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6 protocols using sniper universal blocking sera

1

Characterization of Epithelial-Mesenchymal Transition

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Resected tissues were fixed in 10% formalin followed by 80% ethanol, paraffin embedded, sectioned, and deparaffinized in xylenes and hydrated through graded ethanol solutions. Antigen retrieval was performed in Reveal Decloaker (Biocare Medical) and background staining was minimized by blocking in Sniper Universal Blocking Sera (Biocare Medical). Slides were stained using anti-vimentin, anti-ncadherin, and anti-MMP9 antibodies (Cell Signaling) and incubated overnight. Alexefluor fluorescent antibody conjugates were used following primary antibody staining. Slides were counterstained by DAPI Prolong gold mounting medium (Life Technologies) and visualized by Leica fluorescent microscope. Negative controls were incubated with mouse IgG1 isotype control and did not demonstrate and specific staining.
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2

Comprehensive Immunohistochemical Analysis of Tumor Stroma

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For immunohistochemistry, paraffin tissue sections were deparaffinized in xylenes and hydrated through graded ethanol. Hematoxylin and Eosin (H&E) staining were used for evaluation of histological features. Sirius Red staining was used to visualize the collagen in the tumor stroma, Slides were steamed with Reveal Decloaker (Biocare Medical) to minimize background staining. Sniper Universal Blocking Sera (Biocare Medical) were used throughout the protocol. Primary antibodies for alpha SMA, CD31 (Abcam), HABP-Biotin (Sigma) were diluted according to vendor's instruction and incubated overnight at 4°C. The primary antibody was omitted for the negative controls. For immunofluorescence, fluorescent antibody conjugates were used after primary antibody staining. Slides were counterstained with DAPI and visualized in a Nikon fluorescent microscope. Tissue samples were incubated with mouse IgG1 isotype controls (BD Biosciences) and did not demonstrate any specific staining.
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3

Immunohistochemistry and TUNEL Assay for Tissue Analysis

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For immunohistochemistry, paraffin tissue sections were deparaffinized in xylene and hydrated through graded ethanol. Slides were steamed with a Reveal Decloaker (Biocare Medical) to minimize background staining. Sniper Universal Blocking Sera (Biocare Medical) were used throughout the protocol. The slides were stained using anti- Ki67, anti- HSP 70 antibody (Abcam) and anti-GRP78 antibody (Cell signaling). Staining was detected using anti-rabbit secondary antibody conjugated to HRP followed by diaminobenzidine peroxidase (DAB) substrate kit (Vector Laboratories). The tissue sections were counterstained with Gill’s hematoxylin (Vector Laboratories). The primary antibody was omitted for the negative controls. TUNEL was performed using the In situ cell death determination kit (Roche Diagnostics) according to manufacturer’s protocol. For immunofluorescence, fluorescent antibody conjugates were used after primary antibody staining. Slides were counterstained with DAPI and visualized in a Nikon fluorescent microscope. Tissue samples were incubated with mouse IgG1 isotype controls (BD Biosciences) and did not demonstrate any specific staining.
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4

Histological and Immunofluorescence Analysis of Tumor Samples

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Tumor from all groups of mice were sectioned for histological studies. The tissue samples were fixed in 10% formalin and embedded in paraffin. The sections (5 μm) were cut using microtome, stained with hematoxylin and eosin, and slides were assessed using microscope (Leica microsystems, Germany) using at original magnification 10× and processed in Adobe Photoshop. For the immunofluorescence study, paraffin embedded sections were deparaffinized with xylene followed by rehydration with descending alcohol series. Slides were steamed with Reveal Decloaker (Biocare Medical), to minimize background staining, Sniper Universal Blocking Sera (Biocare Medical) was used throughout the protocol. Primary antibodies for Ki67 (Invitrogen), cd133 (Invitrogen) were diluted according to the manufacturer’s instruction and incubated overnight at 4 °C. Subsequently, Alexa Fluor-conjugated secondary antibody (Invitrogen) were used for visualizing. Slides were counterstained with DAPI and observed in a Leica fluorescent microscope. Negative control slides were used to discriminate nonspecific staining.
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5

Characterization of Epithelial-Mesenchymal Transition

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Resected tissues were fixed in 10% formalin followed by 80% ethanol, paraffin embedded, sectioned, and deparaffinized in xylenes and hydrated through graded ethanol solutions. Antigen retrieval was performed in Reveal Decloaker (Biocare Medical) and background staining was minimized by blocking in Sniper Universal Blocking Sera (Biocare Medical). Slides were stained using anti-vimentin, anti-ncadherin, and anti-MMP9 antibodies (Cell Signaling) and incubated overnight. Alexefluor fluorescent antibody conjugates were used following primary antibody staining. Slides were counterstained by DAPI Prolong gold mounting medium (Life Technologies) and visualized by Leica fluorescent microscope. Negative controls were incubated with mouse IgG1 isotype control and did not demonstrate and specific staining.
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6

Immunohistochemical Analysis of GLUT1 and CD133

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For immunohistochemistry, paraffin tissue sections were deparaffinized in xylenes and hydrated through graded ethanol. Hematoxylin and Eosin (H&E) staining were used for evaluation of histological features. Slides were steamed with Reveal Decloaker pH9.0 (Biocare Medical) for antigen retrieval of GLUT1 antibody (Sigma) and CD133 antibody. Sniper Universal Blocking Sera (Biocare Medical) were used throughout the protocol. Primary antibodies were diluted according to vendor's instruction and incubated overnight at 4°C. The primary antibody was omitted for the negative controls. For immunofluorescence, fluorescent antibody conjugates were used after primary antibody staining. Slides were counterstained with DAPI and visualized in a Nikon fluorescent microscope. Tissue samples were incubated with mouse IgG1 isotype controls (BD Biosciences) and did not demonstrate any specific staining.
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