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3 amino 9 ethylcarbazole substrate

Manufactured by Merck Group
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3-amino-9-ethylcarbazole substrate is a chemical compound used as a chromogenic substrate in various laboratory applications. It is a versatile reagent that can be used to detect and visualize the presence of specific enzymes or proteins in biological samples. The core function of this substrate is to undergo a color-producing reaction when in contact with the target analyte, enabling the visual detection and analysis of the sample.

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17 protocols using 3 amino 9 ethylcarbazole substrate

1

Immunohistochemical Analysis of COX-2 in Tumor Sections

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Formalin-fixed and paraffin-embedded tumor and spheroid sections (3 µm) were dewaxed using Roticlear (Carl Roth, Karlsruhe, Germany) and rehydrated in a graded series of ethanol. Antigen retrieval was performed in 10 mmol/L citrate buffer pH 6 intermittently heated to 100 °C in 5 min intervals. Washing was performed using 0.05 mol/L Tris-buffered saline pH 8 containing 0.5% (v/v) Tween-20 (TBS-T). Endogenous peroxidase was quenched using 3% H2O2 in TBS-T. Endogenous avidin and biotin were blocked using a commercially available avidin/biotin quenching system (Agilent, Santa Clara, CA, USA). Non-specific binding sites were blocked using 10% fetal bovine serum (v/v) in TBS-T. COX-2 was detected using the primary antibody ab15191 (Abcam, Cambridge, UK). Isotype controls were incubated with non-specific rabbit IgG ab27478 (Abcam). Specific binding was detected using the biotinylated secondary antibody 111-065-003 (Dianova, Hamburg, Germany) and ExtrAvidin-peroxidase E2886 (Sigma-Aldrich, St. Louis, MO, USA) followed by staining with 3-amino-9-ethylcarbazole substrate (Sigma-Aldrich). Tumor sections were counterstained with Meyer’s hematoxylin, mounted with Kaiser’s glycerol gelatin (Carl Roth), and imaged using the AXIO Imager A1 microscope (Carl Zeiss, Oberkochen, Germany).
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2

Quantification of Dsg-specific Memory B Cells

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Dsg-specific memory B cells were measured using a polyclonal stimulation assay, essentially as previously described (Pinna et al., 2009 (link)). Briefly, PBMCs were cultured at 1×106 cells/mL in RPMI supplemented with penicillin/streptomycin, L-glutamine, 10% FBS, a 50 μM of beta-mercapto-ethanol (Sigma) (R10) containing R848 (1 μg/mL, Invivogen) and recombinant human-IL2 (10 ng/mL, Biolegend) for 3 days at 37°C. Total and Dsg3-specific IgG-secreting cells were quantified by ELISPOT assay, in which a 96-well ELISPOT filter plates (Millipore) were coated overnight with rDsg3 antigen (3 μg/mL, provided by the Hertl Lab), rDsg1 antigen (3 μg/mL, EuroImmun), or polyvalent goat anti-human Ig (25 μg/mL, Rockland) in PBS/1 mM CaCl2. Plates were washed and blocked by incubation with R10 at 37°C for 2 h. PBMCs were added to the plates in a dilution series and incubated for 5 hs at 37°C. Plates were washed with PBS, followed by PBS/0.05% Tween, and incubated with biotinylated anti-human IgG antibody (Invitrogen) at room temperature for 90 min. After washing, plates were incubated with an avidin-D horseradish peroxidase conjugate (Vector laboratories) and developed using 3-amino-9-ethyl-carbazole substrate (Sigma). Plates were scanned and analyzed using an automated ELISPOT counter (CTL, Cellular Technologies).
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3

Quantification of Dsg-specific Memory B Cells

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Dsg-specific memory B cells were measured using a polyclonal stimulation assay, essentially as previously described (Pinna et al., 2009 (link)). Briefly, PBMCs were cultured at 1×106 cells/mL in RPMI supplemented with penicillin/streptomycin, L-glutamine, 10% FBS, a 50 μM of beta-mercapto-ethanol (Sigma) (R10) containing R848 (1 μg/mL, Invivogen) and recombinant human-IL2 (10 ng/mL, Biolegend) for 3 days at 37°C. Total and Dsg3-specific IgG-secreting cells were quantified by ELISPOT assay, in which a 96-well ELISPOT filter plates (Millipore) were coated overnight with rDsg3 antigen (3 μg/mL, provided by the Hertl Lab), rDsg1 antigen (3 μg/mL, EuroImmun), or polyvalent goat anti-human Ig (25 μg/mL, Rockland) in PBS/1 mM CaCl2. Plates were washed and blocked by incubation with R10 at 37°C for 2 h. PBMCs were added to the plates in a dilution series and incubated for 5 hs at 37°C. Plates were washed with PBS, followed by PBS/0.05% Tween, and incubated with biotinylated anti-human IgG antibody (Invitrogen) at room temperature for 90 min. After washing, plates were incubated with an avidin-D horseradish peroxidase conjugate (Vector laboratories) and developed using 3-amino-9-ethyl-carbazole substrate (Sigma). Plates were scanned and analyzed using an automated ELISPOT counter (CTL, Cellular Technologies).
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4

Quantification of Peptide-Reactive T Cells

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Peptide reactive T cells were quantified using ELISPOT kits (Mabtech, Inc., Mariemont, OH). Briefly, plates were coated with capture anti-IFN-γ or anti-IL-17 antibodies. Splenocytes from C57BL/6, HLA-A2, K14-SCF, h3TA2 or Vitesse mice were cultured in RPMI1640 plus 10%FBS in presence of 10-30μg/ml mouse (FMDGTMSQV) and human (YMDGTMSQV) tyrosinase peptides (Pi Proteomic, LLC, Huntsville, AL) or PBS and plated at 5×10(5) cells/well. After 24h for IFN-γ or 48h for IL-17 detection, cytokine secreting cells were detected using biotinylated anti-cytokine antibodies, followed by horseradish peroxidase-conjugated streptavidin (Mabtech, Inc.) and 3-amino-9-ethylcarbazole substrate (Sigma-Aldrich). Cytokine secreting cells were quantified using a CTL-ImmunoSpot S6 Micro Analyzer (Cellular Technology Ltd, Shaker Heights, OH). For intracellular cytokine staining, see above section
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5

Quantifying H7HA-specific IgG and IgA ASCs

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ELISPOT assays were used to determine H7HA-specific IgG and IgA ASCs. Splenocytes and CLNs were collected from immunized mice 3 weeks after the final vaccination. Multiscreen 96-well filtration plates (Merck Millipore, Darmstadt, Germany) were coated with rH7 proteins (1 µg per well) and incubated overnight at 4 °C followed by blocking with 200 µL/well of complete RPMI 1640 (10% fetal bovine serum [FBS], 1 × penicillin/streptomycin, 1 × sodium pyruvate, 1 × nonessential amino acids, and 100 µM β-mercaptoethanol) at RT for 1 h. Next, 5 × 105 splenocytes or CLN cells were added to each well and incubated at 37 °C for 48 h. After three washes with PBST, HRP-conjugated anti-mouse IgG or HRP-conjugated anti-mouse IgA was added to each well for IgG- or IgA-ASCs, respectively. After overnight incubation at RT, and PBST and two PBS washes, 3-amino-9-ethylcarbazole substrate (Sigma-Aldrich, St. Louis, MO, USA) was added, followed by incubation at RT for 0.5–1 h before washing with double-distilled water. Immunospots were determined using an ELISPOT plate reader (CTL, Inc., Cleveland, OH, USA).
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6

ELISPOT Assay for Dsg3-Specific Plasmablasts

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ELISPOT was performed to enumerate Dsg3-specific plasmablasts present in PBMC samples. 96-well ELISPOT assay filter plates (Millipore) were coated overnight with recombinant Dsg3 antigen (3 μg/mL, provided by Hertl Lab) or polyvalent goat anti-human Ig (50 μg/mL, Rockland) in PBS/ 1mM CaCl2. Plates were washed and blocked by incubation with R10 at 37°C for 2 h. Freshly isolated PBMCs were added to the plates in a dilution series starting at 5×105 cells and incubated overnight at 37°C. Plates were washed with PBS, followed by PBS/0.05% Tween, and then incubated with biotinylated anti-human IgG, IgA, or IgM antibody (Invitrogen) at room temperature for 90 min. After washing, plates were incubated with avidin D-horseradish peroxidase conjugate (Vector laboratories) and developed using 3-amino-9-ethyl-carbazole substrate (Sigma). Plates were scanned and analyzed using an automated ELISPOT counter (CTL, Cellular Technologies).
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7

ELISPOT Assay for Dsg3-Specific Plasmablasts

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ELISPOT was performed to enumerate Dsg3-specific plasmablasts present in PBMC samples. 96-well ELISPOT assay filter plates (Millipore) were coated overnight with recombinant Dsg3 antigen (3 μg/mL, provided by Hertl Lab) or polyvalent goat anti-human Ig (50 μg/mL, Rockland) in PBS/ 1mM CaCl2. Plates were washed and blocked by incubation with R10 at 37°C for 2 h. Freshly isolated PBMCs were added to the plates in a dilution series starting at 5×105 cells and incubated overnight at 37°C. Plates were washed with PBS, followed by PBS/0.05% Tween, and then incubated with biotinylated anti-human IgG, IgA, or IgM antibody (Invitrogen) at room temperature for 90 min. After washing, plates were incubated with avidin D-horseradish peroxidase conjugate (Vector laboratories) and developed using 3-amino-9-ethyl-carbazole substrate (Sigma). Plates were scanned and analyzed using an automated ELISPOT counter (CTL, Cellular Technologies).
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8

ELISPOT Assay for EV-A71-Specific Antibody Response

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According to our previous study (35 (link)), Enzyme-linked immunospot (ELISPOT) was used to detect EV-A71-specific IgG- and IgA-secreting cells. We coated 96-well microplates (Millipore, United States) with purified EV-A71 virions (10 μg/ml) overnight and blocked the wells with 3% BSA in PBS. Then, spleen cells (5 × 105) in RPMI-10% FBS were added and incubated overnight at 37°C. Following incubation, the plate was washed, and HRP-conjugated goat anti-mouse IgGs (1:000, Bethyl Laboratories, Inc.) or IgAs (1:000, Bethyl Laboratories, Inc.) was added. After incubating plates for 2 h, the HRP conjugate was removed and washed. Then, 100 μl of 3-amino-9-ethylcarbazole substrate (Sigma) was added and spots were allowed to develop in the dark at room temperature (RT) for 10 min. After ELISPOT analysis was completed, the plate was analyzed using an ImmunoSpot® S6 UV Reader (Cellular Technology Limited, Cleveland, OH, United States). ImmunoSpot® v.6.0 Software was used to automatically count the spots for each EV-A71 antigen stimulation condition and medium negative controls. Spots from a total of three wells with 1.5 × 106 spleen cells were determined and considered as one set of data.
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9

ELISPOT Assay for Peptide-Specific T Cells

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The ELISPOT assay was performed according to an established laboratory protocol. 96-well multiscreen-HTS plates (Millipore) were coated with 10μg/mL anti-human IFNγ (clone 1-D1K, Mabtech, Mariemont, OH) in PBS overnight at 4°C, washed with PBS, and blocked for 2 h with complete media at 37°C. T cells collected after in vitro immunization assays were plated at 2 × 105 cells/well in six replicate wells in the presence or absence of the HLA-A*0201 restricted peptides for 18 h at 37°C, 5% CO2 [30 (link)]. Wells were washed with PBS/0.5% Tween-20 and incubated with 1μg/mL biotinylated anti-human IFNγ antibody (clone 7-B6-1, Mabtech), for 2 h followed by incubation for 1 h with streptavidin-HRP (Sigma, St. Louis, MO). Spot development was carried out with 3-amino-9-ethyl-carbazole substrate (Sigma). Spots were counted using the video-imaging KS ELISPOT analysis system (Carl Zeiss, Thornwood, NY). The number of spots in the medium control wells were subtracted from spots detected in antigen-specific stimulation wells and was subsequently calculated as number of HPV peptide-specific T cells per million PBMC.
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10

IFN-γ Secreting Cells Detection via ELISpot

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IFN-γ secreting cells were detected via ELISpot as previously described [6 (link), 20 (link)]. MultiScreen assay plates (Millipore) were treated with 15 μL of 35% ethanol and washed three times with sterile PBS (Gibco). Plates were coated with 50 μL of 10 μg/mL α-mouse IFN-γ (AN18, Mabtech) and incubated overnight at 4 °C. Plates were washed as before, wells blocked with 200 μL of CTL medium for a minimum of 2 h at 37 °C, 2.5 × 105 lymphocytes were added into wells with or without 10 ng/mL (final concentration) of AT-2 inactivated HIV-1 IIIB viral lysate or 10 μg/mL synthetic 17-mer MPER peptide, GNEQELLELDKWASLWN in CTL medium; additional wells included 50 ng/mL phorbol-myristate-acetate and 300 ng/mL ionomycin as a positive control [33 (link)]. Lymphocytes were incubated over two nights at 37 °C in 5% CO2, then washed 6 times with PBST, and 100 μL filtered biotinylated IFN-γ detection antibody (Mabtech) was added at 1 μg/mL in 0.5% FBS/PBS for 3.5 h at RT. Plates were washed 6 times with PBST, and streptavidin-HRP (1 μg/ml, Pierce Thermo Fisher Scientific) in 5% FBS/PBS was added for 1 h at RT, followed by 3 PBST and 3 PBS washes. Plates were developed with 3-amino-9-ethylcarbazole substrate (Sigma-Aldrich) for 10 min at RT. Spots were counted in an ImmunoSpot analyzer (Cellular Technology Limited).
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