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227 protocols using l tyrosine

1

Purification and Characterization of Dr-Nb(III)

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Dr-Nb(III) was cloned, expressed, and purified as already reported [52 (link)]. The Dr-Nb(III) concentration was determined spectrophotometrically by measuring the absorbance at 407 nm (ε = 1.57 × 105 M−1 cm−1) [52 (link)]. Apo-Dr-Nb was prepared, as already reported [53 ]. Peroxynitrite was obtained from Cayman Chemical (Ann Arbor, MI, USA). The concentration of Peroxynitrite was determined spectrophotometrically at 302 nm (ε = 1.705 × 103 M−1 cm−1) [12 (link)]. L-tyrosine (obtained from Merck KGaA, Darmstadt, Germany) was dissolved in 5.0 × 10−2 M Bis-Tris propane buffer, at pH 7.0 and 22.0 °C; the final L-tyrosine concentration was 1.0 × 10−4 M [25 (link),30 (link),36 (link),39 (link)]. All the other chemicals were purchased from Merck KGaA (Darmstadt, Germany). All chemicals were of analytical grade and were used without further purification.
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2

Zein Solubilization Assay Protocol

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A mixture consisting of 9 ml assay buffer (50 mM Tris HCl pH 8.5, 50 mM NaCl, 10% glycerol (v/v)), 1 ml of cell lysate, and 0.3 g zein from maize (Sigma-Aldrich, USA) was prepared in 15 ml polyethylene (PE) round-bottom tubes. The tubes were vortexed in order to resuspend the zein powder and incubated at 20 and 50 °C under constant mixing on a wheel for 48 h. Three replicates per samples were run in parallel. Hydrolysis and solubilization of zein was monitored by detection of TCA-soluble peptides. Standard curve was made with 0–5.5 mM L-tyrosine (Sigma-Aldrich, USA). Soluble L-tyrosine and L-tryptophan containing zein peptides specifically react with Folin-Ciocalteu reagent (Sigma-Aldrich, USA) to produce a color change with a maximum absorbance at 660 nm. The tubes were centrifuged at 12,000×g for 10 min in order to pellet insoluble proteins. Samples were taken avoiding the top carotenoid-rich layer and further diluted in order to fit within the standard curve range. Measurements were done in triplicate in a Hidex Sense microplate reader (Hidex, Finland).
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3

Phenoloxidase Activity in Haemolymph

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Both the acellular fraction and the haemocyte lysate were subjected to a similar analysis of PO. Three substrates specific for PO enzymes were tested: (i) L-tyrosine (monophenol; Sigma-Aldrich) metabolized by tyrosinase only; (ii) L-DOPA (o-diphenol; Sigma-Aldrich) metabolized by the enzymes catecholase, tyrosinase and laccase; and (iii) p-phenylenediamine (PPD; p-diamine; Sigma-Aldrich) metabolized by laccase only [15 (link)].
We used 10 mM of L-DOPA (3-4-dihydroxy-L-phenyl-alkaline) (D9628, Sigma-Aldrich), L-tyrosine (CAS number 60-18-4, Sigma-Aldrich), and PPD (CAS number 106-50-3, Sigma-Aldrich) diluted in PBS immediately before the experiment to avoid oxidation.
One-hundred microlitres of cell-free haemolymph, 50 μl of substrate solution, and 50 μl of PBS (total volume of 200 μl) were added to each well into a 96-well microtiter plate. As controls, we used 50 μl of substrate solution with 150 μl PBS. For each treatment, we tested samples, controls, and blanks (200 μl of PBS) in triplicate.
The reaction kinetics were measured for 2 h. Readings were performed every 20 s at 28 °C in a microplate reader (VersaMax Tunable Microplate reader, Molecular Devices, Sunnyvale, CA), using λ = 490 nm for L-tyrosine and L-DOPA, and λ = 465 nm for PPD. The results were plotted using the maximum reaction speed (i.e. the increase in the absorbance/min), according to Alves et al. [29 (link)].
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4

Tyrosinase Inhibition Assay for Probiotic Metabolites

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Tyrosinase inhibition assays were performed using L-tyrosine (Sigma, St. Louis, MO, USA) and L-DOPA (Sigma) as substrates for monophenolase and diphenolase, respectively, as previously reported (Noh et al., 2020 (link)) with slight modifications. The reaction mixture (140 μL) contained 110 μL of phosphate buffer (0.1 M, pH 6.5), 1 μL of mushroom tyrosinase (25,000 U mL−1, Sigma) and 20 μL of 5 mM L-tyrosine or L-DOPA with probiotic culture supernatant (final 10 and 20%, v/v). Reaction mixtures were monitored at 475 and 490 nm for dopachrome formation. All measurements were made in triplicate. To assay the tyrosinase inhibitory effects of individual metabolic compounds, candidate inhibitors (alanine, leucine, methionine, phenylalanine, threonine, valine, pipecolic acid, or phenyllactic acid; Sigma) were added to reaction mixtures at concentrations of 10 or 20 mM. Tyrosinase activities (%) were calculated by expressing supernatant absorbance as a percentage of the absorbance of vehicle controls.
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5

Anti-tyrosinase Activity Assay of Edible Bird's Nest

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The assay was based on the formation of L-dopachrome by the action of mushroom tyrosinase enzyme on its substrate, l-tyrosine (Sigma-Aldrich, Germany) [35 (link)]. An aliquot of 10 μL of tyrosinase (250 U/mL, Sigma-Aldrich, Germany) was supplemented to the wells of a 96-well plate containing 60 μL of diluted unhydrolyzed EBN, HPJ, HPP, HAJ, HBM, and HCJ from the hydrolysis at 0 and 4 h at the initial EBN concentrations of 0.0325, 0.075, 0.15, 0.3, and 0.6 mg/mL. This step was followed by the incubation of the plate at room temperature for 20 min and the addition of 140 μL of l-tyrosine (0.3 mg/mL) in phosphate buffer (pH 6.8). The absorbance of L-dopachrome at 480 nm was monitored in a microplate reader (VICTOR Nivo Filter, PerkinElmer, USA). The anti-tyrosinase ability of the samples was calculated as follows: Where.

B1: Absorbance of l-tyrosine (negative control)

B2: Absorbance of the sample after reacting with tyrosinase

B3 and B4: Absorbance of the blank for the negative control and sample, respectively.

The IC50 value of sample for the anti-tyrosinase capacity was calculated by GraphPad Prism software (version 5.0, Insightful Science LLC, USA).

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6

Synthetic Complete Medium Preparation

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A total of 1.7 g yeast basic nitrogen source (YNB without amino acids and ammonium sulfate, BD), 5 g ammonium sulfate (VETECTM, Merck), 20 g d-glucose, 0.1 g l-arginine, 0.1 g l-cysteine, 0.1 g l-lysine, 0.1 g l-threonine, 0.05 g l-aspartic acid, 0.05 g l-Isoleucine, 0.05 g l-phenylalanine, 0.05 g l-proline, 0.05 g l-serine, 0.05 g l-tyrosine, 0.05 g l-valine, 0.05 g l-methionine, 0.1 g l-tryptophan, 0.05 g l-histidine, 0.1 g l-uracil, 0.1 g l-leucine, 0.1 g l-adenine were added to 1 L deionized H2O. All amino acids were purchased from Sigma-Aldrich. After autoclaving for 45 min, the SC medium was stored at room temperature. In all, 2% (m/v) glucose was supplemented to the medium before use.
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7

Spectroscopic Analysis of Organic Compounds

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Melting points were taken on a Barnstead Electrothermal 9200. IR spectra were measured on a Shimadzu Prestige-21 (200 VCE) spectrometer. 1H and 13C NMR spectra were measured on a Varian Infinity Plus spectrometer at 300 and 75 Hz, respectively. 1H and 13C chemical shifts are referenced to the internal deuterated solvent. Mass spectra were obtained using MICROMASS Quattro LC-MS-MS spectrometer. Solvents were dried following standard methods. Sepharose 4B, L-tyrosine, sulfonamide, synthetic starting material, reagents, and solvents were purchased from Merck, Alfa Easer, Sigma-Aldrich, and Fluka.
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8

Biochemical Precursor Sourcing

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2‐HPA, 3‐HPA, 4‐HPA, l‐phenylalanine and homogentisic acid were purchased from Sigma‐Aldrich (Steinheim, Germany). PA, l‐tyrosine, d(‐)‐fructose and l(+)‐arabinose were purchased from Merck (Darmstadt, Germany).
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9

Tyrosinase Inhibition and Antioxidant Assays

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Absolute ethanol, acetone-d6, α-arbutin, chloroform-d, dimethyl sulfoxide (DMSO), disodium dihydrogen phosphate monohydrate, l-DOPA, DPPH, Folin–Ciocalteu’s reagent, kojic acid, sodium dihydrogen phosphate monohydrate, l-tyrosine, and sulfuric acid were purchased from Merck (Darmstadt, Germany). Mushroom tyrosinase and Trolox were purchased from Sigma-Aldrich (St. Louis, MO, USA).
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10

Melanin Biosynthesis Inhibition Assay

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Malt extract agar (2% malt extract, 2% D-glucose, 0.1% bacto-peptone and 2% agar) plates with 50 mg/L tricylazole (LGC Standards, United Kingdom, Li et al., 2016 (link)) were inoculated with the wild-type and the mutant strains and incubated at 37°C for 10 days. The tricyclazole served as inhibitor of the pentaketide melanin biosynthesis (DHN pathway) (Franzen et al., 2006 (link)). Using a minimal medium (15.0 mM glucose, 10.0 mM MgSO4, 29.4 mM KH2PO4, 13.0 mM glycine, and 3.0 μM thiamin) the mutant and wild-type were also inoculated in liquid cultures with 1 mM L-Dopa (L-Dopa, Merck, Germany) or 1 mM L-tyrosine (Merck, Germany, Paolo et al., 2006 (link)). The cultures were kept in the dark to withstand autopolymerisation of L-Dopa at 37°C for 10 days.
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