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6 protocols using ab192234

1

Immunofluorescence Assay of Syne1 in MC3T3-E1 Cells

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MC3T3-E1 cells were washed in PBS and fixed in 4% paraformaldehyde for 15 min. Cells were permeabilized with Triton X-100 (0.025%) for 10 min, blocked in 1% goat serum for 1 h and probed with primary antibody anti-Syne1 (1:100; ab192234, Abcam) at 4 °C overnight. Cells were washed and labeled with FITC-conjugated secondary antibody (ab8211, Abcam) for 1 h. Nuclei were stained with DAPI for 10 min and imaged on a confocal microscope (FV1000, Olympus, Japan).
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2

Immunostaining of Muscle Fiber Nuclei

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Fibers were PFA-fixed and Triton-permeabilized as described above (Nuclear organization of single fibers). Fibers were treated with mouse-on-mouse block (Vector Laboratories, BMK-2202) for 1 hour, blocked in 10% goat serum in PBS (Sigma-Aldrich, G9023) for 30 minutes, and treated with primary antibodies diluted in goat serum blocking buffer. Prelamin A was visualized using as primary antibody Santa Cruz Biotechnology Inc. sc-6214, c-20 (secondary antibody: Alexa Fluor 488, Invitrogen, A-11078) and Pax7 using Developmental Studies Hybridoma Bank (DSHB) AB 528428 as primary antibody (secondary antibody: Alexa Fluor 488, Invitrogen, A-11001). Lamin A (Abcam, ab8980) and nesprin-1 (Abcam, ab192234) were matched with Alexa Fluor 488 and 594, respectively (Invitrogen, A-11001 and A-11012). Acetyl-histone H3 (Lys9/Lys14) antibody (Cell Signaling Technology, 9677) matched with Alexa Fluor 594, respectively (Invitrogen, A-11012).
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3

Co-Immunoprecipitation of Nuclear Envelope Proteins

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Co‐immunoprecipitation was performed as described previously.27, 28, 30, 31 Cell lysates were mixed with protein A/G‐magnetic beads (Novex, Oslo, Norway) and incubated at 4°C overnight with the selected antibodies. The beads were washed using Western/IP lysis buffer (Beyotime, Haimen, China, composition: 20 mM Tris [pH 7.5], 150 mM NaCl, 1% Triton X‐100, and inhibitors containing sodium pyrophosphate, β‐glycerophosphate, EDTA, Na3VO4 and leupeptin), and eluted using the Acid Elution buffer (Beyotime). Next, total protein amount of each group was measured by BCA protein quantification. After the first quantification, the samples were diluted according to the difference in protein amount, and the second quantification was carried out for confirmation. Finally, the samples were suspended in SDS‐PAGE loading buffer and then measured by IB. The antibodies used for co‐IP were as follows: anti‐FLAG (CST, #14793 and #8146), anti‐PDHA (Abcam, #ab168379 and #ab110330), anti‐HA (Abcam, #ab9110 and #ab1424), anti‐EMD (Abcam, #ab40688 and #ab204987), anti‐Lamin A (Abcam, #ab226198), anti‐Nesprin1 (Abcam, #ab192234), anti‐Nesprin3 (Abcam, #ab186746), anti‐Sun1 (Abcam, #ab124770) and anti‐Sun2 (Abcam, #ab124916).
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4

Western Blot Analysis of Apoptosis Markers

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Tissues were lysed in RIPA buffer containing protease inhibitors. Proteins were resolved on 12.5% SDS-PAGE gels and transferred to PVDF membranes. Membranes were blocked in 5% non-fat milk at 37 °C for 2 h and probed with anti-Bcl-2 (ab32124, Abcam), anti-Bax (ab32503, Abcam), anti-cleaved-caspase-3 (ab32042, Abcam), and anti-Syne1 (ab192234, Abcam) primary antibodies (1:1000 dilution) overnight at 4 °C. β-actin was probed as a loading control. Membranes were washed and labeled with HRP-conjugated secondary antibodies. Blots were imaged using ECL advance western blotting reagent for chemiluminescence detection.
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5

Immunofluorescence Localization of Cellular Markers

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The cells were fixed in 4% PFA for 15 min. After washing three times in PBS, the cells were incubated with 3% BSA for 1 h. Cells were immunostained with primary antibodies against EPOR (rabbit, orb164257; Biorbyt, 1:100), anti‐βCR (mouse, 393,281; Santa, 1:100), anti‐H3K9 (mouse, 5327; CST, 1: 100), and anti‐Syne‐1 (rabbit, ab192234; Abcam, 1:100). After incubation with secondary antibodies conjugated with DyLight 488 or Cy3 (Jackson ImmunoResearch), the cells were counterstained with 4′,6‐diamidino‐2‐phenylindole. The images were digitized using an Olympus Fluoview FV1000 microscope (Olympus).
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6

Immunoprecipitation of Nesprin-1 in B Cells

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Immunoprecipitation was performed as previously described by (35 (link)), adapted to B cells. 10 x106 B cells (in resting conditions or activated for different times point) were incubated with IP buffer (10 mM Hepes, pH 7.4, 10 mM KCl, 5 mM EDTA, 1% Triton X-100 and protease inhibitor cocktail), sonicated on ice and then centrifuged at 16,000 g for 15 min at 4°C. Lysates were then precleared with protein A agarose beads (Roche). IPs with rabbit- anti-Nesprin-1 (abcam ab192234) and non-specific rabbit IgG (4 µg antibody/500 µg of B cell lysates) were performed at 4°C overnight, followed by incubation with protein A agarose beads at 4°C for 2 h and centrifugation at 4,000 g for 10 min. Samples were washed, resuspended in loading buffer 3x, boiled, and loaded onto a 8% SDS-PAGE gel.
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