The largest database of trusted experimental protocols

6 protocols using rabbit anti p erk

1

Molecular Mechanisms of CUL4B-Mediated Lung Cancer

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human SCC cell lines, NCI-H520 and SK-MES-1, and human SCLC cell lines, DMS114 and NCI-H2227, were obtained from the American Type Culture Collection (Manassas, VA, USA). Antibodies were purchased from commercial sources, including rabbit anti-CUL4B antibody (1:50; Novus Biologicals, Littleton, CO, USA), rabbit anti-CUL4A (1:1,000; Cell Signaling Technology, Danvers, MA, USA), rabbit anti-FOXO3A (1:1,000; Cell Signaling Technology), rabbit anti-p-FOXO3A (1:1,000; Cell Signaling Technology), rabbit anti-cyclin E1 (1:1,000; Abcam, Cambridge, UK), rabbit anti-ERK (1:1,000; Abcam), rabbit anti-p-ERK (1:1,000; Abcam), rabbit anti-P21 (1:1,000; Proteintech, Rosemont, IL, USA), rabbit anti-CUL4B (1:1,000; Proteintech), rabbit anti-BCL-2 (1:1,000; Proteintech), rabbit anti-BAX (1:1,000; Proteintech), rabbit anti-caspase 3 (1:1,000; Proteintech), rabbit anti-UBC12 (1:1,000; Proteintech), and mouse anti-β-actin (1:1,000; Sigma-Aldrich, St. Louis, MO, USA). Si-RNAs were purchased from RiboBio (Guangzhou, China), including si-FOXO3A and si-UBC12. MG132, MLN4924, and PD98059 were purchased from Selleck Chemicals (Houston, TX, USA). Cycloheximide (CHX) was purchased from Absin (Shanghai, China).
+ Open protocol
+ Expand
2

Antibody Validation for ER Stress Pathway

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tun, thapsigargin, ML385 and common reagents were from Sigma. GSK606414 was from APExBio and CCT020312 from Calbiochem. Mouse anti-actin and rabbit anti-calnexin antibodies were from Sigma. Mouse anti-eIF2α was from Cell Signaling. Rabbit anti-phospho-eIF2α (Ser51) was from MBL. Rabbit anti-PERK was from Abcam. Rabbit anti-ATF4 was a kind gift from David Ron (Univ. Cambridge). Goat anti-mouse IgG conjugated to 488 DyeLight, goat anti-rabbit IgG conjugated to 564 DyeLight, and goat anti-rabbit and anti-mouse IgG conjugated to HRP were from Jackson Labs. Normal goat serum was from Vector Laboratories (Burlingame, CA).
+ Open protocol
+ Expand
3

Macrophage Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The collected macrophages were lysed with RIPA protein extraction reagent (Beyotime, Beijing, China) supplemented with protease inhibitor cocktail (Roche, Pleasanton, CA, US). The lysis products were subjected to sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis (PAGE) gels for electrophoresis, transferred to polyvinylidene fluoride (PVDF) membranes, blocked in 5% milk, and incubated with primary antibodies (1:1000, rabbit anti-CD23, rabbit anti-PU.1, rabbit anti-p-ERK, rabbit anti-IL-8, rabbit anti-CCL20) (Abcam Inc., Cambridge, MA, US) and secondary antibodies (1:5000, goat anti-rabbit IgG) (Abcam Inc., Cambridge, MA, US). Autoradiograms were quantified by densitometry with GAPDH as a control (Additional file 1).
+ Open protocol
+ Expand
4

Western Blot Analysis of UPR Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
The microglia from the control and experimental groups (1×107 cells/mL) were homogenized in the RIPA buffer (Beyotime, Shanghai, China). The protein concentrations were quantified using the BCA assay (Pierce, Rockford, IL) according to the manufacturer’s instructions. Then, 40 μg of whole cell protein lysates were boiled in 5μl sample buffer for 5 min followed by separation of the proteins by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). The separated proteins were transferred onto nitrocellulose membranes. The membranes were blocked with 5% non-fat dry milk in TRIS-buffered saline (TBS) for 1h and incubated overnight at 4oC with primary antibodies, namely, rabbit anti-IRE1α (1:500, Abcam, Camb, UK), rabbit anti-PERK (1:500, Abcam, Camb, UK), and rabbit anti-ATF6 (1:500, Abcam, Camb, UK), and mouse β-actin (1:1000, Abcam, Camb, UK). Then, after washing thoroughly, we incubated the blots with HRP-conjugated secondary antibodies (1:1000, Sigma, St. Louis, MO, USA) at room temperature for 2 h. The blots were developed using the Enhanced Chemiluminescence (ECL) kit (Cell Signaling Technology, Boston, USA). The levels of IRE1α, PERK and ATF6 proteins relative to β-actin expression were quantified using the Image J software (NIH, Bethesda, USA).
+ Open protocol
+ Expand
5

PERK Signaling Pathway Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Thapsigargin (Thap) (#T9033) and common reagents were from Sigma. Shrimp alkaline phosphatase (SAP #78390) was from ThermoFisher scientific. CCT020312 was from Calbiochem (purchased from Sigma #324879). MK-28 was synthesized as described before [13 (link)]. Rabbit anti-PERK was from Abcam (#ab65142). Mouse anti-actin (#A3853) and mouse anti-γ-tubulin (#T6557) were from Sigma. Goat anti-rabbit IgG (#111-035-144) and anti-mouse IgG (#115-035-166) conjugated to HRP were from Jackson Labs.
+ Open protocol
+ Expand
6

MERS-CoV and SARS-CoV-2 Protein Detection

Check if the same lab product or an alternative is used in the 5 most similar protocols
MERS-CoV N was detected with the in-house guinea pig anti–MERS-CoV N serum. MERS-CoV S was detected with the in-house mouse anti–MERS-CoV S immune serum. MERS-CoV M and SARS-CoV-2 M were detected with in-house mouse anti–MERS-CoV M and mouse anti–SARS-CoV-2 M immune serum, respectively. SARS-CoV M was detected with a rabbit anti–SARS-CoV M antibody from Rockland. Primary antibodies including rabbit anti–caspase-3, rabbit anti-PERK, rabbit anti-GRP78, and mouse anti-His were from Abcam. The mouse anti-CHOP antibody was from Cell Signaling Technology. The mouse anti-GRP78 was from R&D Systems. The mouse anti–β-actin was from Sigma-Aldrich. The V5-tagged proteins were detected with a mouse anti-V5 antibody from Immunoway. Secondary antibodies including Alexa Fluor 488 goat anti–guinea pig, Alexa Fluor 488 goat anti-mouse, and Alexa Fluor 568 donkey anti-rabbit were from Thermo Fisher Scientific. The goat anti-mouse horseradish peroxidase (HRP), goat anti-rabbit HRP, and goat anti–guinea pig antibodies from Thermo Fisher Scientific were used for Western blots and immunohistochemistry staining.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!