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Zen 2.3 lite blue edition software

Manufactured by Zeiss

Zen 2.3 lite (blue edition) is a software application developed by Zeiss for microscopy data acquisition and analysis. It provides a user-friendly interface for basic microscope control and image processing functionalities.

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4 protocols using zen 2.3 lite blue edition software

1

Cell Morphology and Viability Analysis

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Cell morphology was routinely checked using a Zeiss Axio Observer.Z1/7 microscope equipped with a LCI Plan-Neofluar 63x/1.3 water-immersion objective. Cell morphology was analyzed in bright-field mode. Pictures were processed with the Zen 2.3 lite (blue edition) software (Carl Zeiss Microscopy GmbH).
For cell size and viability measurements respective cultures were washed and diluted in PBS (KH2PO4 0.24 g L-1, Na2HPO4 2 H2O 1.8 g L-1, KCl 0.2 g L-1, NaCl 8 g L-1) followed by brief sonicatation. For viability measurements, cells were stained in the presence of 2mM propidium iodide (PI) before fluorescence (638 nm laser), forward and sideward scatter were measured at CytoFlex S flow cytometer (Beckman Coulter). Ethanol fixed cells were used as negative control. The size distribution of the cell population and the mean cell size was determined by calibration using a polystyrene particle size standard kit (SPHERO Flow Cytometry Size Standard Kit, Spherotech). Flow cytometry data was analyzed using CytExpert (version 2.3.0.84).
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2

Microscopic Analysis of eGFP-Expressing Cells

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Microscopy was performed with a Zeiss Axio Observer.Z1/7 microscope using a LCI Plan-Neofluar 63x/1.3 water immersion objective. Cell morphology was analyzed in bright-field mode. For fluorescence microscopy of eGFP-expressing cells, the 38 HE eGFP shift free (E) filter set (Zeiss) was used. Pictures were processed with the Zen 2.3 lite (blue edition) software (Carl Zeiss Microscopy GmbH).
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3

Cell Morphology and Viability Analysis

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Cell morphology was routinely checked using a Zeiss Axio Observer.Z1/7 microscope equipped with a LCI Plan-Neofluar 63x/1.3 water-immersion objective. Cell morphology was analyzed in bright-field mode. Pictures were processed with the Zen 2.3 lite (blue edition) software (Carl Zeiss Microscopy GmbH).
For cell size and viability measurements respective cultures were washed and diluted in PBS (KH2PO4 0.24 g L-1, Na2HPO4 2 H2O 1.8 g L-1, KCl 0.2 g L-1, NaCl 8 g L-1) followed by brief sonicatation. For viability measurements, cells were stained in the presence of 2mM propidium iodide (PI) before fluorescence (638 nm laser), forward and sideward scatter were measured at CytoFlex S flow cytometer (Beckman Coulter). Ethanol fixed cells were used as negative control. The size distribution of the cell population and the mean cell size was determined by calibration using a polystyrene particle size standard kit (SPHERO Flow Cytometry Size Standard Kit, Spherotech). Flow cytometry data was analyzed using CytExpert (version 2.3.0.84).
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4

Microscopic Analysis of Sporulating Cells

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For the analysis of sporulation, cells were mated and sporulated as described above. Sporulating cells were taken from agar plates and suspended in a drop of water on a Polysine microscopy slide (Thermo Scientific). The cells were then visualized using a Zeiss Axio Observer.Z1/7 microscope with a LCI Plan-Neofluar 63× water immersion objective (numerical aperture, 1.3) in bright-field mode. Images were processed with Zen 2.3 lite (blue edition) software (Carl Zeiss Microscopy GmbH).
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