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Sodium azide

Manufactured by Thermo Fisher Scientific
Sourced in United States, United Kingdom, Belgium, Australia, Germany, New Zealand

Sodium azide is a chemical compound used in various laboratory applications. It is a white crystalline powder that is soluble in water and organic solvents. Sodium azide is a common preservative used to inhibit the growth of microorganisms in laboratory reagents and solutions.

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99 protocols using sodium azide

1

SEC-MALS Analysis of Stu2CC Protein

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A 100-μl sample of 45 μM Stu2CC was injected onto a Superdex 200 10/300 GL gel filtration column (GE Healthcare) in 25 mM HEPES, pH 7.5 (Calbiochem, MilliporeSigma, St. Louis, MO), 300 mM sodium chloride, 0.1% β-ME, 0.2 g/l sodium azide (Fisher Chemical) and run in-line with a Wyatt DAWN HELIOS II light scattering instrument and a Wyatt Optilab T-rEX refractometer (Wyatt Technology Corp., Goleta, CA). Molecular weight was calculated with light scattering and refractive index data using the Wyatt Astra V software package (Wyatt Technology Corp.). SEC-MALS data presented are representative of experiments conducted in duplicate.
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2

Comprehensive Analytical Reagent Protocol

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Sodium azide, sodium bromide, sodium chloride, potassium fluoride, potassium nitrate, sodium phosphate dibasic, sodium silicate, sodium sulfate, and sodium thiosulfate were obtained from Fisher Scientific (Fairlawn, NJ, USA). Sodium acetate, sodium arsenate, sodium carbonate, and potassium nitrite were purchased from J.T. Baker (Phillipsburg, NJ, USA). Lactic acid was acquired from Eastman (Kingsport, TN, USA). All reagents were of analytical grade. Ultra-pure CE water procured from Agilent Technologies (Santa Clara, CA, USA) from their Forensic Anion Solution Kit (PN 5064-8208).
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3

MRI Specimen Perfusion and Fixation

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Mice destined for MRI were sacrificed by CO2 asphyxiation and transcardially perfused using a peristaltic pump at a rate of 1 mL/min. Mice were first perfused with 40 mL of PBS containing 2 mM ProHance (Bracco Diagnostics) and 400 USP heparin (Fresnius Kabi), followed by 30 mL of PBS containing 2 mM ProHance and 4% paraformaldehyde (EMS). Skulls were decapitated and placed into PBS containing 2 mM ProHance and 4% paraformaldehyde (EMS). After an overnight incubation at 4°C, skulls were transferred to PBS containing 2 mM ProHance with 0.02% sodium azide (Fisher Scientific). Following 30-day incubation, skulls were scanned for MRI at the Mouse Imaging Centre in The Centre for Phenogenomics in Toronto, Ontario, Canada.
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4

NMR Analysis of RRM1 Binding

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The NMR heteronuclear single quantum coherence spectra were acquired using a Bruker 600 MHz magnet at the Central Alabama High Field NMR Facility at the University of Alabama at Birmingham. Samples were freshly prepared on the day of collection in 1× TBS with 2 mM BME, pH 6.8, supplemented with sodium azide (Fisher BioReagents) and deuterium oxide (99%; Cambridge Isotope Laboratories, Inc). The collected spectra were analyzed using computer-aided resonance assignment, and the peak lists were exported into Microsoft Excel for subsequent analysis. Briefly, CSPs identified using a combination of nearest neighbor and comparison to previous analysis of rBH3 binding and were quantified by calculating the ΔΔppm of each amino acid residue using the formula: √ΔδH2 + (ΔδN/5)2. Mean and standard deviation of the CSP for each residue was calculated in Microsoft Excel, and any residues demonstrating CSP >1 SD were considered significant. All spectra were collected in biological triplicate, and residues that demonstrated significant CSP in all three spectra were mapped to the ribbon model of RRM1 on PyMOL (pymol.org), using Protein Data Bank file 1SJQ: NMR structure of RRM1 from human polypyrimidine tract binding protein isoform 1 (PTB1). In Figure 4, AC, CSPs are plotted by residue, and examples of overlaid raw data, respectively, are shown from a representative spectra.
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5

Characterization of Sodium Hyaluronate Powders

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Three different lots of skim milk was purchased from a local grocery store (Great Value, Walmart, Brookings, SD, USA). The sodium azide was obtained from Fisher Scientific (Fair Lawn, NJ, USA). The food-grade HA (Sodium hyaluronate) powder samples having three different molecular weights, 10 kDa, 200 kDa, 800 kDa, were purchased from the Stanford Chemicals Company (Lake Forest, CA, USA). The research grade HA powder with a high molecular weight of >2500 kDa was obtained from the HA works (Bedminster, NJ, USA). According to the certificate of analysis provided by suppliers, the actual MW of HA powder samples were 8 kDa, 320 kDa, 980 kDa, and 2550 kDa. The appearance of the different HA powders was white with a fine crystal texture, and the purity was >95%.
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6

Caco-2 Cell Culture Protocol

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Corn oil was purchased from a local market (Albany, CA, USA). Sodium caseinate (Alanate 180) was purchased from Fonterra Co-operative Group (Auckland, New Zealand). Nystatin, 5-(N-Ethyl-N-isopropyl) amiloride (EIPA), phenylarsine oxide (PAO), Nile red, and FITC-dextran (MW 40 kDa) were purchased from Sigma-Aldrich (St. Louis, MO, USA) and used without further purification. Sodium azide was obtained from Fisher Scientific (Fair Lawn, NJ, USA). Dulbecco’s modified Eagle’s medium (DMEM) (containing 4.5 g/L D-glucose and GlutaMAX™), penicillin and streptomycin (100×), fetal bovine serum (FBS), TrypLETM Select, Hanks’ balanced salt solution (HBSS), and phosphate buffer solution (PBS) (10×) were purchased from GIBCO (Grand Island, NY, USA). Alexa Fluor 488 to mouse IgG and 4′,6-diamidino-2-phenylindole (DAPI) were purchased from Life Technologies (Carlsbad, CA, USA). Caco-2, a human epithelial colon adenocarcinoma cell line, was purchased from the American Type Culture Collection (Manassas, VA, USA). All other analytical grade chemicals and reagents were purchased from Fisher Scientific (Fair Lawn, NJ, USA). Ultrapure water was used in all experiments.
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7

Cytotoxicity Assay of Ruthenium Complexes

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DMSO, acetonitrile, sodium cacodylate, sodium azide, NH4PF6 and NaCl were purchased from Fisher Scientific. Dichloromethane was purchased from Honeywell. Methanol, N,N-dimethylformamide, ethanol, 2,2′-dipyridylamine (dpa), calf thymus DNA, Hoechst 33258 and 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) were purchased from Sigma-Aldrich. Diethylether, benzyl bromide and 1,10-phenanthroline were purchased from ACROS Organics. RuCl3·3H2O was purchased from Pressure Chemical. KOH and LiCl were obtained from Panreac and hydroquinone (viz. benzene-1,4-diol) from Riedel-de Haën. pBR322 plasmid was purchased from ThermoFisher Scientific. SYBR safe and 10 × TBE buffer were purchased from Invitrogen. Agarose was obtained from Ecogen. All solvents and reagents were used without further purification.
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8

Synthesis and Characterization of Fluorescent PAMAM Dendrimers

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Biomedical grade G5 PAMAM dendrimer was purchased from Dendritech Inc. and purified using rp-HPLC method to obtain G5 dendrimer without trailing generations (G1–G4), dimers, and trimers.26 (link) Aminofluorescein, trifluoroacetic acid, triethylamine, and acetic anhydride were purchased from Sigma-Aldrich (St. Louis, MO) and used as received. HPLC grade water,acetonitrile, and methanol, as well as dimethyl sulfoxide, hydrochloric acid, sodium azide, and sodium nitrite, were purchased from Fisher-Scientific and used as received. Click-Easy™ MFCO-N-hydroxysuccinimide was purchased from Berry & Associates Synthetic Medicinal Chemistry (Dexter, MI) and used as received. 5-carboxytetramethylrhodamine (TAMRA) succinimidyl ester was purchased from Life Technologies and used as received. Azido-fluorescein was synthesized using a literature protocol.27 (link) A 500 MHz Varian NMR instrument was used for all 1H and 19F NMR measurements. 19F spectra were referenced to the 19F signal of internal trichlorofluoromethane using a Ξ of 94.0940110. All MALDI-TOF-MS measurements were performed on a Bruker Ultraflex III.
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9

Naltrexone PLGA Nanoparticle Formulation

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Two PLGA copolymers molecular weights of 64 kDa and 79 kDa were
purchased from LACTEL® Absorbable Polymers (Birmingham, Alabama), and one
PLGA of 148 kDa from Evonik industries (Darmstadt, Germany). All three PLGAs
were ester end-capped and had the same L:G ratio of 85:15. Naltrexone base
anhydrous was purchased from Mallinckrodt Pharmaceuticals (St. Louis, MO).
Dichloromethane (DCM), benzyl alcohol, acetonitrile, methanol, ethylene glycol,
potassium phosphate monobasic, and sodium azide were obtained from Fisher
Scientific Co. (Fair Lawn, NJ, USA). Poly(vinyl alcohol) (PVA) 40–88
(molecular weight ~205,000 g/mol) was purchased from Millipore Sigma
(Darmstadt, Germany). Sodium L-ascorbate and phosphate buffered saline Tween 20
(PBST) (pH 7.4) were purchased from Sigma Aldrich (St. Louis, MO).
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10

Synthesis and Characterization of Superparamagnetic Silica Colloids

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Superparamagnetic silica colloids in water with a diameter (specified by the manufacturer) of 0.51 μm ± 0.03 μm and iron oxide content ≥30% were purchased from microParticles GmbH (Berlin, Germany). Poly(ethylene oxide) (PEO, 600 kDa) was purchased from Sigma-Aldrich (St. Louis, MO, USA), sodium chloride (p.a.) from Merck (Kenilworth, NJ, USA) and sodium azide (≥99%) from Fisher Scientific (Hampton, NH, USA). All chemicals were used as received. All water used was purified by a Milli-Q water purification system.
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