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2 protocols using dapt n n 3 5 difluorophenacetyl l alanyl s phenyl glycine t butyl ester

1

Synthesis and Characterization of Pyrazole and Pyridine Compounds

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RIN-1 (2-(2-Fluorophenoxy)-4-(1-methyl-1H-pyrazol-5-yl)benzamide)) and CB-103 (6-(4-Tert-butylphenoxy)pyridin-3-amine)) were purchased from Selleck Chemicals GmbH (Munich, Germany). DAPT [N-[N-(3,5-Difluorophenacetyl)-L-alanyl]-S-phenyl-glycine t-butyl ester] was purchased from Merck. Compounds' Stock solutions (50 mM) were prepared in DMSO according to the manufacturer's instruction and stored at −80 °C. All other consumables were obtained from Merck (Darmstadt, Germany) unless indicated differently.
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2

Cadherin and Beta-Catenin Assay

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The following primary antibodies were used: rabbit anti-Pan-cadherin (C3678, Sigma-Aldrich, St. Louis, MO) that recognizes the conserved C-terminal domain of classic cadherins, mouse anti-N-cadherin (clone 32) and anti-E-cadherin (clone 36), both from BD Biosciences (Franklin Lakes, New Jersey, USA), rabbit anti-β-catenin (Invitrogen-Molecular Probes, Carlsbad, CA), mouse anti-active-β-catenin (clone 8E7, Millipore, Billerica, MA, USA), mouse anti-lamin A∖C (BD Biosciences), and mouse anti-α-tubulin (clone DM1a, Sigma-Aldrich). Secondary antibodies were Alexa Fluor™ 488 goat anti-rabbit IgG, Alexa Fluor™ 546 rabbit anti-mouse IgG (Invitrogen, Life Technologies, Brazil, São Paulo, SP, Brazil), and peroxidase-conjugated goat anti-rabbit and rabbit anti-mouse (Promega, Madison, WI). DAPI dihydrochloride (Invitrogen) was used for nuclear staining. The γ-secretase activity inhibitor Dapt (N-N[-(3,5-Difluorophenacetyl-l-alanyl)]-S-phenylglycine-t-butyl-ester) was from Merck Biosciences (Darmstadt, Germany). Nuclear and cytoplasmic fractions were extracted using NE-PER® Nuclear and Cytoplasmic Extraction Reagents (Pierce Biotechnology, Rockford, IL).
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