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7 protocols using aicar

1

Polarization of Bone Marrow-Derived Macrophages

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BMMФ were stimulated either with IL-4 (10 ng/ml, AF-214-14, Peprotech), lipopolysaccharide (100 ng/ml, Sigma) or dexamethasone (100nM, D4902, Sigma) to respectively achieve M(IL-4), M(LPS) or M(GC) polarization state. In some experiments, BMMФ were treated with C75 (Sigma), Cerulenin (Sigma), Etomoxir (Sigma), pan-AKT inhibitor MK-2206 (1 mM, Cayman Chemical), 25-hydroxycholesterol (10 μM, Cayman chemical), N-acetyl cysteine (10mM, Sigma), Diphenyleneiodonium chloride (DPI, 5 μM, Sigma), L-NG-Nitroarginine methyl ester (L-NAME, 1mM, Cayman Chemical), Allopurinol (100 μM, Sigma), hydrogen peroxide (Sigma), SIRT1 activator II (Sigma), EX-527 (Sigma), Compound C (Sigma), AICAR (Abcam), HMGCoA (Sigma), water-soluble cholesterol (Cholesterol–methyl-β-cyclodextrin, Sigma) or Simvastatin (Sigma).
For fatty acid treatment, palmitic or oleic acid (Cayman) were solubilized at 100mM in absolute ethanol at 60°C. Fatty acid were conjugated at the desired concentration using a sonicator water bath into the macrophage culture medium to avoid endotoxin contamination from BSA54 (link).
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2

Neuromuscular Coculture and IGF-1 Effects

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The SKM cell cultures and sensory innervation cultures were treated as follows: (1) SKM group: The SKM cells were cultured for 2 days with SKM medium, and the culture continued for another 4 days with coculture medium; (2) SKM + DRG group: SKM cells were cultured for 2 days and were then cocultured for another 4 days with DRG explants; (3) SKM + IGF-1 group: The SKM cells were cultured for 2 days with SKM medium, 2 days with coculture medium, and another 2 days with coculture medium containing IGF-1 (20 nmol/L); and (4) Coculture + IGF-1 group: The SKM cells were cultured for 2 days in SKM medium and another 4 days with coculture medium with DRG explants; IGF-1 (20 nmol/L) was applied in the last 2 days. After processing for the live monitoring of mitochondrial morphology, real-time PCR and Western blot assays of the SKM cells, the SKM + DRG + IGF-1 group was treated with either the PI3K inhibitor LY294002 (10 μmol/L, Invitrogen), Mul1 overexpression lentivirus, or the AMPKα activator AICAR (1 mmol/L, Abcam) for further exploration of the mechanisms underlying the effects of IGF-1 on SKM cells in neuromuscular cocultures.
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3

AICAR Modulates TGF-β1-Induced Corneal Fibrosis

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In vitro analyses were performed by directly stimulating primary corneal fibroblasts with TGF-β1 to induce fibrosis. The fibroblasts were seeded into culture plates and allowed to attach. The cells were pretreated with 0.5-mM and 1-mM AICAR (Abcam, Cambridge, UK) dissolved in dimethyl sulfoxide for 2 to 3 hours followed by 5 ng/mL TGF-β1 (PeproTech, Seoul, Korea) and then incubated. To determine if the observed effects were AMP-activated protein kinase (AMPK) dependent, the cells were pretreated for 2 hours with 2.5-µM and 5-µM Compound C (Merck, Darmstadt, Germany), an AMPK antagonist, followed by 1-mM AICAR for 2 hours and then 5-ng/mL TGF-β1, and then incubated. The incubation periods were 8 hours for the detection of signaling proteins and 48 hours for the detection of ECM proteins.
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4

Polarization of Bone Marrow-Derived Macrophages

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BMMФ were stimulated either with IL-4 (10 ng/ml, AF-214-14, Peprotech), lipopolysaccharide (100 ng/ml, Sigma) or dexamethasone (100nM, D4902, Sigma) to respectively achieve M(IL-4), M(LPS) or M(GC) polarization state. In some experiments, BMMФ were treated with C75 (Sigma), Cerulenin (Sigma), Etomoxir (Sigma), pan-AKT inhibitor MK-2206 (1 mM, Cayman Chemical), 25-hydroxycholesterol (10 μM, Cayman chemical), N-acetyl cysteine (10mM, Sigma), Diphenyleneiodonium chloride (DPI, 5 μM, Sigma), L-NG-Nitroarginine methyl ester (L-NAME, 1mM, Cayman Chemical), Allopurinol (100 μM, Sigma), hydrogen peroxide (Sigma), SIRT1 activator II (Sigma), EX-527 (Sigma), Compound C (Sigma), AICAR (Abcam), HMGCoA (Sigma), water-soluble cholesterol (Cholesterol–methyl-β-cyclodextrin, Sigma) or Simvastatin (Sigma).
For fatty acid treatment, palmitic or oleic acid (Cayman) were solubilized at 100mM in absolute ethanol at 60°C. Fatty acid were conjugated at the desired concentration using a sonicator water bath into the macrophage culture medium to avoid endotoxin contamination from BSA54 (link).
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5

Pharmacological Modulators of Neuronal Signaling

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Cells were treated before collection or imaging with AICAR (1 mM, 2 h, Abcam), CC (20 µM, 2 h, Abcam), AKT inhibitor VIII (10 µM, 2 h, TCI), GSK1904529A (1 µM, 2 h, Abcam), Wortmannin (1 µM, 2 h, EMD Millipore), CCCP (20 µM, 2 h, Sigma-Aldrich, insulin (500 nM, 1 h, Sigma-Aldrich), Torin-2 (10 nM, 30 min, Sigma-Alrich), AA (5 nM or 20 µM, 45 min, Alfa Aesar), ApoE3 or E4 (50 nM, overnight, PeproTech). The compounds were either dissolved in water (AICAR, CC, insulin, ApoE3 and E4), in dimethylsulfoxide (DMSO; AKT inhibitor VIII, GSK1904529A; Wortmannin, CCCP and Torin-2) or ethanol (AA). For compounds dissolved in DMSO or ethanol, control samples were treated with the same amount of the respective solvent. For insulin starvation, neurons were cultured for 2 h or overnight in NB + B27 + PSG lacking insulin.
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6

AICAR Preparation and Administration

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AICAR was obtained from Abcam (Cambridge, UK) (ab120358, Lot: APN12423-1-1;) for cell experiments, and LC Laboratories (Woburn, MA, USA) (A-1098, Lot: ACR-101) for animal experiments. AICAR was dissolved in distilled water and immediately stored at −20°C. This stock solution was diluted in culture medium for in vitro or saline for in vivo experiments, immediately before use.
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7

AICAR Mimics Exercise in HLMVEC

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HLMVEC were treated with 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR; Abcam) to mimic the effect of exercise. AICAR is a cell-permeable activator of AMP-activated protein kinase (AMPK). Before stretching, HLMVEC were treated with AICAR (10 mM) for 24 h to simulate exercise.
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