The largest database of trusted experimental protocols

Flag antibody

Manufactured by Santa Cruz Biotechnology
Sourced in United States

The Flag antibody is a widely used tool in molecular biology and biochemistry research. It is a monoclonal antibody that specifically recognizes the Flag epitope tag, which is a short amino acid sequence (DYKDDDDK) that can be fused to recombinant proteins. The Flag antibody allows for the detection and purification of Flag-tagged proteins, facilitating various experimental applications.

Automatically generated - may contain errors

6 protocols using flag antibody

1

Myocardin-Stat3 Interaction Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Plasmid-based expression vectors encoding myc-tagged myocardin and flag-tagged Stat3 were cotransfected into cardiomyocytes. Lysates were collected 48 hours post-transfection. Then myc antibody (Santa Cruz) was used to precipitate myc-myocardin, and flag antibody (Santa Cruz) was used to precipitate flag-Stat3. The resulting mixture was washed, separated by SDS-PAGE, and transferred to an NC membrane (Pall). Samples were probed with myc antibody to visualize flag-epitope Stat3, stripped, and probed with flag antibody to visualize myc-epitope Myocardin.
+ Open protocol
+ Expand
2

Butyrate Modulates HIF-1α Acetylation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Butyrate (SIGMA, St Louis, CA, USA), sodium dichloroacetate (SIGMA), nicotinamide (SIGMA), rotenone (MERYER, Shanghai, China), TSA (CST, Danver, MA, USA), PDHA1α-phosphor-Ser293 Antibody (Novus Biologicals, Littleton, CO, USA), PDHA1α antibody (Abmart, Berkeley Heights, NJ, USA), Flag antibody (SIGMA), HA antibody (Santa Cruz, Santa Cruz, CA, USA) and the HIF-1α antibody (ABclone, Shanghai, China) were purchased. The pan-acetylation antibody was generated in-house.19 (link)
+ Open protocol
+ Expand
3

Immunoprecipitation of GFP Fusion Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were washed twice with PBS and lysed with IP lysis buffer (25 mM Tris-HCl, pH 7.4, 150 mM NaCl, 1% NP-40, 1 mM EDTA, 5% glycerol; Thermo Scientific 87787) supplemented with 20 mM N-ethylmaleimide (NEM) (Sigma-Aldrich E3876), 50 μM PR-619 (Sigma-Aldrich, 662141) and proteinase inhibitor cocktail (Roche 1183617001). Lysates were centrifuged at 4°C for 15 min at 20,000g. The supernatants were incubated with normal mouse IgG (Santa Cruz Biotechnology sc-2025), GFP antibody (Santa Cruz Biotechnology sc-9996), VCP antibody (Santa Cruz Biotechnology sc-57492), FLAG antibody (Santa Cruz Biotechnology sc-166355), or G3BP1 antibody (BD 611127) conjugated with protein A/G magnetic beads (Thermo Fisher Scientific 88803) at 4°C overnight. Beads were washed three times with wash buffer (50 mM Tris-HCl, pH 7.5, 500 mM NaCl, 0.05% Tween-20, 20 mM NEM and 50 μM PR-619) and treated with 0.1 M glycine pH 2.7 (Teknova G4527) at room temperature for 10 min to elute proteins. The resulting samples were analyzed by immunoblotting.
+ Open protocol
+ Expand
4

Flag-Tag Protein Immunoprecipitation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Transfected cells were lysed in cell lysis buffer (50 mM Tris-HCl pH 8.0, 150 mM NaCl, 1 mM EDTA, 1% NP40, 10% glycerol with protease inhibitor cocktail) for 1 h. Whole-cell extracts were collected and precleared. Beads coated with FLAG antibody (CST #2368), OCT4 antibody (sc-8628, Santa Cruz Biotechnology), and ZNF207 antibody (PA5-30641, ThermoFisher Scientific) were incubated with precleared whole-cell extracts at 4 °C overnight. The beads were washed with cell lysis buffer four times. Finally, the beads were boiled in 2x sample buffer for 10 min. The eluents were analyzed by Western blot.
+ Open protocol
+ Expand
5

Identification of miRNA-protein complexes

Check if the same lab product or an alternative is used in the 5 most similar protocols
A Flag-Ago2 expression construct was combined with mimic miRNAs of miR-105 or miR93-3p (TOOLS), transfected into 293 T cells and incubated for 48 hours. The cell lysates were harvested using RIPA buffer, containing protease inhibitors and RNase inhibitor. Flag antibody (Santa Cruz Technology, sc-9996) was pre-incubated with Protein G-agarose beads (EMD Millipore, 16-266) overnight at 4 °C and washed three times with IP wash buffer. The cell lysates were incubated with pre-conjugated antibodies overnight at 4 °C and washed three times with IP wash buffer. The pellet from immunoprecipitation was resolved in TRIsure reagent (BIOLINE, Taunton, MA, USA, BIO-38033) for RNA extraction and PCR.
+ Open protocol
+ Expand
6

ChIP Assay for Protein-DNA Interactions

Check if the same lab product or an alternative is used in the 5 most similar protocols
A ChIP assay was performed using a ChIP Assay Kit (Millipore) according to the manufacturer’s instructions. Briefly, LN-229 cells were cross-linked and lysed, and DNA was sheared into 200–800 bp fragments using sonication. Precleared chromatin was immunoprecipitated with a Flag antibody (Santa Cruz), and DNA was isolated after reverse cross-linking for quantitative real-time PCR (qRT-PCR). The relevant primer sequences are presented in Table S3 in the Supplemental Materials. ChIP analyses were then performed as previously described33 (link).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!