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13 protocols using nol lsm 710

1

Immunofluorescence Staining and Confocal Imaging

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The immunofluorescence staining was performed as previously described (55 (link)). Briefly, the EPC monolayers were infected with WT eseQ-2HA::kan strain, WT trx2-2HA::kan strain, and WT eseJ-2HA::kan strain at MOI 10. At 5 hpi, the EPC monolayers were fixed in 4% PFA and stained with rabbit anti-HA (Cell Signaling Technology) at 1:200, mouse anti-LPS at 1:200 (56 (link)), goat anti-rabbit IgG (Alexa 488; Molecular Probes) at 1:200, and goat anti-mouse IgG (Alexa 594; Molecular Probes) at 1:200 and sealed with anti-fading mounting reagent with DAPI before images were photographed under a confocal microscope (NOL-LSM 710; Carl Zeiss).
To determine the nucleus accumulation of p65, J774A.1 cells were infected with WT/RFP, Δtrx2/RFP, and Δtrx2[trx2]/RFP strains at MOI 10 for 2 hours. After fixation, the monolayers were stained with mouse anti-p65 (Cell Signaling Technology) at 1:200, and goat anti-mouse IgG (Alexa 594; Molecular Probes) at 1:200 and sealed with anti-fading mounting reagent with DAPI before images were photographed under a confocal microscope (NOL-LSM 710; Carl Zeiss).
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2

Nectin-4 Receptor Profiling in Cells

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Seed the cells in 35 mm plates (density: 1 × 104) for incubation overnight. Replace 1 mL serum-free medium containing Cy5 labeled mAbNectin-4 (20 µg/mL) to each plate and incubation was performed for 1 h. Rinse the Cy5-treated cells with pre-cooling PBS for three times, 200 μL 4% paraformaldehyde solution was added to fix cells. Then DAPI and FITC-Phalloidin was used for nuclear and cytoskeleton staining respectively. Images with different channels (Excitation/Emission of the Cy5, DAPI, and FITC were 650/670 nm, 360/450 nm, and 490/520 nm, respectively) were acquired by fluorescence optics of a confocal microscope (Zeiss, NOL-LSM 710). For blocking studies, MDA-MB-468 cells were incubated with excess mAbNectin-4 for 1 h previously before experiments.
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3

Developmental Stages of Inseminated Eggs

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The ovulated eggs of the maternal individual from strain F were inseminated by sperm of a genotypic male from strain A+, a temperature-dependent male from strain A+, and a male common carp, respectively. The fertilized eggs were digested by 0.25% trypsin to remove their shells and then incubated at 24°C. The fertilized eggs at different developmental stages were fixed with 4% paraformaldehyde in PBS at 4°C overnight on a working shaker. About 40 inseminated eggs were fixed at each time point as previously described (Zhang et al., 2015 (link)). After washing with PBS three times, the nuclei were stained using DAPI (Sigma, United States), and the images were obtained via confocal microscopy (NOL-LSM 710 Carl Zeiss) as described (Zhu et al., 2018 (link)).
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4

Nectin-4 Receptor Profiling in Cells

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Seed the cells in 35 mm plates (density: 1 × 104) for incubation overnight. Replace 1 mL serum-free medium containing Cy5 labeled mAbNectin-4 (20 µg/mL) to each plate and incubation was performed for 1 h. Rinse the Cy5-treated cells with pre-cooling PBS for three times, 200 μL 4% paraformaldehyde solution was added to fix cells. Then DAPI and FITC-Phalloidin was used for nuclear and cytoskeleton staining respectively. Images with different channels (Excitation/Emission of the Cy5, DAPI, and FITC were 650/670 nm, 360/450 nm, and 490/520 nm, respectively) were acquired by fluorescence optics of a confocal microscope (Zeiss, NOL-LSM 710). For blocking studies, MDA-MB-468 cells were incubated with excess mAbNectin-4 for 1 h previously before experiments.
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5

Nectin-4 Receptor Profiling in Cells

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Seed the cells in 35 mm plates (density: 1 × 104) for incubation overnight. Replace 1 mL serum-free medium containing Cy5 labeled mAbNectin-4 (20 µg/mL) to each plate and incubation was performed for 1 h. Rinse the Cy5-treated cells with pre-cooling PBS for three times, 200 μL 4% paraformaldehyde solution was added to fix cells. Then DAPI and FITC-Phalloidin was used for nuclear and cytoskeleton staining respectively. Images with different channels (Excitation/Emission of the Cy5, DAPI, and FITC were 650/670 nm, 360/450 nm, and 490/520 nm, respectively) were acquired by fluorescence optics of a confocal microscope (Zeiss, NOL-LSM 710). For blocking studies, MDA-MB-468 cells were incubated with excess mAbNectin-4 for 1 h previously before experiments.
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6

Interspecies Fertilization and Embryogenesis in Gibel Carp

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The ovulated eggs of the females from strain A+ in gibel carp were inseminated by sperms from males of GSD in strain A+, from males of TSD in strain A+, and from another species common carp. The fertilized eggs were digested by 0.25% trypsin to remove their shells and then incubated at 23 °C for cytological observations. The fertilized eggs of different developmental stage were fixed with 4% paraformaldehyde in PBS at 4 °C overnight. After washing with PBS three times, the nuclei were stained by DAPI, and the images were acquired under confocal microscopy (NOL-LSM 710 Carl Zeiss) as described [19 (link)].
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7

Immunofluorescence Staining of Embryos

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Embryos were fixed overnight in 4% PFA at 4 °C, then rinsed twice for 5 min in PBS and permeabilized in PBST(0.2% Triton X-100) at least 50 min at RT. After rinsing thrice for 5 min in PBS, embryos were incubated in blocking solution (1% BSA, 5% goat serum, 0.1% Triton X-100 in PBS) for at least 4 h prior to incubation with the primary antibody (1 : 1000 rabbit, Cell Signaling, Beverly, MA, USA). Following incubation at 4 °C overnight with gentle rocking and washing six times for 10 min with PBST(0.1% Triton X-100), embryos were incubated with secondary antibody-labeled Fluorescein (1 : 200 rabbit, Thermo, Pierce Antibody, Rockford, IL, USA) for at least 8 h at 4 °C with gentle rocking. Subsequently embryos were washed six times for 15 min in PBST, and then photographed on a confocal microscope (NOL-LSM 710, Carl Zeiss, Germany) as described.47 (link)
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8

BrdU Labeling of Fertilized Eggs

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BrdU (5-bromo-2-deoxy-uridine) dissolved in PBS with the concentration of 0.01 mg/ml was microinjected into eggs (1 nl each) within 10 min after fertilization. Then, the BrdU incorporation embryos were fixed in 4% formaldehyde, 0.25% glutaraldehyde, and 0.1% Triton X-100 in PBS at 4 °C overnight. After treating with 2 N HCl for 30 min, neutralization by 0.1 M sodium borate (pH = 8.5) and washing in PBST (PBS containing 0.1% Triton X-100), the embryos were subjected to immunofluorescence detection according to standard protocols. Mouse α-BrdU antibody was used as primary antibody, and Rhodamine conjugated goat anti-mouse IgG was used as secondary antibody. Images were acquired under confocal microscopy (NOL-LSM 710 Carl Zeiss) as described [19 (link)].
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9

Apoptosis Detection in Zebrafish Whole Mounts

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Apoptosis in zebrafish whole mounts was detected by TUNEL using In Situ Cell Death Detection Kit, Fluorescein (Roche) as described,14 (link) and then photographed on a confocal microscope (NOL-LSM 710, Carl Zeiss, Germany) as previously described.47 (link)
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10

Immunohistochemical Analysis of Retinal Development

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Section immunohistochemistry and whole-mount immunohistochemistry were performed as described previously 24 (link). Embryos were sectioned at 10 μm in thickness with frozen microtomy (Leica). The following primary antibodies were used: mouse monoclonal antibodies specific for Rhodopsin (1:500 dilution, Abcam), Arrestin3 (1:500 dilution, Abcam), phospho-histone H3 (1:1000 dilution, Cell Signaling), and active caspase3 (1:1000 dilution, BD Biosciences). Fluorescein conjugated goat anti-rabbit/mouse (Thermo) secondary antibodies were used at 1:200 dilution. Nuclei were stained with propidium iodide (PI, 10μg/ml, Sigma). Images were acquired by confocal microscopy (NOL-LSM 710, Carl Zeiss, Germany).
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