The largest database of trusted experimental protocols

4 protocols using bestatin

1

Colorimetric Assay for APN Activity

Check if the same lab product or an alternative is used in the 5 most similar protocols
APN enzymatic activity was determined by colorimetric measurement of the hydrolysis of the substrate L-alanine 4-nitroanilide hydrochloride (Sigma, USA), as described previously [17 (link)]. Briefly, 1 × 105 cells (in 50 µl PBS with 10% FBS) were placed in flat-bottom wells of 96-well culture plates and were preincubated with the indicated mAb or Bestatin for 1 h at 37°C. Bestatin (Santa Cruz Biotechnology, Dallas TX, USA), a well-known CD13 inhibitor, was added at the maximal inhibitory doses of 4 µg/ml for U-937 cells and 40 µg/ml for HEK-ANPEP. After incubation of the cells with the mAbs or with Bestatin, substrate was added to a final concentration of 6 mM and the plates were incubated for 1 h at 37°C. Cells were pelleted, and the absorbance of the supernatants at 405 nm was determined immediately. Determinations were performed in triplicate wells. Data are presented as percentage of the activity of control cells, which were not incubated with mAbs or Bestatin before addition of the substrate.
+ Open protocol
+ Expand
2

Detailed Lipidomic Analysis of Primary Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Histopaque, p-nitrophenyl valerate (pNPVa), and LPS (E. coli 055:B5) were purchased from Sigma (St. Louis, MO, USA). AIM V® Serum Free Medium was purchased from Thermo-Fisher (Waltham, MA, USA). RIPA lysis buffer and protease inhibitors (phenylmethylsulfonyl fluoride, PMSF; 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBSF; bestatin; pepstatin A; leupeptin hemisulfate; and aprotinin) were from Santa Cruz Biotechnology (Dallas, TX, USA). Antibodies used for Western blots (anti-CES1, anti-MAGL, β-actin, goat anti-rabbit, and goat anti-mouse) were purchased from Abcam (Cambridge, MA, USA). Authentic 2-AG, anandamide, AA, and its deuterated analog AA-d8 were purchased from Cayman Chemical Company (Ann Arbor, MI, USA). Small molecules JZL184 and WWL113 were purchased from Sigma. CpG was purchased from InvivoGen (San Diego, CA, USA). Primary CES1 and MAGL antibodies for flow cytometry were purchased from Abcam. Fluorescence secondary antibodies for flow cytometry and antibodies against IL-6 used to neutralize IL-6 or perform ELISA were purchased from Biolegend (San Diego, CA, USA). For some of the experiments, monocyte-depleted (n = 1) and whole PBMCs (n = 5) were purchased from Astarte Biologics (Bothell, WA, USA).
+ Open protocol
+ Expand
3

Ld Leucine Aminopeptidase Kinetics

Check if the same lab product or an alternative is used in the 5 most similar protocols
The amidolytic activity of the LdLAP was determined in vitro in a metal cofactor-supplemented
biochemical assay
in 50 mM Tris-HCl (pH 8.0) buffer by measuring the liberation of l-leucine from the fluorogenic peptide substrate, Leu-AMC (Sigma-Aldrich).
Release of AMC was monitored at 37 °C on a TECAN Infinite M200
Pro spectrofluorometer with a λex and λem pair of 355 and 460 nm, respectively. For steady-state kinetic
parameters, fluorescence was employed to deduce product formation
(AMC) by utilizing an AMC standard curve. Data was plotted, and all
parameters were determined in GraphPad Prism. To study the inhibitory
efficacy of peptidomimetics like bestatin, amastatin, and actinonin
(Santa Cruz Biotechnology) on the amidolytic activity, the LdLAP was preincubated in assay buffer with inhibitors (0
to 20 nM) for 30 min at 37 °C before the addition of a substrate
to measure the residual amidolytic activity. The mode of inhibition
was deduced with double-reciprocal plots.
+ Open protocol
+ Expand
4

Cathepsin C and Aminopeptidase N Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Recombinant CatC and APN were from Unizyme Laboratories (Hørsholm, Denmark) and R&D Systems (Lille, France), respectively. Antibodies against CatC included: mouse mAb (Ab1) (Santa Cruz Biotechnology, Heidelberg, Germany), goat polyclonal antibody (Ab2) (R&D Systems), and goat polyclonal antibody (Ab3) (Everest Biotech, Oxforshire, UK). The mouse mAb against APN was from Santa Cruz Biotechnology. Gly-Phe-AMC was from Enzyme Systems Products (Illkirch, France) and Ala-AMC was from Bachem (Weil am Rhein, Germany). The cysteine proteinase inhibitor E64c [(2S,3S)-trans-epoxysuccinyl-L-leucylamido-3-methylbutane)] was from Sigma-Aldrich (St Louis, MO, USA), the specific inhibitor of CatC, Thi-Phe-CN [(b-2-thienyl)-L-alanyl-L-phenylalanine nitrile)], was provided by Dr Adam Lesner (University of Gdansk, Poland). EDTA was from Merk (Darmstadt, Germany), and bestatin, the specific inhibitor of APN, was from Santa Cruz Biotechnology (Heidelberg, Germany).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!