified from the samples using a whole blood genome extraction kit (Tiangen Biotech, Beijing, China) and stored at −20 °C until use. Tag single nucleotide polymorphisms (SNPs) of 5-HTR2A in the Chinese Han population were identified in the Haplotype Map database (National Center for Biotechnology Information, Bethesda, MD, USA). The SNPs rs6313, rs1923884, and rs2070040 were genotyped with the SNaPshot SNP assay. Data were analyzed using GeneMapper 4.1 (Applied Biosystems, Foster City, CA, USA).
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2

Plasma and Genomic DNA Extraction

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A total of 5 mL of fasting peripheral venous blood was drawn from the subjects into ethylenediaminetetraacetic acid (EDTA)-containing blood collection tubes, and centrifuged at 5000 rpm for 5 min at 4 °C. Plasma and blood cells were separated and stored in a − 80 °C refrigerator until further use. Plasma was subjected to biochemical indicator testing and blood cells were subjected to genomic DNA extraction using a whole blood genome extraction kit (Tiangen Biotech, China).
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3

Genotyping of Circadian SNPs

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Venous blood samples were collected in EDTA-containing tubes from all participants following a 12 h fast. Genomic DNA was purified from the samples using a whole blood genome extraction kit (Tiangen Biotech, Beijing, China) and cryopreserved at −20°C until use. The SNPs rs1801260 and rs6850524 were genotyped with the SNaPshot SNP assay using the primers listed in Table 1. Data were analyzed using GeneMapper 4.1 (Applied Biosystems, Foster City, CA, USA). For quality control, 10% of randomly selected samples were genotyped a second time by different researchers, yielding 100% reproducibility.
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4

MALAT1 Gene Polymorphism Analysis

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We utilized a commercial whole blood genome extraction kit to extract DNA from peripheral blood leukocytes according to the manufacturer’s instructions (Tiangen Biotech, China). We used SNPscan™ typing assays to detect polymorphisms of the MALAT1 gene. The probes for the identification of primer sequences were 5′-TGCATTTACTTGCCAACAGAACAGAAAG-3′ and 5′-TGCATTTACTTGCCAACAGAACAGAGAA-3′. The universal primer was 5′-ACCTGAAGTCAAGACAACTGCATTC-3′.
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5

Genotyping MAOA SNPs in Chinese Han

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Venous blood samples were collected in EDTA-containing tubes from all participants following a 12-h fast. Genomic DNA was purified from the samples using a whole blood genome extraction kit (Tiangen Biotech, Beijing, China) and cryopreserved at −20 °C until use. Tag single nucleotide polymorphisms (SNPs of MAOA were derived from a Chinese Han population in the Haplotype Map database (National Center for Biotechnology Information). SNPs rs6323 and rs1137070 were genotyped with the SNaPshot SNP assay using the primers listed in Table 1. Data were analyzed using GeneMapper 4.1 (Applied Biosystems, Foster City, CA, USA). For quality control, 5% of randomly selected samples were genotyped a second time by different researchers, yielding 100% reproducibility.
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6

Genotyping of 5-HT2A Receptor Polymorphisms

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Blood samples were collected into ethylene diamine tetraacetic acid tubes during the physicians’ physical examination. Genomic DNA (gDNA) was extracted using the Whole Blood Genome Extraction kit (Tiangen Biotech, Beijing, China) before cryopreservation at −20 °C until further use. The T102C and -1438G/A polymorphisms were genotyped using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). gDNA (100 ng) was used in each reaction mixture, with the final volume of each reaction mixture totaling 20 μL. gDNA was then amplified using the PCR instrument (MyCycler, Bio-Rad, Hercules, CA, USA). Ten μL of PCR product was then used in each enzyme-digested mixture, with the final volume of each enzyme-digested mixture totaling 30 μL. The fragments were resolved with electrophoresis on 2% agarose gels and visualized with UV light. The primers used and genotype information for T102C and -1438G/A are listed in Table 1 and Table 2.
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