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8 protocols using acetone pa

1

Synthesis and Purification of AcPHCKRM Peptide

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Ac-Pro-His-Cys-Lys-Arg-Met-OH
(AcPHCKRM,
98%) was obtained from Peptide 2.0 Inc. (Chantilly, Virginia, USA).
Acetone p.a. was purchased from Merck (Darmstadt, Germany) and olive
oil from Apoteket AB (Gothenburg, Sweden). [Methyl-3H]thymidine
(2.0 Ci/mmol) was obtained from Perkin-Elmer Biosciences (Waltham
MA, USA). All starting materials and reagents were obtained from commercial
suppliers and were used without prior purification. Tetrahydrofuran
(THF) and CH2Cl2 used in reactions with anhydrous
conditions were distilled from Na and CaH2, respectively.
All reactions were monitored by thin-layer chromatography (TLC) on
silica-plated aluminum sheets (Silica gel 60 F254, E. Merck). Spots
were detected by UV light (254 or 365 nm), or developed with heating,
or anisaldehyde or potassium permanganate staining. All reactions
were carried out using magnetic stirring under an ambient atmosphere
if not otherwise noted. Microwave reactions were carried out using
a Biotage Initiator Sixty in 10–20 mL capped microwave vials
with fixed hold time, normal or high absorption, and 10–30
s pre-stirring. Purification by flash column chromatography was performed
using Merck silica gel Geduran Si 60 (0.063–0.200 mm) or by
using an automatic Biotage SP4 Flash+ instrument with pre-packed
columns (surface area 500 m2/g, porosity 60 Å, particle
size 40–63 μm).
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2

Synthesis and Characterization of Folic Acid-Functionalized Nanoparticles

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Acetone P.A 99.8%, chloroform P.A. 99.8%, dichloromethane P.A. 99.8% (DCM), dimethylformamide P.A 99.5%, dimethyl sulfoxide P.A 99.7%, ethanol P.A. 99.8% (EtOH), tetrahydrofuran P.A. 99.8% (THF), and toluene P.A. 99.0% were purchased from Merck (Rio de Janeiro, Brazil). The photoinitiator 2,2-dimethoxy-2-phenylacetophenone (DMPA) CAS:24650-42-8 was kindly donated by IGM resins (Valinhos, Brazil). Iron (III) chloride hexahydrate (FeCl3∙6H2O), iron (II) chloride tetrahydrate (FeCl∙4H2O), and ammonium hydroxide (NH4OH) were purchased from Vetec (Duque de caxias, Brazil). Folic acid (FA) 98%, 1-ethyl-3-(3-dimethyl aminopropyl) carbodiimide hydrochloride (EDC), N-Hydroxysuccinimide (NHS), methotrexate hydrate (MTX), fluorescein isothiocyanate (FITC), and enzyme Bromelain were purchased from Sigma-Aldrich (Cotia, Brazil). Cysteine hydrochloride 99.8% (Cys) was purchased from Gemini (Anápolis, Brazil). Novozym 435 (commercial lipase B from Candida Antarctica immobilized on cross-linked polyacrylate beads) was kindly donated by Novozymes, Brazil, A/S. Globalide (Gl) was a kind gift from Symrise (Cotia, Brazil), while ε-caprolactone (CL) was purchased from Sigma-Aldrich (Cotia, Brazil). Globalide and ε-caprolactone were dried under vacuum for 24 h and kept in a desiccator over silica and 4 Å molecular sieves. Water was purified by a Milli-Q water purification system.
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3

Immunohistochemical Analysis of Splenic Immune Markers

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Immunohistochemistry was based on the method reported by Morgado and collaborators[20 (link)]. Briefly, spleen fragments frozen in OCT resin (Sakura) were cut into 3–5 μm-thick sections and mounted onto microscope slides (silanized slides; DakoCytomation, Carpinteria, CA, USA). The slides were fixed in acetone PA (Merck, Darmstadt, Germany) and subjected to hydration, endogenous peroxidase blockage (peroxidase blocking reagent; Dako) and nonspecific staining blockage (0.4% BSA; Sigma, USA). The specimens were then incubated with primary antibodies directed against CD3+, CD4+, CD8+, CD21+, IFN-γ+, IL-10+ (Serotec), Ki-67+ (eBioscience), laminin, fibronectin, ADAM-10 (Abcam) or MMP-9 (Serotec), followed by incubation with the Labelled Polymer (Envision System-HRP, Dako). Aminoethyl carbazole (AEC kit; Invitrogen) was used as the substrate-chromogen system, and the slides were counterstained with Mayer’s hematoxylin (Sigma). The slides were examined under a light microscope (Zeiss), and the number of marked cells/mm2 tissue in the red pulp was determined. Two blinded readers evaluated the slides. Laminin and fibronectin deposits were quantified using ImageJ 1.48v software (NIH, USA), and the results are presented as the percentage of the marked area. Primary antibody suppression was used as the negative control reaction.
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4

Immunohistochemical Analysis of Splenic Tissue

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The splenic tissue was cryosectioned at a thickness of 5 μm, and the sections were placed on silanized slides (Dako, Carpinteria, CA, USA) and fixed with acetone P.A. (Merck) for 10 minutes. For the inhibition of non-specific binding, the sections were incubated in a solution containing 0.4% BSA for 20 minutes at room temperature. The excess blocking solution was discarded, and the primary antibodies for the detection of CD21 (Bio-Rad AbD Serotec), CTLA-4 and TIM-3 (Abcam) were added for 18 hours at 4 °C. The reaction was revealed by a secondary anti-mouse IgG antibody conjugated to phycoerythrin (PE-red) and an anti-rabbit IgG antibody conjugated to fluorescein isothiocyanate (FITC). The incubation with the secondary antibodies was performed in a dark room for 30 minutes at room temperature. The slides were assembled using Fluoromount-g medium containing DAPI (4′, 6-diamino-2-phenylindole) (Thermo Fisher Scientific), and the reaction was observed under a fluorescence microscope. The images were processed and overlaid with ImageJ software (NIH, USA).
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5

Algae Species Identification in Aquatic Ecosystems

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For algae species identification, water samples (300 mL each) were collected from the interface between the sand bed and supernatant water of each ecological filter, in triplicate before and at 96 hours after each spiking, totalling 396 samples. The collection time of 96 hours was chosen as it is the standard duration of algae toxicity tests (ABNT, 2011) and the aim was to assess the effect of PPCPs on algae and cyanobacteria species.
In addition to algae species, other water quality parameters were monitored on a weekly basis. Total phosphorus (TP) and total Kjeldahl nitrogen (TN) were monitored according to APHA (1995) . The pH was monitored using a pHmeter B374 -Micronal; Dissolved oxygen (DO) using an Oximeter YSI; water temperature (Temp) was monitored using an Orion -model 145.
Chlorophyll-a (Chl-a) was extracted according to Nusch (1980) , using glass microfiber filters (0.45 μm -Macherey-Nagel, Germany) and acetone PA (Merck -Darmstadt, Germany). After extraction, the samples remained in the dark for a minimum of 14 hours and then were analysed by spectrophotometry (UV-spectrophotometer 600, Femto), at 665 nm and 750 nm wavelengths. The concentration of Chl-a was calculated according to the equation described in Lorenzen (1967).
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6

Synthesis of Collagen-Hyaluronan Nanocomposite

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Collagen I (Col I, 0.7%, pH—4.5) supplied by Sanimed International Impex S.R.L. (Romania) was concentrated by adding lyophilizate to the appropriate concentration required in synthesis. Dimethylsilanediol hyaluronate (DMSHA, aqueous solution with 0.3% hyaluronan of 1.8–2.2 MDa and 0.3% dimethylsilanediol) was obtained from EXSIMOL S.A.M. (Monaco). Nano-hydroxyapatite surface coated with linear polyethylenimine (nHApLPEI, nanoparticles of 45.5 nm in length and an aspect ratio of 3.91, with a content of 4.5 wt.% LPEI relative to the inorganic material) and poly(ε-polycaprolactone) di-acrylate (PCL-diA, ~ 2.1 kDa) were synthesized before use, according to the literature [24 (link),34 (link)]. PCL-diA, obtained as an organic layer, was further purified by precipitation of its solution in dried methylene chloride (Merck) in cold hexane (Merck), dried under vacuum, and stored in a desiccator, in the dark, at 6 °C. Phosphate-buffered saline tablets (PBS, pH 7.4, Sigma Aldrich) and Milli Q ultrapure water were used. All other solvents (acetone p.a. and anhydrous dimethyl sulfoxide—DMSO) purchased from Sigma Aldrich were used as received.
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7

Topographic Characterization of Resin Composites

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In order to characterize the topographic aspect of both resin composites after 45
days of storage, three specimens of each experimental group used for the color change
evaluation were evaluated under scanning electron microscopy (SEM). For comparative
reasons, control groups (non-stored specimens) were also evaluated. In addition,
representative images of selected regions of both resin composites were obtained to
characterize the morphological aspects of the filler particles and the
distribution/packing. For this, three additional specimens of non-storage resin
composites were immersed into acetone p.a. (Ref. 32201, Sigma-Aldrich, St. Louis, MO,
USA) for 3 days in order to dissolve the organic matrix. All of the specimens
obtained, regardless of the preliminary process, were then dehydrated over silica gel
for 2 h, sputter-coated (40 mA for 120 s) with gold/palladium (SCD 050, Balzers,
Schaan, Liechtenstein), and then investigated by means of SEM (JSM 5600LV, JEOL,
Tokyo, Japan), under secondary electron mode, operating at 15 -25 kV.
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8

Wettability of Titanium Disc Surfaces

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Since the titanium implants placed on the femurs of the mice were too small to have their wettability calculated, the nanoscale surface was re-created on titanium discs measuring 20.0 mm x 1.0 mm (VULCANIUM Metals International, Northbrook, IL, USA). The samples were washed with acetone P.A. (Sigma-Aldrich®) using ultrasound for 5 minutes. Two drops of water in the amount of 0.5 to 0.75μL were placed on the sample and the contact angle (CA) was obtained for each drop using a Drop Shape Analyzer 4500 (Kruss) goniometer. Measurements were made in a laboratory atmosphere with approximately 60% humidity. The equipment connected to the One Attension software was responsible for measuring CA through the sessile drop method. The chamber coupled to the goniometer made 50 shots per second and the formed CA was calculated.
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