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12 protocols using fetal bovine serum (fbs)

1

Cytotoxicity Evaluation of Caryophyllene and Cigarette Smoke

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All of the chemicals, if not otherwise specified, were purchased from Merck Life Science S.r.l. (Milan, Italy); particularly, the β-caryophyllene was >98.0% purity. The sample of cigarette smoke condensate (CSC; batch n. R140701; 40 mg/mL of smoke particulates in DMSO), produced by smoking the University of Kentucky’s 3R4F reference cigarettes on a FTC Smoke Machine, was provided by Murty Pharmaceuticals Inc. (Lexington, KY, USA). Dulbecco’s Modified Eagle’s medium (DMEM), buffer, fetal bovine serum, and cofactors were from Aurogene S.r.l. (Rome, Italy). All of the solutions were prepared in the better solvent, sterilized by filtration and stored for a just conservation time at recommended temperature. The sesquiterpene β-caryophyllene was dissolved in ethanol (EtOH 100% v/v) while the CSC sample was dissolved in dimethyl sulfoxide (DMSO 100% v/v). The solvents were used at a maximum 1% v/v nontoxic concentration in the medium.
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2

Comprehensive Antioxidant Characterization Protocol

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All the chemicals, including Folin-Ciocalteu’s phenol reagent, polyvinylpyrrolidone (PVP), sodium carbonate, tannic acid (98% purity), aluminum chloride hexahydrate (AlCl3·6H2O; Ph Eur purity), quercetin (98% purity), 1,1-diphenyl-2-picrylhydrazyl radical (DPPH; 95% purity), 2,2-azobis (2-methylpropionamidine) dihydrochloride (AAPH; 97% purity), 2,2-azino-bis (3-thylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS; 98% purity), trolox (97% purity), ferrozine (97% purity), iron (II) sulfate heptahydrate (FeSO4·7H2O; 99% purity), iron (III) chloride (FeCl3·6H2O; 97% purity), hydroxylamine hydrochloride (98% purity), rutin (99% purity), bovine serum albumin, glucose, fructose, sodium azide, iron (II) chloride (FeCl2·4H2O; 99% purity), tert-butyl hydroperoxide (tBOOH; 80% purity), and methanol were purchased from Merck (Darmstadt, Germany). RPMI 1640 medium and fetal bovine serum were provided by Aurogene (Rome, Italy).
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3

THP-1 Cell Differentiation and Inflammasome Activation

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Human myelomonocytic THP-1 cells were cultured in RPMI 1640 medium (Aurogene, Rome, Italy) supplemented with fetal bovine serum (10%; Aurogene), L-glutamine (2 mM; Aurogene), penicillin (100 IU/mL; Aurogene) and streptomycin (100 mg/mL; Aurogene). Cell culture medium was replaced every 2−3 days, and the cultures were maintained at 37 °C and 5% CO2 in a fully humidified incubator. The day before each experiment, cells were plated in 48-well culture plates (90.000 cells/well) and were differentiated by treatment with PMA (50 nM, 24 h; Sigma-Aldrich). PMA-differentiated THP-1 cells were washed twice with phosphate-buffered saline (PBS) and primed with LPS (10 μg/mL, 4 h; Sigma-Aldrich) in serum-free medium. Cells were then incubated with compounds dissolved in medium containing 0.1% DMSO for 1 h and cell death was triggered with ATP (5 mM, 90 min; Sigma-Aldrich). MCC950 (Sigma-Aldrich batch #45216 and batch #85021 and from Crysdot (product n. CD31002496; OS05876-18070932) was used in the experiments.
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4

Transfection and Stable Cell Line Generation

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A172, LN229, U87MG, LN18 and T98G cell lines (ATCC, Rockville, MD, USA) were cultured in Dulbecco’s modified Eagle’s medium supplemented with 10% fetal bovine serum (Aurogene) in a humidified atmosphere containing 5% CO2 at 37° C. Transfections were performed by Lipofectamine 3000 reagent (Invitrogen) using plasmid DNA or DsiRNA H19 (HSC.RNAI.NR_002196.12, which consists of 3 predesigned DsiRNAs for the same target, H19, a negative control, NC1, and positive controls for transfection, TYE, all from Integrated DNA Technologies, IDT) in Opti-MEM I (Invitrogen), as recommended by the manufacturer.
Plasmids used: pcDNA3.1 empty vector (Clontech); pEGFP-C1 empty vector (Clontech); pCMV-Script H19 (BamH1/EcoRI) kindly provided by Dr. Imad Matouk, the Hebrew University of Jerusalem, Israel; pCMV-Script H19 mut (BamH1/EcoRI) was generated by mutating the miR-675 sequence within H19 (3 nucleotides in the seed sequence of the miR and 3 nucleotides outside the seed). The primers used for mutagenesis were the following:
For: 5′ tgtacaggcgaggtccgacagtggacttgg 3′
Rev: 5′ tgtcggacctcgcctgtacagaccctgggc 3′
p-Myc-EZH2 vector was kindly provided by Dr.ssa Daniela Palacios, Fondazione Santa Lucia IRCCS, Roma.
The generation of stably transfected A172 cell lines was obtained by growing cells in medium containing the selective agent, G418, 1 mg/ml for three weeks.
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5

Cytotoxicity and Oxidative Stress Evaluation

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If not otherwise specified, all the substances, among which were 3-(4,5 dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT; CAS number: 298-93-1; purity ≥ 98%), tert-butyl hydroperoxide (tBOOH; 70% wt in H2O), 2,7-dichlorofluorescein diacetate (DCFH-DA; CAS number: 4091-99-0; purity ≥ 97%), anti-NF-E2 primary antibody (ABE413), montelukast (MNT; CAS number: 151767-02-1; purity ≤ 100%), and the solvent dimethyl sulfoxide (DMSO; CAS number: 67-68-5; for molecular biology), were purchased from Merck (Darmstadt, Germany). All the materials used for cell cultures, including the RPMI 1640 medium, fetal bovine serum, cofactors, and antibiotics, were provided by Aurogene (Rome, Italy).
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6

Compound Isolation and Solubilization

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The chemicals β-caryophyllene (≥98.5% purity), β-caryophyllene oxide (95% purity), and verapamil hydrochloride (≥98.0% purity) were purchased from Merck Life Science S.r.l. (Milan, Italy), while sorafenib tosylate (≥99.0% purity) and MK571 (≥96.0% purity) were purchased from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA, USA). Dulbecco’s Modified Eagle’s medium (DMEM), Roswell Park Memorial Institute (RPMI) 1640 culture medium, fetal bovine serum, buffer, and cofactors were from Aurogene S.r.l. (Rome, Italy). EtOH (100% v/v) was used to dissolve β-caryophyllene and β-caryophyllene oxide, while DMSO (100% v/v) was used for sorafenib tosylate, verapamil hydrochloride, and MK571. Solvents were used up to 1% v/v nontoxic concentration.
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7

Synthesis and Characterization of Ligand-Metal Complexes

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The synthesis of the ligands and complexes was performed according to the protocol described by Sgarbossa and co-workers [18 (link)]. Complexes and ligands were dissolved in DMSO as a 10 mM stock solution and stored at room temperature. SB202190, AZD6244, and SP600125 were purchased from Selleck Chemical (Houston, TX); they were dissolved in DMSO as a 20 mM stock solution and stored at −20 °C. Vanadyl sulfate (VOSO4), 4’,6-diamidino-2-phenylindole (DAPI), Mowiol® 4-88, RNase, propidium iodide, EDTA, protease inhibitor cocktails, and monoclonal anti-β-actin antibody were purchased from Sigma-Aldrich (St. Louis, MO). VOSO4 was freshly dissolved in medium. DMEM, DMEM-F12, RPMI 1640, and fetal bovine serum (FBS) were purchased from Aurogene (Rome, IT). EGF, insulin, hydrocortisone, penicillin/streptomycin antibiotic mixture, amphotericin B, and glutamine were purchased from Sigma-Aldrich (Milan, IT).
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8

Alginate-Based Curcumin Formulation Development

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Sodium alginate (Ph.Eur. grade, MW 180-300 kDa, Lot. 9C260/DOC) was purchased from Carlo Erba reagents (Milano, Italy). Yeast extract, tryptone, NaCl and antibiotics for E. coli growth were from Duchefa Biochemie. For cell culture, Dulbecco's modified eagle medium (DMEM) was purchased from Lonza Group (Basel, Switzerland), fetal bovine serum (FBS), penicillin/streptomycin solution and trypsin/ EDTA solution were from Aurogene (Rome, Italy), and Resazurin sodium salt was from Alfa Aesar (Ward Hill, MA, USA). Curcumin, 2, 2diphenil-1-picrylhydrazyl (DPPH) and all the other products and chemicals used during the experiments were obtained from Sigma Aldrich (St. Louis, USA) and were of reagent grade with the highest purity available. Deionized ultra-filtered water was used throughout this study.
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9

Isolation and Characterization of Calvarium-Derived Mesenchymal Stromal Cells

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Human calvarial osteoblasts (HCO) were obtained from ScienCell Research Laboratories (Carlsbad, CA, USA) and cultured in DMEM (Gibco) containing 10% FBS (Atlanta Biologicals) and 1% penicillin-streptomycin (Gibco). HCO cells were used for luciferase assay (see further sections). Calvarium-derived mesenchymal stromal cells (CMSC) were isolated in primary explant tissue culture from open and fused sutures of 33 NCS patients (16 metopic and 17 sagittal), and cultured in DMEM (Aurogene, Rome, Italy) containing 10% FBS (Aurogene), 1% L-glutamine (Euroclone, Milan, Italy) and 1% penicillin-streptomycin (Euroclone), according to standardized methods as described [32 (link)]. Cells were characterized by cytometry and CMSC phenotype was confirmed (data not shown) [33 (link)]. Confluent CMSC culture were detached by trypsin digestion and collected for RNA isolation. All CMSC were used between the third (P3) and fourth (P4) passage of culture.
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10

Murine Macrophage Cell Line Cultivation

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A murine monocyte/macrophage J774 cell
line was obtained from the American Type Culture Collection (ATTC
TIB 67). The cell line was grown in adhesion in Dulbecco’s
modified Eagle’s medium (DMEM) supplemented with glutamine
(2 mM, Aurogene Rome, Italy), Hepes (25 mM, Aurogene Rome, Italy),
penicillin (100 U/mL, Aurogene Rome, Italy), streptomycin (100 μg/mL,
Aurogene Rome, Italy), fetal bovine serum (FBS, 10%, Aurogene Rome,
Italy), and sodium pyruvate (1.2%, Aurogene Rome, Italy) (DMEM completed).
The cells were plated at a density of 1 × 106 cells
in 75 cm2 culture flasks and maintained at 37 °C under
5% CO2 in a humidified incubator until 90% confluence.
The culture medium was changed every 2 days. Before a confluent monolayer
appeared, the subculturing cell process was carried out.
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