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Bovine cytochrome c

Manufactured by Merck Group
Sourced in United Kingdom

Bovine cytochrome c is a laboratory reagent used in various biochemical and biophysical experiments. It is a heme-containing protein found in the mitochondria of bovine (cattle) cells, which plays a crucial role in the electron transport chain during cellular respiration. Bovine cytochrome c is commonly used as a model system for studying protein structure, function, and interactions.

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4 protocols using bovine cytochrome c

1

Protein Sample Preparation and Characterization

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Methanol (> 99.9% purity) was purchased from Sigma-Aldrich (UK). Ammonium acetate was supplied by Fisher Scientific (Loughborough, UK). Ultrapure water was obtained from a Milli-Q Advantage A10 ultrapure water filtration system (Merck Millipore, Darmstadt, Germany).
Bovine ubiquitin, equine myoglobin and bovine cytochrome c were purchased from Sigma-Aldrich (UK) as lyophilized powders with purities of ≥ 98, 90 and 95% respectively. Proteins were dissolved in 200 mM Ammonium acetate. Myoglobin in Ammonium acetate was desalted twice using Micro Bio-Spin 6 chromatography columns (Bio-Rad Laboratories, Hercules, CA, US).
All samples were diluted to a final protein concentration of 10 μM.
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2

Protein Standards for Mass Spectrometry

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Pooled normal human serum samples were obtained from Innovative Research (Novi, MI). Protein standards, including bovine serum albumin (BSA, pI 4.7), human serum albumin (HSA, pI 4.7), chicken egg lysozyme (LZ, pI 11), bovine cytochrome c (CC, pI 9.6), β-lactoglobulin (BLG, pI 5.1), bovine carbonic anhydrase (BCA, pI 6.2), human transferrin (TF, pI 6.8), as well as the peptide biomarker bradykinin (RPPGFSPFR, pI 12), were purchased from Sigma-Aldrich (St. Louis, MO). Sequencing-grade trypsin was acquired from Promega (Madison, WI).
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3

Heterologous Expression and Characterization of CPR Enzymes

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ATR2, ATR2Ncut, PsCPR and RnCPR were expressed in BL21 (AN1067, AN1068, AN1069 and AN1070, respectively). Overnight cultures of these strains were inoculated into 50 ml of TB medium (per litre: 12 g tryptone (Difco), 24 g yeast extract (Diffco), 9.4 g K2HPO4, 2.2 g KH2PO4 and 4 ml glycerol) supplemented with 50 mg l−1 ampicillin in a baffled shake flask at 25 °C. IPTG (1 mM) was added for induction at 12 h post inoculation. Following further incubation for 12 h, cells were harvested by centrifugation and suspended in 100 mM sodium phosphate buffer (pH 7.3) containing 10% glycerol. The crude extract containing a CPR was obtained by centrifugation following sonication. The protein concentration was measured using a BCA Protein Assay Kit (Pierce). Verification of CPR activity was carried out by a method of P450 reductase activity assay22 (link). The reaction mixture contained 2.1 μg of total protein, 100 μg of bovine cytochrome c (Sigma), 100 μM NADPH and 100 mM potassium phosphate (pH 7.3). The samples were incubated at 25 °C for 5 or 10 min. Degradation ratio of NADPH was measured at 550 nm by comparing before with after incubation.
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4

Characterizing SPT16 Interactions with Chromatin

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Recombinant SPT16 proteins fused to glutathione S transferase (GST) were mixed with equimolar amounts of recombinant Arabidopsis H2A–H2B or with bovine cytochrome c (Sigma Aldrich) in GST buffer (0.2–0.35 M NaCl, 25 mM HEPES pH 7.6, 0.05% (v/v) NP40, 5 mM DTT, 10% (v/v) glycerol, 2 mM MgCl2). For some assays GST-AD/WT was phosphorylated in vitro by CK2α (as described below) prior to the binding reaction. Following incubation (30 min at 30°C) glutathione sepharose beads were added and the samples were incubated for 3 h on a rotating wheel at 4°C. Beads were washed three times in GST buffer before bound proteins were eluted by boiling in protein loading buffer and analysed by SDS-PAGE.
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