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25 protocols using mda mb 231

1

Culturing Cell Lines for Experiments

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The utilized cell lines (HeLa, MDA-MB-231, MCF-7, and NIH/3T3) were obtained from ECACC (European Collection of Cell Cultures, Salisbury, UK), except for SiHa cells which were obtained from ATCC (American Tissue Culture Collection, Manassas, VA, USA). All cell lines were cultured in Eagle’s Minimum Essential Medium (EMEM) at 37 °C in a humidified atmosphere with 5% carbon dioxide. The medium was supplemented with 10% fetal bovine serum (FBS), 1% non-essential amino acid solution, and 1% penicillin, streptomycin, and amphotericin B mixture. All cell culture mediums and supplements were obtained from Lonza Group Ltd. (Basel, Switzerland). Chemicals for the described in vitro experiments were purchased from Merck Ltd. (Budapest, Hungary) unless stated otherwise.
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2

Culturing Cancer Cells with Blood

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A human breast-cancer cell line (MDA-MB 231) and colon-cancer cell line (HCT-116) were obtained from the European Collection of Cell Cultures (ECACC-HPA cultures, Salisbury, UK). Cells were cultured in 75 cm2 flasks (5520200, Orange Scientific) at 37 °C in a 5% CO2 atmosphere, in the recommended media supplemented with the appropriate amount of heat-inactivated fetal bovine serum (10106-169, Invitrogen, NY, USA) and 2 mM l-glutamine (G5792, Sigma-Aldrich, Munich, Germany). Approximately, 3,750,000 cells were isolated and divided into five 15 ml Falcon tubes each containing 1.5 ml of blood from healthy individuals, with EDTA anticoagulant (with a total of ~ 750,000 cancer cells in each tube).
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3

Breast Cancer Cell Line Collection

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Oestrogen receptor(ER)-positive (MCF-7, ZR-75-1 and T47D), triple-negative (MDA-MB-231, HCC 1806), and ER-negative/HER2-positive (SK-BR-3) human breast carcinoma cell lines and MCF-10A, a non-malignant immortalised mammary cell line, were purchased from European Collection of Cell Cultures (Wiltshire, UK). HMEC, primary human mammary epithelial cells were purchased from Life Technologies (Carlsbad, CA). HEK-293FT cells were purchased from Invitrogen (Carlsbad, CA) as a part of BLOCK-iT Lentiviral RNAi Expression System. HEK293-T cells were obtained from DSMZ (Germany), as reported previously.7 (link) See Supplementary Methods for culturing conditions.
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4

Cultivating Human Breast Cancer Cell Lines

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The MCF-7 and MDA-MB-231 human breast adenocarcinoma cell lines and T47D human ductal breast carcinoma cell line were purchased from the European Collection of Cell Cultures (ECACC). The cells were cultured in Dulbecco’s modified Eagle’s medium with (MDA-MB-231) or without (MCF-7 and T47D) phenol red (DMEM, Lonza, Belgium), supplemented with 10% heat-inactivated fetal bovine serum (FBS; Lonza), 4 mM L-glutamine (Lonza), 1% penicillin/streptomycin solution (Lonza) and 10 mM HEPES buffer (Sigma, Germany). The medium without phenol red was used for the two cells lines expressing the estrogen receptor (i.e., MCF-7 and T47D) due to the potential influence of phenol red on estrogen signaling [40] (link). The cells were cultured in 75 cm2 tissue culture flasks (TPP, Switzerland) at 37°C in a humidified atmosphere containing 5% CO2. Sub-confluent cells were sub-cultured every 3–4 days. For proliferation experiments, the cells were seeded in 96-well plates (TPP) at a density of 5,000 cells/well 24 h prior to the addition of each agent or their combinations. For flow cytometric analyses, the MCF-7 cells were seeded in 60-mm Petri dishes (TPP) at a density of 210,000 cells/well. For microscopic assessments, the MCF-7 cells were seeded in 12-well plates (TPP) at a density of 35,000 cells/well.
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5

Breast Cancer Cell Line Cultivation and Treatment

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The human breast carcinoma cell lines MCF-7 (expressing ERα and wild-type p53) and MDA-MB-231 [ERα-negative, bearing mutated p53 (R280K)] were obtained from the European Collection of Cell Cultures (ECACC) and maintained in Dulbecco's modified Eagle's medium (DMEM) (Sigma-Aldrich; Merck KGaA) supplemented with 10% fetal bovine serum (FBS; Gibco; Thermo Fisher Scientific, Inc.) and 1% penicillin/streptomycin (Lonza Group, Ltd.) at 37°C in a humidified atmosphere containing 5% CO2 until they reached 70% confluency. Where indicated, cells were treated with 10 ng/ml IFN-γ (Sigma-Aldrich; Merck KGaA) for 24 h or 10 µM etoposide (ETO) for 24 h (Sigma-Aldrich; Merck KGaA).
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6

Regulation of MDA-MB-231 Breast Cancer Cells by miR-449

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Human breast epithelial MCF-10 and breast cancer MDA-MB-231 cell lines were obtained from the European Collection of cell cultures (Wiltshire, UK). These cells were cultured in the DMEM (Dulbecco’s modified Eagle’s medium; Gibco, USA) containing 10% FBS (fetal bovine serum), 100 U/ml penicillin, and streptomycin (Gibco) at 37°C in an incubator with 5% CO2. Cells (5 × 105) were seeded in six-well plates and continued to culture for 24 h before transfection. The miR-449 mimics, miR-449 inhibitor, negative scramble RNA, and TPD52-siRNA, which were synthesized by Sangon Biotech (Shanghai, P.R. China), were transfected into cells by Lipofectamine 2000 (Invitrogen Inc., Carlsbad, CA, USA) in accordance with the manufacturer’s instructions. After transfection, the expression of miR-449 was determined by quantitative real-time polymerase chain reaction (qRT-PCR) analysis.
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7

Culturing Gynecological Cancer Cell Lines

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The human gynecological cancer cell lines isolated from breast cancers (MCF7 and MDA-MB-231), and cervical adenocarcinoma (HeLa) were obtained from The European Collection of Cell Cultures, Salisbury, U.K., while the cervical carcinoma (SiHa) was purchased from the American Type Tissue Culture Collection, Manassas, Virginia, USA. All the cells were maintained in Minimum Essential Medium that was supplemented with 10% fetal bovine serum, 1% non-essential amino acids, and 1% penicillin-streptomycin at 37 °C in a humidified atmosphere condition. All media and supplements were purchased from Lonza Group Ltd. (Basel, Switzerland).
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8

Cultivation of Gynecological and Glioblastoma Cell Lines

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Human gynecological cancer cell lines
(MDA-MB-231, MCF-7, and HeLa) and the human glioblastoma U-87 MG cell
line were purchased from the ECACC (European Collection of Cell Cultures,
Salisbury, UK). Cells were grown in Eagle’s Modified Essential
Medium supplemented with 10% heat-inactivated fetal bovine serum,
1% nonessential amino acids, and 1% penicillin–streptomycin–amphotericin
B mixture in a humidified atmosphere containing 5% CO2 at
37 °C. To maintain the U-87 MG cell line, the basic medium was
supplemented with 1% l-glutamine and 1% sodium pyruvate.
All media and supplements were obtained from Capricorn Scientific
Ltd. (Ebsdorfergrund, Germany). Cells in the near-confluent phase
of growth were used for the assays described below.
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9

Culturing Human Breast Cancer Cells

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As a model in vitro system for cellular experiments we chosen two human breast cancer cell lines MCF-7 and MDA-MB-231 (purchased from the European Collection of Cell Cultures and American Type Culture Collection, respectively). Cells were cultured in a cell growth medium (DMEM), supplemented with 10% (v/v) fetal bovine serum, 100 U/mL penicillin and 100 µg/mL streptomycin (all from Gibco, Thermo Fisher Scientific, Waltham, MA, USA). Cells were maintained at 37 °C in a humidified atmosphere containing 5% of CO2. The cells were routinely subcultured 2–3 times a week in 25 cm2 cells’ culture flasks.
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10

Sulforaphane Effects on Breast Cancer Cells

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Breast cancer cell lines MCF7, MDA-MB-231, and MCF10A were obtained from the European Collection of Cell Cultures. The cells were cultured in standard conditions: density up to 70% confluence, 5% CO2, and 95% air, in DMEM with proper supplements indicated previously. After a 24 h pre-incubation period, the cells were treated with R-SFN at the doses of 5 μM (for all cell lines), 10 μM (for MCF10A cells), or 20 μM (for MCF7 and MDA-MB-231 cells), which were selected based on cytotoxicity assay [8 (link)]. The incubation was continued for the subsequent 72 h. Simultaneously, control cells were treated with DMSO (vehicle) at the concentration not exceeding 0.1%.
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