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Model 5973n

Manufactured by Agilent Technologies
Sourced in United States

The Agilent Model 5973N is a mass spectrometer designed for gas chromatography-mass spectrometry (GC-MS) applications. It features a quadrupole mass analyzer and an electron ionization (EI) ion source. The instrument is capable of performing full-scan, selected ion monitoring (SIM), and multiple reaction monitoring (MRM) analyses.

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4 protocols using model 5973n

1

GC-MS Analysis of Crude Extracts

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GC–MS analyses were performed on selected crude ethanolic extracts to identify the chemical components. A gas chromatography system (Model 6890 N; Agilent Technologies, Shanghai, China), coupled with a mass selective detector (Model 5973 N; Agilent Technologies, Delaware, USA) and a GC auto-sampler (Agilent 7683 Automatic Liquid Sampler, Santa Clara, California, USA), was employed for all analyses. Briefly, 2 μL of crude extracts (10.40 mg of DC, 10.74 mg of LC) were injected into the GC column equipped with a capillary column (122–5532 DB-5 ms, length 30.0 m, diameter 250 μm, film thickness 0.25 µm). The injection temperature was set to 250 °C. Helium was used as the carrier gas at a constant flow rate of 2 ml/min. The oven temperature program was 80 °C for 6 min, followed by a 5 °C min−1 oven temperature ramp to 280 °C within 70 min. The mass spectra were recorded with a 50–500 MHz scanning range using mass spectrometry. The chromatograms and mass spectra of constituents of the crude extracts were evaluated by comparing their mass spectra with those in the database (Wiley 7N.l database, Agilent Technology, New York, USA).
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2

GC-MS Analysis of Volatile Compounds

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The volatile compounds were separated using an OV-1701 MS fused silica capillary column (60 m × 0.25 mm i.d. × 0.25 μm film thickness, Chromatographic Technology R&D, Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences) in an Agilent GC-MS system (Agilent Technologies, USA) utilizing a model 6890N gas chromatograph and a model 5973N mass selective detector. The GC oven temperature was initially held at 50℃ for 1 min, increased at a rate of 3.5℃/min to 220℃ where it was held for a further 20 min. For SPME, the injector, heated at 260℃, was held in the splitless mode for the first 2 min of the analysis and then in the split mode (20:1) for the remainder of the analysis. The SPME fiber remained in the injector for 15 min to clean the fiber with a solvent delay time of 3.5 min. Helium was used as the carrier gas with a constant flow rate of 1.0 mL/min. The MS was operated in electron ionisation mode (70 eV) and data was acquired in full scan mode for range of 30 to 550 m/z. The temperature of the source and the detector were 150 and 230℃, respectively, while the MS transfer line was 280℃.
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3

Extraction and Identification of Cyclic Fatty Acid Monomers from Linseed Oil

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Cyclic fatty acid monomers were extracted from heated linseed oil as previously described (Sebedio et al., 1987). In brief, linseed oil (Maison Orphée, Quebec City, QC, Canada) was heated in sealed tubes under nitrogen in a HP chromatograph oven (HP 68900 series) at 275°C for 12 hr. After saponification and methylation, CFAM were isolated by a combination of column chromatography and urea fractionation. Confirmation of CFAM isomers was performed by gas chromatography–mass spectrometry (GC‐MS) after picolinyl esters of CFAM were synthesized as previously described (Destaillats & Angers, 2002) and determination of each isomer of the 5‐membered and 6‐membered rings CFAM was by GC (Dobson et al., 1995). GC‐MS analyses for the confirmation of CFAM isomers structures were performed using a gas chromatograph (Hewlett‐Packard, Model 5890, Series II, Palo Alto, CA, USA) coupled with a selective quadrupole mass detector (Agilent, model 5973 N, Palo Alto, CA). Later, CFAM‐methyl esters were converted to free fatty acids by saponification (ethanol 95% and KOH) overnight at room temperature. The CFAM‐free fatty acids were filtered with 2% bentonite, and peroxides were neutralized with NaS2O3. The extracts were kept at −20°C until incorporation in the diet.
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4

GC-MS Quantification of DHA in Plasma

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A known quantity of plasma (100 μl) was hydrolyzed (alkaline conditions using KOH/ethanol solvent mixture and heated for 3 hrs at 85°C) and extracted with hexane, after adding a known amount of [2H5]DHA as internal standard. DHA and [2H5]DHA were analyzed as their trimethylsilyl derivatives (TBDMS) using gas chromatography-electron impact ionization mass spectrometry (GC-MS), as previously described but modified[22 (link)]. Briefly, a mass selective detector (model 5973N, Agilent) equipped with a gas chromatography system (GC-MS; model 6890, Agilent), coupled to a ZB-5MS capillary column (30 m _0.25 mm_ 0.25 μl) with a helium flow of 1.5 ml/min, was used. The starting oven temperature was 80°C and increased linearly to 220°C and held for 1 min. Derivatized samples were injected in splitless mode and analyzed by selected ion monitoring in EI mode. The m/z ions reflecting fragments for the GC/MS of the TBDMS derivatives of DHA and [2H5]-DHA were m/z 385 and m/z 390, respectively. DHA concentrations (mM) for each sample were quantified against the [2H5] -DHA internal standard using standard curve and regression analysis.
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