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7 protocols using pd166866

1

Screening Drugs on C. elegans in 96-well Plates

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Treating compounds to C. elegans using 96-well plates was followed as the previous method for drug treatment [21 (link)]. The synchronized L1 larvae on the normal NGM plate with cholesterol were harvested using M9 buffer and washed 3 times, then transferred to each well of the 96-well plate. The final culture volume was adjusted to 100 µl and worm numbers were between 50–100 per well. OP50 E. coli was cultured at 37 °C, harvested, washed 2 times with distilled water, and kept at 4 °C. L1 larvae cultured on the 96-well plate were incubated for 3 days at 22 °C and transferred to NGM plates. Counting Muv was performed using a dissecting microscope after 24 hours of recovery. BGJ398 (S2183, Selleck Chemicals LLC, Houston, TX, USA) and PD166866 (S8493, Selleck Chemicals LLC), and U0126 (036M4607V, Sigma, St. Louis, MO, USA) were used. These experiments were repeated more than 3 times and p-value to the control (* p < 0.05, ** p < 0.01, and *** p < 0.001) was calculated by t-test.
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2

FGFR1 Inhibition Promotes Neurogenesis

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The selective FGFR1 inhibitor PD166866 (Selleckchem), was used to block FGFR1 activity (Yamashita-Sugahara et al., 2016 (link); Yi et al., 2020 (link)). 10 µM (i.e. 3.96 µg/ml) of PD166866 was used together with 100 ng/ml FGF8 between days 11 and 21 of the differentiation protocol. At day 21, culture medium was replaced with N2B27 containing 20 µM DAPT for 5 days with medium being refreshed every other day (see the illustration of the PD166866-treatment strategy in Fig. 4A).
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3

Cytokine Modulating Compounds Protocol

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Bortezomib, ixazomib, GSK650394, and PD166866 were purchased from SelleckChem (Houston, TX, USA). A C-C chemokine receptor type 2 (CCR2) antagonist was obtained from Santa Cruz Biotechnology (Dallas, TX, USA). Dimethyl fumarate (DMF) was purchased from FUJIFILM Wako (Tokyo, Japan). These reagents were dissolved in dimethyl sulfoxide (DMSO) and diluted in phosphate-buffered saline (0.05 M, pH 7.4).
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4

Targeting Oncogenic Signaling Pathways in Breast Cancer

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The drugs listed below were acquired from Selleck chem: FGFR inhibitors PD166866 (specific to FGFR1), Alofanib (targeting FGFR2), H3B-6527 (inhibiting FGFR4), and AZD4547 (effective against FGFR1-3), pan-FGFR inhibitor TAS-120, JAK inhibitors Solcitinib (inhibiting JAK1) and AZD1480 (inhibiting JAK2), UC2288 (p21 inhibitor), STAT inhibitors Fludarabine (inhibiting STAT1),
Stattic (inhibiting STAT3) and BAY2353 (Niclosamide, inhibiting STAT3), SGC-CBP30 (potent CREBBP/EP300 inhibitor), and ulixertinib (ERK1/ERK2 inhibitor). Human EGF protein and FGF ligands including FGF1, FGF2, FGF4, FGF7, FGF9, FGF8a, FG19 and FGF21 were purchased from PeproTech. The breast cancer cell lines CAMA1, MDA-MB-134, MCF7, and T47D were obtained from the American Type Culture Collection (ATCC). The CAMA1 and MCF7 cell lines were grown in DMEM with a 10% FBS and 1% antibiotic-antimycotic solution, while T47D and MDA-MB-134 were cultured in RPMI with 10% FBS and 1% antibiotic-antimycotic solution. Regular testing for mycoplasma contamination was conducted using the commercially available Myco Alert kit from Lonza. All cell lines utilized in this research have undergone authentication by ATCC, and only cells with a low number of passages were employed in experiments to ensure work confidence.
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5

Western Blot Analysis of Protein Signaling

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Lysates were collected in radioimmunoprecipitation assay buffer [RIPA; 50 mM Tris-HCl (pH 8.0), 150 mM NaCl, 1% TritionX-100, 0.5% sodium deoxycholate, 0.1% SDS, 50 mM NaF, 1 mM sodium orthovanadate, 1 mM PMSF, and 10 μg/mL aprotinin]. 25 μg or 30 μg of total protein was separated by 10% or 12.5% SDS-PAGE followed by transfer to Immobilon-P membrane. Immunoblotting reagents were from the following sources: antibodies against p-FGFR (Tyr653/654), FGFR1 (D8E4), FGFR4 (D3B12), p-VEGFR (19A10), VEGFR2 (55B11), p-AKT (D9E), AKT (9272), p-MAPK (D13.14.4E), p44/42 MAPK (Erk1/2), OCT4 (2750), CD133 (D2V8Q), Androgen Receptor (D6F11), and β-actin (4967) antibodies were from Cell Signaling Technology; FGFR2 (C-8), FGFR3 (B-9), and STAT5 (C-17) were from Santa Cruz Biotechnology; ALDH7A1 (CAT:ABO11656) was from Abgent; HRP anti-mouse, HRP anti-rabbit, and Enhanced Chemiluminescence (ECL) reagents were from GE Healthcare. Other reagents included: Dovitinib, BGJ398 and PD166866 were from Selleckchem.
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6

Cardioprotective Effects of AMPK Activation

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H9C2 cells (Chinese Academy of Sciences Cell Bank, Shanghai, China) were cultured in high glucose DMEM (GIBCO, USA) supplemented with 1% cyan streptomycin double-antibody and 10% (v/v) FB Sat 37°C under a 5% CO2 atmosphere. For the present study, H9C2 cells were incubated overnight to reach 70-80% confluence at 37°C before experimentation. H9C2 cells were treated with H2O2 at a concentration of 100 μM for 4 hours to construct an apoptosis model [26 (link)]. AMPK was activated after exercise [27 (link)], so AICAR, an AMPK agonist, was used to simulate the exercise effect of H9C2 cells. Furthermore, H9C2 cells were treated with recombinant human FGF21 (rhFGF21, 75 ng/ml, 15 h; Selleck, USA), FGFR1 inhibitor (PD166866, 100 ng/ml, 15 h, Selleck Chemicals) [8 (link)], PI3K inhibitor (LY294002, 10 μM, 1 h, Selleck Chemicals), AICAR (1 mM, 1 h, Selleck Chemicals) [28 (link)], and lentiviral vectors carrying alcat1 gene (ALCAT1 OE, MOI = 1; Brain VTA, China).
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7

Evaluating Small Molecule Inhibitors

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Mouse FGF2 is a recombinant protein purchased from Prospec (CYT-386). Fresh powder for confirmation was ordered from the NCI’s DTP or from Caymen Chemical. Picropodophyllin and fluvastatin were obtained from the DTP (Fig. 2). Fluvastatin (10010337), simvastatin (MK-733), rosuvastatin (ZD 4522), pravastatin (10010342), atorvastatin (10493), cycloheximide (14126), and mitomycin C (11435) were ordered from Caymen Chemical. PD166866 (S8493) and NVP-ADW742 (S1088) was purchased from SelleckChem. eBioscience™ Cell Proliferation Dye eFluor™ 450 (65-0842-85) and SYTOX™ Red Dead Cell Stain, for 633 or 635 nm (S34859) were purchased from ThermoFisher. I-BET-762 was purchased from JSTAR Research Inc.
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